Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:31:39 (978054): wrapper (7.7.26015): starting
19:31:39 (978054): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 19:31:39] Arguments: --nthreads 12
[2026-01-10 19:31:39] Threads: 12
[2026-01-10 19:31:39] Checking for CVMFS
[2026-01-10 19:31:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:31:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:31:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:31:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:31:39] 2.13.3.0 328575 794 67140 154999 1 61 3933855 6144001 917 130560 3 1924580 99.958 155390 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 19:31:39] CVMFS is ok
[2026-01-10 19:31:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:31:39] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 19:31:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 19:31:39] Further information can be found at the LHC@home message board.
[2026-01-10 19:31:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:31:39] Checking for apptainer binary...
[2026-01-10 19:31:39] apptainer is not installed, using version from CVMFS
[2026-01-10 19:31:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:31:41] XeonFire
[2026-01-10 19:31:41] apptainer works
[2026-01-10 19:31:41] Set ATHENA_PROC_NUMBER=12
[2026-01-10 19:31:41] Set ATHENA_CORE_NUMBER=12
[2026-01-10 19:31:41] Starting ATLAS job with PandaID=6963381384
[2026-01-10 19:31:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:44:41]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:44:41] 2026-01-11 06:43:38,845 | INFO     | time since job start (18690s) is within the limit (349056.0s)
[2026-01-11 00:44:41] 2026-01-11 06:43:38,899 | INFO     | monitor loop #1363: job 0:6963381384 is in state 'finished'
[2026-01-11 00:44:41] 2026-01-11 06:43:38,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,785 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 00:44:41] 2026-01-11 06:43:40,799 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2618.719556818182
[2026-01-11 00:44:41] 2026-01-11 06:43:40,813 | INFO     | using path: /var/lib/boinc-client/slots/15/PanDA_Pilot-6963381384/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,814 | INFO     | extracted standard info from prmon json
[2026-01-11 00:44:41] 2026-01-11 06:43:40,814 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 00:44:41] 2026-01-11 06:43:40,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 00:44:41] 2026-01-11 06:43:40,820 | INFO     | fitting pss+swap vs Time
[2026-01-11 00:44:41] 2026-01-11 06:43:40,821 | INFO     | sum of square deviations: 8884511292.457535
[2026-01-11 00:44:41] 2026-01-11 06:43:40,823 | INFO     | sum of deviations: 167444172598.76486
[2026-01-11 00:44:41] 2026-01-11 06:43:40,824 | INFO     | mean x: 1768104460.359477
[2026-01-11 00:44:41] 2026-01-11 06:43:40,824 | INFO     | mean y: 3389490.029411765
[2026-01-11 00:44:41] 2026-01-11 06:43:40,824 | INFO     | intersect: -33319635118.47281
[2026-01-11 00:44:41] 2026-01-11 06:43:40,824 | INFO     | chi2: 6.7198480351833485
[2026-01-11 00:44:41] 2026-01-11 06:43:40,825 | INFO     | sum of square deviations: 8456146261.2026415
[2026-01-11 00:44:41] 2026-01-11 06:43:40,827 | INFO     | sum of deviations: 283257201826.62115
[2026-01-11 00:44:41] 2026-01-11 06:43:40,827 | INFO     | mean x: 1768104307.8737543
[2026-01-11 00:44:41] 2026-01-11 06:43:40,827 | INFO     | mean y: 3430693.9900332224
[2026-01-11 00:44:41] 2026-01-11 06:43:40,828 | INFO     | intersect: -59223108596.57872
[2026-01-11 00:44:41] 2026-01-11 06:43:40,828 | INFO     | chi2: 3.759223173869087
[2026-01-11 00:44:41] 2026-01-11 06:43:40,828 | INFO     | current chi2=3.759223173869087 (change=44.05791389646331 %)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,829 | INFO     | sum of square deviations: 8041763254.094593
[2026-01-11 00:44:41] 2026-01-11 06:43:40,831 | INFO     | sum of deviations: 307603894611.0067
[2026-01-11 00:44:41] 2026-01-11 06:43:40,831 | INFO     | mean x: 1768104155.3851352
[2026-01-11 00:44:41] 2026-01-11 06:43:40,831 | INFO     | mean y: 3439549.456081081
[2026-01-11 00:44:41] 2026-01-11 06:43:40,831 | INFO     | intersect: -67627962555.977585
[2026-01-11 00:44:41] 2026-01-11 06:43:40,832 | INFO     | chi2: 3.361823589991186
[2026-01-11 00:44:41] 2026-01-11 06:43:40,832 | INFO     | current chi2=3.361823589991186 (change=10.571321932687692 %)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,832 | INFO     | right removable region: 295
[2026-01-11 00:44:41] 2026-01-11 06:43:40,832 | INFO     | sum of square deviations: 8455985831.202634
[2026-01-11 00:44:41] 2026-01-11 06:43:40,835 | INFO     | sum of deviations: 47052207460.31886
[2026-01-11 00:44:41] 2026-01-11 06:43:40,835 | INFO     | mean x: 1768104612.8737543
[2026-01-11 00:44:41] 2026-01-11 06:43:40,835 | INFO     | mean y: 3432279.8504983387
[2026-01-11 00:44:41] 2026-01-11 06:43:40,835 | INFO     | intersect: -9834950460.751928
[2026-01-11 00:44:41] 2026-01-11 06:43:40,836 | INFO     | chi2: 3.7852188840724206
[2026-01-11 00:44:41] 2026-01-11 06:43:40,836 | INFO     | current chi2=3.7852188840724206 (change=43.671064222672676 %)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,836 | INFO     | sum of square deviations: 8041515595.621659
[2026-01-11 00:44:41] 2026-01-11 06:43:40,839 | INFO     | sum of deviations: 12233040843.810757
[2026-01-11 00:44:41] 2026-01-11 06:43:40,839 | INFO     | mean x: 1768104765.3783784
[2026-01-11 00:44:41] 2026-01-11 06:43:40,839 | INFO     | mean y: 3445022.564189189
[2026-01-11 00:44:41] 2026-01-11 06:43:40,839 | INFO     | intersect: -2686259120.1208763
[2026-01-11 00:44:41] 2026-01-11 06:43:40,840 | INFO     | chi2: 3.4701969295176895
[2026-01-11 00:44:41] 2026-01-11 06:43:40,840 | INFO     | current chi2=3.4701969295176895 (change=8.322423727734522 %)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,840 | INFO     | left removable region: 20
[2026-01-11 00:44:41] 2026-01-11 06:43:40,840 | INFO     | sum of square deviations: 6448636862.349113
[2026-01-11 00:44:41] 2026-01-11 06:43:40,842 | INFO     | sum of deviations: 129656470474.84352
[2026-01-11 00:44:41] 2026-01-11 06:43:40,842 | INFO     | mean x: 1768104734.9018183
[2026-01-11 00:44:41] 2026-01-11 06:43:40,843 | INFO     | mean y: 3507308.5127272727
[2026-01-11 00:44:41] 2026-01-11 06:43:40,843 | INFO     | intersect: -35546055219.29857
[2026-01-11 00:44:41] 2026-01-11 06:43:40,843 | INFO     | chi2: 0.02132459988090621
[2026-01-11 00:44:41] 2026-01-11 06:43:40,843 | INFO     | current memory leak: 20.11 B/s (using 275 data points, chi2=0.02)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | could have reported an average CPU frequency of 2446 MHz (14 samples)
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | ..............................
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | . Timing measurements:
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | . get job = 0 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | . initial setup = 15 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | . payload setup = 7 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,844 | INFO     | . stage-in = 0 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,845 | INFO     | . payload execution = 18643 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,845 | INFO     | . stage-out = 13 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,845 | INFO     | . log creation = 0 s
[2026-01-11 00:44:41] 2026-01-11 06:43:40,845 | INFO     | ..............................
[2026-01-11 00:44:41] 2026-01-11 06:43:40,855 | INFO     | time since job start (18692s) is within the limit (349056.0s)
[2026-01-11 00:44:41] 2026-01-11 06:43:41,247 | INFO     | 
[2026-01-11 00:44:41] 2026-01-11 06:43:41,247 | INFO     | job summary report
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | --------------------------------------------------
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | PanDA job id: 6963381384
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | task id: 47962010
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | errors: (none)
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | pilot state: finished 
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | transexitcode: 0
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | exeerrorcode: 0
[2026-01-11 00:44:41] 2026-01-11 06:43:41,248 | INFO     | exeerrordiag: 
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | exitcode: 0
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | exitmsg: OK
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | cpuconsumptiontime: 215962 s
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | nevents: 900
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | neventsw: 0
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | pid: 989138
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | pgrp: 989138
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | corecount: 12
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | event service: False
[2026-01-11 00:44:41] 2026-01-11 06:43:41,249 | INFO     | sizes: {0: 2284459, 1: 2284658, 5: 2284920, 11: 2284976, 18654: 2318281, 18669: 2327291, 18671: 2327475, 18676: 2327721}
[2026-01-11 00:44:41] 2026-01-11 06:43:41,250 | INFO     | --------------------------------------------------
[2026-01-11 00:44:41] 2026-01-11 06:43:41,250 | INFO     | 
[2026-01-11 00:44:41] 2026-01-11 06:43:41,250 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/15
[2026-01-11 00:44:41] 2026-01-11 06:43:41,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,277 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:44:41] 2026-01-11 06:43:41,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,277 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:44:41] 2026-01-11 06:43:41,277 | INFO     | job 6963381384 has completed (purged errors)
[2026-01-11 00:44:41] 2026-01-11 06:43:41,277 | INFO     | overall cleanup function is called
[2026-01-11 00:44:41] 2026-01-11 06:43:42,298 | INFO     | --- collectZombieJob: --- 10, [989138]
[2026-01-11 00:44:41] 2026-01-11 06:43:42,299 | INFO     | zombie collector waiting for pid 989138
[2026-01-11 00:44:41] 2026-01-11 06:43:42,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:44:41] 2026-01-11 06:43:42,299 | INFO     | collected zombie processes
[2026-01-11 00:44:41] 2026-01-11 06:43:42,299 | INFO     | will attempt to kill all subprocesses of pid=989138
[2026-01-11 00:44:41] 2026-01-11 06:43:42,662 | INFO     | process IDs to be killed: [989138] (in reverse order)
[2026-01-11 00:44:41] 2026-01-11 06:43:42,795 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:44:41] 2026-01-11 06:43:42,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:44:41] 2026-01-11 06:43:42,805 | INFO     | did not find any defunct processes belonging to 989138
[2026-01-11 00:44:41] 2026-01-11 06:43:42,812 | INFO     | did not find any defunct processes belonging to 989138
[2026-01-11 00:44:41] 2026-01-11 06:43:42,813 | INFO     | ready for new job
[2026-01-11 00:44:41] 2026-01-11 06:43:42,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:44:41] 2026-01-11 06:43:42,816 | INFO     | ***************************************
[2026-01-11 00:44:41] 2026-01-11 06:43:42,816 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:44:41] 2026-01-11 06:43:42,816 | INFO     | ***************************************
[2026-01-11 00:44:41] 2026-01-11 06:43:42,816 | INFO     | 
[2026-01-11 00:44:41] 2026-01-11 06:43:42,820 | INFO     | architecture information:
[2026-01-11 00:44:41] 2026-01-11 06:43:42,821 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:44:41] 2026-01-11 06:43:42,837 | INFO     | cat /etc/os-release:
[2026-01-11 00:44:41] NAME="CentOS Linux"
[2026-01-11 00:44:41] VERSION="7 (Core)"
[2026-01-11 00:44:41] ID="centos"
[2026-01-11 00:44:41] ID_LIKE="rhel fedora"
[2026-01-11 00:44:41] VERSION_ID="7"
[2026-01-11 00:44:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:44:41] ANSI_COLOR="0;31"
[2026-01-11 00:44:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:44:41] HOME_URL="https://www.centos.org/"
[2026-01-11 00:44:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:44:41] 
[2026-01-11 00:44:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:44:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:44:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:44:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:44:41] 
[2026-01-11 00:44:41] 2026-01-11 06:43:42,838 | INFO     | ***************************************
[2026-01-11 00:44:41] 2026-01-11 06:43:43,340 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/15
[2026-01-11 00:44:41] 2026-01-11 06:43:43,357 | INFO     | sufficient remaining disk space (1804314083328 B)
[2026-01-11 00:44:41] 2026-01-11 06:43:43,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:44:41] 2026-01-11 06:43:43,358 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:44:41] 2026-01-11 06:43:43,358 | INFO     | update_server=False
[2026-01-11 00:44:41] 2026-01-11 06:43:43,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:44:41] 2026-01-11 06:43:43,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:44:41] 2026-01-11 06:43:43,359 | INFO     | aborting loop
[2026-01-11 00:44:41] 2026-01-11 06:43:43,808 | INFO     | all job control threads have been joined
[2026-01-11 00:44:41] 2026-01-11 06:43:44,151 | INFO     | all data control threads have been joined
[2026-01-11 00:44:41] 2026-01-11 06:43:44,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:44:41] 2026-01-11 06:43:44,363 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:44,364 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:44,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:44,439 | INFO     | [job] validate thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:44,631 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:44,761 | INFO     | all payload control threads have been joined
[2026-01-11 00:44:41] 2026-01-11 06:43:44,813 | INFO     | [job] control thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:44,853 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,079 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,109 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,156 | INFO     | [data] control thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,478 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,766 | INFO     | [payload] control thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,781 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:45,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:44:41] 2026-01-11 06:43:45,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:44:41] 2026-01-11 06:43:46,168 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:46,947 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:43:49,827 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:44:41] 2026-01-11 06:44:14,371 | INFO     | PID=982117 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 00:44:41] 2026-01-11 06:44:14,371 | INFO     | .. there are 2 such processes running
[2026-01-11 00:44:41] 2026-01-11 06:44:14,372 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:44:41] 2026-01-11 06:44:14,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:44:41] 2026-01-11 06:44:14,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:44:41] 2026-01-11 06:44:35,337 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:44:41] 2026-01-11 06:44:36,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134132504704832)>', '<ExcThread(monitor, started 134131694434048)>']
[2026-01-11 00:44:41] 2026-01-11 06:44:36,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:44:41] 2026-01-11 06:44:36,469 | INFO     | [monitor] control thread has ended
[2026-01-11 00:44:41] 2026-01-11 06:44:41,144 | INFO     | all workflow threads have been joined
[2026-01-11 00:44:41] 2026-01-11 06:44:41,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:44:41] 2026-01-11 06:44:41,144 | INFO     | traces error code: 0
[2026-01-11 00:44:41] 2026-01-11 06:44:41,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:44:41] 2026-01-11 06:44:41,233 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:44:41] 2026-01-11 06:44:41,235 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:44:41] 2026-01-11 06:44:41,238 [wrapper] pilotpid: 982117
[2026-01-11 00:44:41] 2026-01-11 06:44:41,240 [wrapper] Pilot exit status: 0
[2026-01-11 00:44:41] 2026-01-11 06:44:41,251 [wrapper] pandaids: 6963381384
[2026-01-11 00:44:41] 2026-01-11 06:44:41,300 [wrapper] cleanup supervisor_pilot 1070122 982118
[2026-01-11 00:44:41] 2026-01-11 06:44:41,303 [wrapper] Test setup, not cleaning
[2026-01-11 00:44:41] 2026-01-11 06:44:41,306 [wrapper] apfmon messages muted
[2026-01-11 00:44:41] 2026-01-11 06:44:41,309 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:44:41] 2026-01-11 06:44:41,312 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:44:41]  *** Error codes and diagnostics ***
[2026-01-11 00:44:41]     "exeErrorCode": 0,
[2026-01-11 00:44:41]     "exeErrorDiag": "",
[2026-01-11 00:44:41]     "pilotErrorCode": 0,
[2026-01-11 00:44:41]     "pilotErrorDiag": "",
[2026-01-11 00:44:41]  *** Listing of results directory ***
[2026-01-11 00:44:41] total 1166776
[2026-01-11 00:44:41] -rwx------ 1 mark mark     36322 Jan  9 01:17 runpilot2-wrapper.sh
[2026-01-11 00:44:41] -rw-r--r-- 1 mark mark    579449 Jan  9 01:20 pilot3.tar.gz
[2026-01-11 00:44:41] -rw-r--r-- 1 mark mark      5112 Jan  9 01:21 queuedata.json
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark       100 Jan 10 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:44:41] -rwxr-xr-x 1 mark mark      7986 Jan 10 19:31 run_atlas
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark       105 Jan 10 19:31 job.xml
[2026-01-11 00:44:41] -rw-r--r-- 2 mark mark 393249494 Jan 10 19:31 EVNT.47962006._000025.pool.root.1
[2026-01-11 00:44:41] -rw-r--r-- 2 mark mark     15847 Jan 10 19:31 start_atlas.sh
[2026-01-11 00:44:41] drwxrwx--x 2 mark mark      4096 Jan 10 19:31 shared
[2026-01-11 00:44:41] -rw-r--r-- 2 mark mark    592608 Jan 10 19:31 input.tar.gz
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark      9265 Jan 10 19:31 init_data.xml
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark         0 Jan 10 19:31 boinc_setup_complete
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark         0 Jan 10 19:31 boinc_lockfile
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark      2892 Jan 10 19:31 pandaJob.out
[2026-01-11 00:44:41] -rw------- 1 mark mark    989545 Jan 10 19:31 agis_schedconf.cvmfs.json
[2026-01-11 00:44:41] drwx------ 5 mark mark      4096 Jan 10 19:32 pilot3
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark       531 Jan 11 00:35 boinc_task_state.xml
[2026-01-11 00:44:41] -rw------- 1 mark mark 788218401 Jan 11 00:42 HITS.47962010._001517.pool.root.1
[2026-01-11 00:44:41] -rw------- 1 mark mark      1040 Jan 11 00:43 memory_monitor_summary.json
[2026-01-11 00:44:41] -rw------- 1 mark mark   1516240 Jan 11 00:43 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:44:41] -rw------- 1 mark mark   2032656 Jan 11 00:43 log.47962010._001517.job.log.tgz.1
[2026-01-11 00:44:41] -rw------- 1 mark mark      8587 Jan 11 00:43 heartbeat.json
[2026-01-11 00:44:41] -rw------- 1 mark mark        95 Jan 11 00:44 pilot_heartbeat.json
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark      8192 Jan 11 00:44 boinc_mmap_file
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark        28 Jan 11 00:44 wrapper_checkpoint.txt
[2026-01-11 00:44:41] -rw------- 1 mark mark      4832 Jan 11 00:44 pilotlog.txt
[2026-01-11 00:44:41] -rw------- 1 mark mark   2658534 Jan 11 00:44 log.47962010._001517.job.log.1
[2026-01-11 00:44:41] -rw------- 1 mark mark       353 Jan 11 00:44 output.list
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark       620 Jan 11 00:44 runtime_log
[2026-01-11 00:44:41] -rw------- 1 mark mark   4710400 Jan 11 00:44 result.tar.gz
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark      8904 Jan 11 00:44 runtime_log.err
[2026-01-11 00:44:41] -rw------- 1 mark mark       650 Jan 11 00:44 B1cLDmRvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRRhKDmOBzeHo.diag
[2026-01-11 00:44:41] -rw-rw-r-- 1 mark mark     21335 Jan 11 00:44 stderr.txt
[2026-01-11 00:44:41] HITS file was successfully produced:
[2026-01-11 00:44:41] -rw------- 1 mark mark 788218401 Jan 11 00:42 shared/HITS.pool.root.1
[2026-01-11 00:44:41]  *** Contents of shared directory: ***
[2026-01-11 00:44:41] total 1158988
[2026-01-11 00:44:41] -rw-r--r-- 2 mark mark 393249494 Jan 10 19:31 ATLAS.root_0
[2026-01-11 00:44:41] -rw-r--r-- 2 mark mark     15847 Jan 10 19:31 start_atlas.sh
[2026-01-11 00:44:41] -rw-r--r-- 2 mark mark    592608 Jan 10 19:31 input.tar.gz
[2026-01-11 00:44:41] -rw------- 1 mark mark 788218401 Jan 11 00:42 HITS.pool.root.1
[2026-01-11 00:44:41] -rw------- 1 mark mark   4710400 Jan 11 00:44 result.tar.gz
00:44:43 (978054): run_atlas exited; CPU time 216326.647876
00:44:43 (978054): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN