Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:22:04 (10857): wrapper (7.7.26015): starting
17:22:04 (10857): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 17:22:04] Arguments: --nthreads 12
[2026-01-09 17:22:04] Threads: 12
[2026-01-09 17:22:04] Checking for CVMFS
[2026-01-09 17:22:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:22:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:22:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:22:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:22:05] 2.11.2.0 3165 137256 99628 154959 2 56 14462717 20275201 1 130560 0 51165117 99.889 8140737 40754 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:22:05] CVMFS is ok
[2026-01-09 17:22:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:22:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:22:05] Further information can be found at the LHC@home message board.
[2026-01-09 17:22:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:22:05] Checking for apptainer binary...
[2026-01-09 17:22:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:22:05] Running /usr/bin/apptainer --version
[2026-01-09 17:22:05] apptainer version 1.3.2-1.el7
[2026-01-09 17:22:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:22:06] c-115-40.aglt2.org
[2026-01-09 17:22:06] apptainer works
[2026-01-09 17:22:06] Set ATHENA_PROC_NUMBER=12
[2026-01-09 17:22:06] Set ATHENA_CORE_NUMBER=12
[2026-01-09 17:22:06] Starting ATLAS job with PandaID=6963168884
[2026-01-09 17:22:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:55:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:55:44]  status=None
[2026-01-09 18:55:44]  status_code=0
[2026-01-09 18:55:44]  storage_token=
[2026-01-09 18:55:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963168884/log.47898826._036411.job.log.tgz.1
[2026-01-09 18:55:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/0e/log.47898826._036411.job.log.tgz.1
[2026-01-09 18:55:44]  workdir=None
[2026-01-09 18:55:44] ]
[2026-01-09 18:55:44] 2026-01-09 23:55:01,446 | INFO     | transferring file log.47898826._036411.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963168884/log.47898826._036411.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 18:55:44] 2026-01-09 23:55:01,446 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963168884/log.47898826._036411.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._036411.job
[2026-01-09 18:55:44] 2026-01-09 23:55:01,468 | INFO     | adding to output.list: log.47898826._036411.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/0e/log.47898826._036411.job.log.tg
[2026-01-09 18:55:44] 2026-01-09 23:55:01,469 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 18:55:44] 2026-01-09 23:55:01,469 | INFO     | summary of transferred files:
[2026-01-09 18:55:44] 2026-01-09 23:55:01,469 | INFO     |  -- lfn=log.47898826._036411.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 18:55:44] 2026-01-09 23:55:01,470 | INFO     | stage-out finished correctly
[2026-01-09 18:55:44] 2026-01-09 23:55:02,338 | INFO     | monitor loop #416: job 0:6963168884 is in state 'finished'
[2026-01-09 18:55:44] 2026-01-09 23:55:02,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:44] 2026-01-09 23:55:03,113 | INFO     | time since job start (5562s) is within the limit (349056.0s)
[2026-01-09 18:55:44] 2026-01-09 23:55:04,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 18:55:44] 2026-01-09 23:55:04,842 | INFO     | monitor loop #417: job 0:6963168884 is in state 'finished'
[2026-01-09 18:55:44] 2026-01-09 23:55:04,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:44] 2026-01-09 23:55:05,114 | INFO     | time since job start (5564s) is within the limit (349056.0s)
[2026-01-09 18:55:44] 2026-01-09 23:55:06,800 | INFO     | job 6963168884 has state=finished
[2026-01-09 18:55:44] 2026-01-09 23:55:06,800 | INFO     | preparing for final server update for job 6963168884 in state='finished'
[2026-01-09 18:55:44] 2026-01-09 23:55:06,857 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-09 18:55:44] 2026-01-09 23:55:06,857 | INFO     | this job has now completed (state=finished)
[2026-01-09 18:55:44] 2026-01-09 23:55:06,857 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 18:55:44] 2026-01-09 23:55:06,857 | INFO     | log transfer has been attempted: DONE
[2026-01-09 18:55:44] 2026-01-09 23:55:06,857 | INFO     | job 6963168884 has finished - writing final server update
[2026-01-09 18:55:44] 2026-01-09 23:55:06,858 | INFO     | total number of processed events: 400 (read)
[2026-01-09 18:55:44] 2026-01-09 23:55:06,859 | INFO     | executing command: lscpu
[2026-01-09 18:55:44] 2026-01-09 23:55:06,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 18:55:44] 2026-01-09 23:55:07,120 | INFO     | time since job start (5566s) is within the limit (349056.0s)
[2026-01-09 18:55:44] 2026-01-09 23:55:07,359 | INFO     | monitor loop #418: job 0:6963168884 is in state 'finished'
[2026-01-09 18:55:44] 2026-01-09 23:55:07,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:44] 2026-01-09 23:55:09,126 | INFO     | time since job start (5568s) is within the limit (349056.0s)
[2026-01-09 18:55:44] 2026-01-09 23:55:09,862 | INFO     | monitor loop #419: job 0:6963168884 is in state 'finished'
[2026-01-09 18:55:44] 2026-01-09 23:55:09,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,131 | INFO     | time since job start (5570s) is within the limit (349056.0s)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,456 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:55:44] 2026-01-09 23:55:11,460 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2026-01-09 18:55:44] 2026-01-09 23:55:11,463 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963168884/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,464 | INFO     | extracted standard info from prmon json
[2026-01-09 18:55:44] 2026-01-09 23:55:11,464 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:55:44] 2026-01-09 23:55:11,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:55:44] 2026-01-09 23:55:11,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:55:44] 2026-01-09 23:55:11,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:55:44] 2026-01-09 23:55:11,466 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:55:44] 2026-01-09 23:55:11,466 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,466 | INFO     | sum of deviations: -11785089529.0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,466 | INFO     | mean x: 1768000205.5
[2026-01-09 18:55:44] 2026-01-09 23:55:11,466 | INFO     | mean y: 2819817.3571428573
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | intersect: 113389089908.07224
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | chi2: 0.1390726865299141
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | current memory leak: -64.13 B/s (using 84 data points, chi2=0.14)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | could have reported an average CPU frequency of 2147 MHz (7 samples)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | ..............................
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | . Timing measurements:
[2026-01-09 18:55:44] 2026-01-09 23:55:11,467 | INFO     | . get job = 0 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | . initial setup = 2 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | . payload setup = 6 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | . stage-in = 0 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | . payload execution = 5533 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | . stage-out = 0 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | . log creation = 0 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,468 | INFO     | ..............................
[2026-01-09 18:55:44] 2026-01-09 23:55:11,882 | INFO     | 
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | job summary report
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | --------------------------------------------------
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | PanDA job id: 6963168884
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | task id: 47898826
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | errors: (none)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | pilot state: finished 
[2026-01-09 18:55:44] 2026-01-09 23:55:11,883 | INFO     | transexitcode: 0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,884 | INFO     | exeerrorcode: 0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,884 | INFO     | exeerrordiag: 
[2026-01-09 18:55:44] 2026-01-09 23:55:11,884 | INFO     | exitcode: 0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,884 | INFO     | exitmsg: OK
[2026-01-09 18:55:44] 2026-01-09 23:55:11,884 | INFO     | cpuconsumptiontime: 60245 s
[2026-01-09 18:55:44] 2026-01-09 23:55:11,884 | INFO     | nevents: 400
[2026-01-09 18:55:44] 2026-01-09 23:55:11,885 | INFO     | neventsw: 0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,885 | INFO     | pid: 21949
[2026-01-09 18:55:44] 2026-01-09 23:55:11,885 | INFO     | pgrp: 21949
[2026-01-09 18:55:44] 2026-01-09 23:55:11,885 | INFO     | corecount: 12
[2026-01-09 18:55:44] 2026-01-09 23:55:11,885 | INFO     | event service: False
[2026-01-09 18:55:44] 2026-01-09 23:55:11,885 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 5543: 2310845, 5544: 2319843, 5547: 2319899, 5554: 2320221}
[2026-01-09 18:55:44] 2026-01-09 23:55:11,886 | INFO     | --------------------------------------------------
[2026-01-09 18:55:44] 2026-01-09 23:55:11,886 | INFO     | 
[2026-01-09 18:55:44] 2026-01-09 23:55:11,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 18:55:44] 2026-01-09 23:55:11,955 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,959 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:55:44] 2026-01-09 23:55:11,959 | INFO     | job 6963168884 has completed (purged errors)
[2026-01-09 18:55:44] 2026-01-09 23:55:11,959 | INFO     | overall cleanup function is called
[2026-01-09 18:55:44] 2026-01-09 23:55:12,967 | INFO     | --- collectZombieJob: --- 10, [21949]
[2026-01-09 18:55:44] 2026-01-09 23:55:12,967 | INFO     | zombie collector waiting for pid 21949
[2026-01-09 18:55:44] 2026-01-09 23:55:12,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:55:44] 2026-01-09 23:55:12,968 | INFO     | collected zombie processes
[2026-01-09 18:55:44] 2026-01-09 23:55:12,968 | INFO     | will attempt to kill all subprocesses of pid=21949
[2026-01-09 18:55:44] 2026-01-09 23:55:13,054 | INFO     | process IDs to be killed: [21949] (in reverse order)
[2026-01-09 18:55:44] 2026-01-09 23:55:13,102 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:55:44] 2026-01-09 23:55:13,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:55:44] 2026-01-09 23:55:13,105 | INFO     | did not find any defunct processes belonging to 21949
[2026-01-09 18:55:44] 2026-01-09 23:55:13,108 | INFO     | did not find any defunct processes belonging to 21949
[2026-01-09 18:55:44] 2026-01-09 23:55:13,109 | INFO     | ready for new job
[2026-01-09 18:55:44] 2026-01-09 23:55:13,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:55:44] 2026-01-09 23:55:13,110 | INFO     | ***************************************
[2026-01-09 18:55:44] 2026-01-09 23:55:13,110 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:55:44] 2026-01-09 23:55:13,110 | INFO     | ***************************************
[2026-01-09 18:55:44] 2026-01-09 23:55:13,111 | INFO     | 
[2026-01-09 18:55:44] 2026-01-09 23:55:13,111 | INFO     | architecture information:
[2026-01-09 18:55:44] 2026-01-09 23:55:13,112 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:55:44] 2026-01-09 23:55:13,127 | INFO     | cat /etc/os-release:
[2026-01-09 18:55:44] NAME="CentOS Linux"
[2026-01-09 18:55:44] VERSION="7 (Core)"
[2026-01-09 18:55:44] ID="centos"
[2026-01-09 18:55:44] ID_LIKE="rhel fedora"
[2026-01-09 18:55:44] VERSION_ID="7"
[2026-01-09 18:55:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:55:44] ANSI_COLOR="0;31"
[2026-01-09 18:55:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:55:44] HOME_URL="https://www.centos.org/"
[2026-01-09 18:55:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:55:44] 
[2026-01-09 18:55:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:55:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:55:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:55:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:55:44] 
[2026-01-09 18:55:44] 2026-01-09 23:55:13,127 | INFO     | ***************************************
[2026-01-09 18:55:44] 2026-01-09 23:55:13,630 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 18:55:44] 2026-01-09 23:55:13,647 | INFO     | sufficient remaining disk space (18656264192 B)
[2026-01-09 18:55:44] 2026-01-09 23:55:13,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:55:44] 2026-01-09 23:55:13,648 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:55:44] 2026-01-09 23:55:13,648 | INFO     | update_server=False
[2026-01-09 18:55:44] 2026-01-09 23:55:13,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:55:44] 2026-01-09 23:55:13,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:55:44] 2026-01-09 23:55:13,648 | INFO     | aborting loop
[2026-01-09 18:55:44] 2026-01-09 23:55:13,918 | INFO     | all data control threads have been joined
[2026-01-09 18:55:44] 2026-01-09 23:55:14,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:55:44] 2026-01-09 23:55:14,653 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:14,654 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:14,722 | INFO     | all job control threads have been joined
[2026-01-09 18:55:44] 2026-01-09 23:55:14,747 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:14,865 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:14,898 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:14,923 | INFO     | [data] control thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:15,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:55:44] 2026-01-09 23:55:15,070 | INFO     | all payload control threads have been joined
[2026-01-09 18:55:44] 2026-01-09 23:55:15,433 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:15,614 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:15,727 | INFO     | [job] control thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:15,914 | INFO     | [job] validate thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:16,075 | INFO     | [payload] control thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:16,176 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:16,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:55:44] 2026-01-09 23:55:16,566 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:17,556 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:19,049 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:23,834 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:55:44] 2026-01-09 23:55:24,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:55:44] 2026-01-09 23:55:29,616 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:55:44] 2026-01-09 23:55:31,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726977034048)>', '<ExcThread(monitor, started 139726526854912)>']
[2026-01-09 18:55:44] 2026-01-09 23:55:36,723 | INFO     | all workflow threads have been joined
[2026-01-09 18:55:44] 2026-01-09 23:55:36,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:55:44] 2026-01-09 23:55:36,724 | INFO     | traces error code: 0
[2026-01-09 18:55:44] 2026-01-09 23:55:36,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:55:44] 2026-01-09 23:55:44,333 | INFO     | PID=14546 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:55:44] 2026-01-09 23:55:44,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:55:44] 2026-01-09 23:55:44,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:55:44] 2026-01-09 23:55:44,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:55:44] 2026-01-09 23:55:44,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:55:44] 2026-01-09 23:55:44,334 | INFO     | [monitor] control thread has ended
[2026-01-09 18:55:44] 2026-01-09 23:55:44,415 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:55:44] 2026-01-09 23:55:44,420 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:55:44] 2026-01-09 23:55:44,423 [wrapper] pilotpid: 14546
[2026-01-09 18:55:44] 2026-01-09 23:55:44,427 [wrapper] Pilot exit status: 0
[2026-01-09 18:55:44] 2026-01-09 23:55:44,442 [wrapper] pandaids: 6963168884
[2026-01-09 18:55:44] 2026-01-09 23:55:44,477 [wrapper] cleanup supervisor_pilot 32395 14547
[2026-01-09 18:55:44] 2026-01-09 23:55:44,480 [wrapper] Test setup, not cleaning
[2026-01-09 18:55:44] 2026-01-09 23:55:44,484 [wrapper] apfmon messages muted
[2026-01-09 18:55:44] 2026-01-09 23:55:44,488 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:55:44] 2026-01-09 23:55:44,492 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:55:44]  *** Error codes and diagnostics ***
[2026-01-09 18:55:44]     "exeErrorCode": 0,
[2026-01-09 18:55:44]     "exeErrorDiag": "",
[2026-01-09 18:55:44]     "pilotErrorCode": 0,
[2026-01-09 18:55:44]     "pilotErrorDiag": "",
[2026-01-09 18:55:44]  *** Listing of results directory ***
[2026-01-09 18:55:44] total 438776
[2026-01-09 18:55:44] -rwx------ 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas       100 Jan  9 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:55:44] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 17:22 run_atlas
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas       105 Jan  9 17:22 job.xml
[2026-01-09 18:55:44] -rw-r--r-- 2 boincer umatlas 224535390 Jan  9 17:22 EVNT.47898824._001395.pool.root.1
[2026-01-09 18:55:44] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:22 start_atlas.sh
[2026-01-09 18:55:44] drwxrwx--x 2 boincer umatlas      4096 Jan  9 17:22 shared
[2026-01-09 18:55:44] -rw-r--r-- 2 boincer umatlas    592406 Jan  9 17:22 input.tar.gz
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas         0 Jan  9 17:22 boinc_lockfile
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 17:22 pandaJob.out
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas        57 Jan  9 17:22 setup.sh.local
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas    989375 Jan  9 17:22 agis_schedconf.cvmfs.json
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas   1516240 Jan  9 17:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:55:44] drwx------ 5 boincer umatlas      4096 Jan  9 17:22 pilot3
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 18:47 init_data.xml
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas 218460250 Jan  9 18:54 HITS.47898826._036411.pool.root.1
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas      1047 Jan  9 18:54 memory_monitor_summary.json
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas    398532 Jan  9 18:55 log.47898826._036411.job.log.tgz.1
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas       529 Jan  9 18:55 boinc_task_state.xml
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas      7855 Jan  9 18:55 heartbeat.json
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas        27 Jan  9 18:55 wrapper_checkpoint.txt
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:55 boinc_mmap_file
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas       745 Jan  9 18:55 pilotlog.txt
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas        95 Jan  9 18:55 pilot_heartbeat.json
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas    798296 Jan  9 18:55 log.47898826._036411.job.log.1
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas       357 Jan  9 18:55 output.list
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:55 runtime_log
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas   1218560 Jan  9 18:55 result.tar.gz
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 18:55 runtime_log.err
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas       659 Jan  9 18:55 bXfNDmZ3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtngKDmbYUX9m.diag
[2026-01-09 18:55:44] -rw-r--r-- 1 boincer umatlas     22051 Jan  9 18:55 stderr.txt
[2026-01-09 18:55:44] HITS file was successfully produced:
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas 218460250 Jan  9 18:54 shared/HITS.pool.root.1
[2026-01-09 18:55:44]  *** Contents of shared directory: ***
[2026-01-09 18:55:44] total 434412
[2026-01-09 18:55:44] -rw-r--r-- 2 boincer umatlas 224535390 Jan  9 17:22 ATLAS.root_0
[2026-01-09 18:55:44] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:22 start_atlas.sh
[2026-01-09 18:55:44] -rw-r--r-- 2 boincer umatlas    592406 Jan  9 17:22 input.tar.gz
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas 218460250 Jan  9 18:54 HITS.pool.root.1
[2026-01-09 18:55:44] -rw------- 1 boincer umatlas   1218560 Jan  9 18:55 result.tar.gz
18:55:45 (10857): run_atlas exited; CPU time 60195.607597
18:55:45 (10857): called boinc_finish(0)

</stderr_txt>
]]>

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