Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:24:53 (29095): wrapper (7.7.26015): starting
05:24:53 (29095): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 05:24:53] Arguments: --nthreads 8
[2026-01-10 05:24:53] Threads: 8
[2026-01-10 05:24:53] Checking for CVMFS
[2026-01-10 05:24:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:24:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:24:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:24:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:24:55] 2.11.2.0 10325 36370 122716 154968 2 62 17102320 25165824 899 130560 0 15531307 99.829 10151552 3991 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 05:24:55] CVMFS is ok
[2026-01-10 05:24:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:24:55] Checking for apptainer binary...
[2026-01-10 05:24:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:24:55] Running /usr/bin/apptainer --version
[2026-01-10 05:24:56] apptainer version 1.3.2-1.el7
[2026-01-10 05:24:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:25:18] cg-vwn405.simple-grid.lan
[2026-01-10 05:25:18] apptainer works
[2026-01-10 05:25:18] Set ATHENA_PROC_NUMBER=8
[2026-01-10 05:25:18] Set ATHENA_CORE_NUMBER=8
[2026-01-10 05:25:18] Starting ATLAS job with PandaID=6963381424
[2026-01-10 05:25:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 08:28:26]  *** The last 200 lines of the pilot log: ***
[2026-01-11 08:28:26] 2026-01-11 07:27:37,458 | INFO     | monitor loop #6530: job 0:6963381424 is in state 'finished'
[2026-01-11 08:28:26] 2026-01-11 07:27:37,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:28:26] 2026-01-11 07:27:39,169 | INFO     | time since job start (97106s) is within the limit (349056.0s)
[2026-01-11 08:28:26] 2026-01-11 07:27:39,966 | INFO     | monitor loop #6531: job 0:6963381424 is in state 'finished'
[2026-01-11 08:28:26] 2026-01-11 07:27:39,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:28:26] 2026-01-11 07:27:41,182 | INFO     | time since job start (97108s) is within the limit (349056.0s)
[2026-01-11 08:28:26] 2026-01-11 07:27:42,475 | INFO     | monitor loop #6532: job 0:6963381424 is in state 'finished'
[2026-01-11 08:28:26] 2026-01-11 07:27:42,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:28:26] 2026-01-11 07:27:43,195 | INFO     | time since job start (97110s) is within the limit (349056.0s)
[2026-01-11 08:28:26] 2026-01-11 07:27:44,980 | INFO     | monitor loop #6533: job 0:6963381424 is in state 'finished'
[2026-01-11 08:28:26] 2026-01-11 07:27:44,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:28:26] 2026-01-11 07:27:45,206 | INFO     | time since job start (97112s) is within the limit (349056.0s)
[2026-01-11 08:28:26] 2026-01-11 07:27:46,359 | INFO     | PID=370 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-11 08:28:26] 2026-01-11 07:27:46,359 | INFO     | .. there are 2 such processes running
[2026-01-11 08:28:26] 2026-01-11 07:27:47,158 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 08:28:26] 2026-01-11 07:27:47,159 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 08:28:26] 2026-01-11 07:27:47,161 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963381424/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,162 | INFO     | extracted standard info from prmon json
[2026-01-11 08:28:26] 2026-01-11 07:27:47,162 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 08:28:26] 2026-01-11 07:27:47,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 08:28:26] 2026-01-11 07:27:47,202 | INFO     | fitting pss+swap vs Time
[2026-01-11 08:28:26] 2026-01-11 07:27:47,204 | INFO     | sum of square deviations: 1225387346799.9255
[2026-01-11 08:28:26] 2026-01-11 07:27:47,288 | INFO     | sum of deviations: 4396680062180.322
[2026-01-11 08:28:26] 2026-01-11 07:27:47,288 | INFO     | mean x: 1768068134.061986
[2026-01-11 08:28:26] 2026-01-11 07:27:47,288 | INFO     | mean y: 2809177.853889943
[2026-01-11 08:28:26] 2026-01-11 07:27:47,288 | INFO     | intersect: -6341005236.345323
[2026-01-11 08:28:26] 2026-01-11 07:27:47,290 | INFO     | chi2: 30.72568872113979
[2026-01-11 08:28:26] 2026-01-11 07:27:47,293 | INFO     | sum of square deviations: 1213798506709.271
[2026-01-11 08:28:26] 2026-01-11 07:27:47,368 | INFO     | sum of deviations: 4924923093261.248
[2026-01-11 08:28:26] 2026-01-11 07:27:47,369 | INFO     | mean x: 1768067981.5653553
[2026-01-11 08:28:26] 2026-01-11 07:27:47,369 | INFO     | mean y: 2816128.7112944163
[2026-01-11 08:28:26] 2026-01-11 07:27:47,369 | INFO     | intersect: -7171025975.011664
[2026-01-11 08:28:26] 2026-01-11 07:27:47,371 | INFO     | chi2: 27.36999988059722
[2026-01-11 08:28:26] 2026-01-11 07:27:47,371 | INFO     | current chi2=27.36999988059722 (change=10.921443847843838 %)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,371 | INFO     | right removable region: 1575
[2026-01-11 08:28:26] 2026-01-11 07:27:47,374 | INFO     | sum of square deviations: 1213797482519.269
[2026-01-11 08:28:26] 2026-01-11 07:27:47,388 | INFO     | time since job start (97114s) is within the limit (349056.0s)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,467 | INFO     | sum of deviations: 3724834062902.9727
[2026-01-11 08:28:26] 2026-01-11 07:27:47,468 | INFO     | mean x: 1768068286.5653553
[2026-01-11 08:28:26] 2026-01-11 07:27:47,468 | INFO     | mean y: 2818018.116751269
[2026-01-11 08:28:26] 2026-01-11 07:27:47,468 | INFO     | intersect: -5422931395.754339
[2026-01-11 08:28:26] 2026-01-11 07:27:47,470 | INFO     | chi2: 25.73101931491682
[2026-01-11 08:28:26] 2026-01-11 07:27:47,470 | INFO     | current chi2=25.73101931491682 (change=16.2556792511751 %)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,471 | INFO     | left removable region: 10
[2026-01-11 08:28:26] 2026-01-11 07:27:47,473 | INFO     | sum of square deviations: 1188558711705.6924
[2026-01-11 08:28:26] 2026-01-11 07:27:47,494 | INFO     | monitor loop #6534: job 0:6963381424 is in state 'finished'
[2026-01-11 08:28:26] 2026-01-11 07:27:47,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,563 | INFO     | sum of deviations: 3755274241628.0537
[2026-01-11 08:28:26] 2026-01-11 07:27:47,564 | INFO     | mean x: 1768068256.0728436
[2026-01-11 08:28:26] 2026-01-11 07:27:47,564 | INFO     | mean y: 2834717.78913738
[2026-01-11 08:28:26] 2026-01-11 07:27:47,564 | INFO     | intersect: -5583411139.550266
[2026-01-11 08:28:26] 2026-01-11 07:27:47,566 | INFO     | chi2: 17.503060125710064
[2026-01-11 08:28:26] 2026-01-11 07:27:47,567 | INFO     | current memory leak: 3.16 B/s (using 1565 data points, chi2=17.50)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | could have reported an average CPU frequency of 1999 MHz (53 samples)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | ..............................
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | . Timing measurements:
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | . get job = 0 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | . initial setup = 8 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | . payload setup = 192 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,569 | INFO     | . stage-in = 0 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,570 | INFO     | . payload execution = 96579 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,570 | INFO     | . stage-out = 6 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,570 | INFO     | . log creation = 2 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,570 | INFO     | ..............................
[2026-01-11 08:28:26] 2026-01-11 07:27:47,709 | INFO     | 
[2026-01-11 08:28:26] 2026-01-11 07:27:47,709 | INFO     | job summary report
[2026-01-11 08:28:26] 2026-01-11 07:27:47,709 | INFO     | --------------------------------------------------
[2026-01-11 08:28:26] 2026-01-11 07:27:47,709 | INFO     | PanDA job id: 6963381424
[2026-01-11 08:28:26] 2026-01-11 07:27:47,709 | INFO     | task id: 47962010
[2026-01-11 08:28:26] 2026-01-11 07:27:47,709 | INFO     | errors: (none)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | pilot state: finished 
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | transexitcode: 0
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | exeerrorcode: 0
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | exeerrordiag: 
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | exitcode: 0
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | exitmsg: OK
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | cpuconsumptiontime: 360653 s
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | nevents: 900
[2026-01-11 08:28:26] 2026-01-11 07:27:47,710 | INFO     | neventsw: 0
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | pid: 6900
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | pgrp: 6900
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | corecount: 8
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | event service: False
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | sizes: {0: 2284395, 1: 2284479, 2: 2284678, 12: 2284678, 23: 2284706, 34: 2284734, 45: 2284890, 55: 2284918, 66: 2284946, 77: 2284974, 88: 2285030, 98: 2285338, 10
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | --------------------------------------------------
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | 
[2026-01-11 08:28:26] 2026-01-11 07:27:47,711 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-11 08:28:26] 2026-01-11 07:27:47,993 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,993 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,993 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,993 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | job 6963381424 has completed (purged errors)
[2026-01-11 08:28:26] 2026-01-11 07:27:47,995 | INFO     | overall cleanup function is called
[2026-01-11 08:28:26] 2026-01-11 07:27:49,012 | INFO     | --- collectZombieJob: --- 10, [6900]
[2026-01-11 08:28:26] 2026-01-11 07:27:49,013 | INFO     | zombie collector waiting for pid 6900
[2026-01-11 08:28:26] 2026-01-11 07:27:49,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 08:28:26] 2026-01-11 07:27:49,013 | INFO     | collected zombie processes
[2026-01-11 08:28:26] 2026-01-11 07:27:49,013 | INFO     | will attempt to kill all subprocesses of pid=6900
[2026-01-11 08:28:26] 2026-01-11 07:27:49,094 | INFO     | process IDs to be killed: [6900] (in reverse order)
[2026-01-11 08:28:26] 2026-01-11 07:27:49,778 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 08:28:26] 2026-01-11 07:27:49,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 08:28:26] 2026-01-11 07:27:49,781 | INFO     | did not find any defunct processes belonging to 6900
[2026-01-11 08:28:26] 2026-01-11 07:27:49,782 | INFO     | did not find any defunct processes belonging to 6900
[2026-01-11 08:28:26] 2026-01-11 07:27:49,783 | INFO     | ready for new job
[2026-01-11 08:28:26] 2026-01-11 07:27:49,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 08:28:26] 2026-01-11 07:27:49,788 | INFO     | ***************************************
[2026-01-11 08:28:26] 2026-01-11 07:27:49,789 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 08:28:26] 2026-01-11 07:27:49,789 | INFO     | ***************************************
[2026-01-11 08:28:26] 2026-01-11 07:27:49,789 | INFO     | 
[2026-01-11 08:28:26] 2026-01-11 07:27:49,789 | INFO     | pilot is running in a VM
[2026-01-11 08:28:26] 2026-01-11 07:27:49,790 | INFO     | architecture information:
[2026-01-11 08:28:26] 2026-01-11 07:27:49,796 | INFO     | executing command: cat /etc/os-release
[2026-01-11 08:28:26] 2026-01-11 07:27:49,984 | INFO     | cat /etc/os-release:
[2026-01-11 08:28:26] NAME="CentOS Linux"
[2026-01-11 08:28:26] VERSION="7 (Core)"
[2026-01-11 08:28:26] ID="centos"
[2026-01-11 08:28:26] ID_LIKE="rhel fedora"
[2026-01-11 08:28:26] VERSION_ID="7"
[2026-01-11 08:28:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 08:28:26] ANSI_COLOR="0;31"
[2026-01-11 08:28:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 08:28:26] HOME_URL="https://www.centos.org/"
[2026-01-11 08:28:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 08:28:26] 
[2026-01-11 08:28:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 08:28:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 08:28:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 08:28:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 08:28:26] 
[2026-01-11 08:28:26] 2026-01-11 07:27:49,984 | INFO     | ***************************************
[2026-01-11 08:28:26] 2026-01-11 07:27:50,487 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-11 08:28:26] 2026-01-11 07:27:50,677 | INFO     | sufficient remaining disk space (495780364288 B)
[2026-01-11 08:28:26] 2026-01-11 07:27:50,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 08:28:26] 2026-01-11 07:27:50,678 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 08:28:26] 2026-01-11 07:27:50,678 | INFO     | update_server=False
[2026-01-11 08:28:26] 2026-01-11 07:27:50,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 08:28:26] 2026-01-11 07:27:51,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:28:26] 2026-01-11 07:27:51,006 | INFO     | aborting loop
[2026-01-11 08:28:26] 2026-01-11 07:27:51,209 | INFO     | all data control threads have been joined
[2026-01-11 08:28:26] 2026-01-11 07:27:51,634 | INFO     | all job control threads have been joined
[2026-01-11 08:28:26] 2026-01-11 07:27:51,685 | INFO     | [job] retrieve thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:51,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 08:28:26] 2026-01-11 07:27:51,735 | INFO     | [payload] failed_post thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:51,913 | INFO     | all payload control threads have been joined
[2026-01-11 08:28:26] 2026-01-11 07:27:52,011 | INFO     | [job] job monitor thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,215 | INFO     | [data] control thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,294 | INFO     | [job] validate thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,459 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,627 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,640 | INFO     | [job] control thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:28:26] 2026-01-11 07:27:52,741 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,868 | INFO     | [payload] validate_post thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,919 | INFO     | [payload] control thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:52,982 | INFO     | [data] copytool_in thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:53,049 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:53,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 08:28:26] 2026-01-11 07:27:53,733 | INFO     | [job] queue monitor thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:53,737 | INFO     | [data] copytool_out thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:27:57,391 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 08:28:26] 2026-01-11 07:28:02,969 | INFO     | [monitor] cgroup control has ended
[2026-01-11 08:28:26] 2026-01-11 07:28:04,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141400168256)>', '<ExcThread(monitor, started 140140680832768)>']
[2026-01-11 08:28:26] 2026-01-11 07:28:10,000 | INFO     | all workflow threads have been joined
[2026-01-11 08:28:26] 2026-01-11 07:28:10,001 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 08:28:26] 2026-01-11 07:28:10,001 | INFO     | traces error code: 0
[2026-01-11 08:28:26] 2026-01-11 07:28:10,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 08:28:26] 2026-01-11 07:28:20,528 | INFO     | PID=370 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-11 08:28:26] 2026-01-11 07:28:20,528 | INFO     | .. there are 2 such processes running
[2026-01-11 08:28:26] 2026-01-11 07:28:20,529 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 08:28:26] 2026-01-11 07:28:20,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 08:28:26] 2026-01-11 07:28:20,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 08:28:26] 2026-01-11 07:28:20,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 08:28:26] 2026-01-11 07:28:20,529 | INFO     | [monitor] control thread has ended
[2026-01-11 08:28:26] 2026-01-11 07:28:21,055 [wrapper] ==== pilot stdout END ====
[2026-01-11 08:28:26] 2026-01-11 07:28:21,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 08:28:26] 2026-01-11 07:28:21,209 [wrapper] pilotpid: 370
[2026-01-11 08:28:26] 2026-01-11 07:28:21,230 [wrapper] Pilot exit status: 0
[2026-01-11 08:28:26] 2026-01-11 07:28:21,706 [wrapper] pandaids: 6963381424
[2026-01-11 08:28:26] 2026-01-11 07:28:22,924 [wrapper] cleanup supervisor_pilot 24845 371
[2026-01-11 08:28:26] 2026-01-11 07:28:23,016 [wrapper] Test setup, not cleaning
[2026-01-11 08:28:26] 2026-01-11 07:28:23,146 [wrapper] apfmon messages muted
[2026-01-11 08:28:26] 2026-01-11 07:28:23,281 [wrapper] ==== wrapper stdout END ====
[2026-01-11 08:28:26] 2026-01-11 07:28:23,405 [wrapper] ==== wrapper stderr END ====
[2026-01-11 08:28:26]  *** Error codes and diagnostics ***
[2026-01-11 08:28:26]     "exeErrorCode": 0,
[2026-01-11 08:28:26]     "exeErrorDiag": "",
[2026-01-11 08:28:26]     "pilotErrorCode": 0,
[2026-01-11 08:28:26]     "pilotErrorDiag": "",
[2026-01-11 08:28:26]  *** Listing of results directory ***
[2026-01-11 08:28:26] total 1201020
[2026-01-11 08:28:26] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc       100 Jan 10 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 08:28:26] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 05:24 run_atlas
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc       105 Jan 10 05:24 job.xml
[2026-01-11 08:28:26] -rw-r--r--. 2 boinc boinc 393239145 Jan 10 05:24 EVNT.47962006._000029.pool.root.1
[2026-01-11 08:28:26] drwxrwx--x. 2 boinc boinc        68 Jan 10 05:24 shared
[2026-01-11 08:28:26] -rw-r--r--. 2 boinc boinc    592609 Jan 10 05:24 input.tar.gz
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc      6391 Jan 10 05:24 init_data.xml
[2026-01-11 08:28:26] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:24 start_atlas.sh
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc         0 Jan 10 05:24 boinc_lockfile
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc      2892 Jan 10 05:25 pandaJob.out
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc    989374 Jan 10 05:29 agis_schedconf.cvmfs.json
[2026-01-11 08:28:26] drwx------. 5 boinc boinc      4096 Jan 10 05:29 pilot3
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc       533 Jan 11 07:53 boinc_task_state.xml
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc 801655497 Jan 11 08:25 HITS.47962010._001557.pool.root.1
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc      1033 Jan 11 08:25 memory_monitor_summary.json
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc   1516240 Jan 11 08:25 agis_ddmendpoints.agis.ALL.json
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc   2590596 Jan 11 08:25 log.47962010._001557.job.log.tgz.1
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc        95 Jan 11 08:27 pilot_heartbeat.json
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc      8617 Jan 11 08:27 heartbeat.json
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc        29 Jan 11 08:27 wrapper_checkpoint.txt
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc      8192 Jan 11 08:27 boinc_mmap_file
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc       818 Jan 11 08:28 pilotlog.txt
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc  12933427 Jan 11 08:28 log.47962010._001557.job.log.1
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc       353 Jan 11 08:28 output.list
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc       620 Jan 11 08:28 runtime_log
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc  15544320 Jan 11 08:28 result.tar.gz
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc      8817 Jan 11 08:28 runtime_log.err
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc       662 Jan 11 08:28 QgTKDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDcmKDmRBZoGn.diag
[2026-01-11 08:28:26] -rw-r--r--. 1 boinc boinc     21397 Jan 11 08:28 stderr.txt
[2026-01-11 08:28:26] HITS file was successfully produced:
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc 801655497 Jan 11 08:25 shared/HITS.pool.root.1
[2026-01-11 08:28:26]  *** Contents of shared directory: ***
[2026-01-11 08:28:26] total 1182668
[2026-01-11 08:28:26] -rw-r--r--. 2 boinc boinc 393239145 Jan 10 05:24 ATLAS.root_0
[2026-01-11 08:28:26] -rw-r--r--. 2 boinc boinc    592609 Jan 10 05:24 input.tar.gz
[2026-01-11 08:28:26] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:24 start_atlas.sh
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc 801655497 Jan 11 08:25 HITS.pool.root.1
[2026-01-11 08:28:26] -rw-------. 1 boinc boinc  15544320 Jan 11 08:28 result.tar.gz
08:28:28 (29095): run_atlas exited; CPU time 361099.503961
08:28:28 (29095): called boinc_finish(0)

</stderr_txt>
]]>

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