Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:26 (4143097): wrapper (7.7.26015): starting
19:46:26 (4143097): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:46:26] Arguments: --nthreads 8
[2026-01-09 19:46:26] Threads: 8
[2026-01-09 19:46:26] Checking for CVMFS
[2026-01-09 19:46:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:46:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:46:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:46:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:46:28] 2.13.3.0 11323 94148 324484 154962 1 304 29823335 32935936 18322 16776704 0 314458002 99.420 491091370 39921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:46:28] CVMFS is ok
[2026-01-09 19:46:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:46:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:46:28] Further information can be found at the LHC@home message board.
[2026-01-09 19:46:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:46:28] Checking for apptainer binary...
[2026-01-09 19:46:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:46:28] Running /usr/bin/apptainer --version
[2026-01-09 19:46:28] apptainer version 1.4.5-2.el9
[2026-01-09 19:46:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:46:29] c6-4-5-3.aglt2.org
[2026-01-09 19:46:29] apptainer works
[2026-01-09 19:46:29] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:46:29] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:46:29] Starting ATLAS job with PandaID=6963381427
[2026-01-09 19:46:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:49:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:49:25] 2026-01-11 02:48:39,465 | INFO     | time since job start (93669s) is within the limit (349056.0s)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,126 | INFO     | monitor loop #5587: job 0:6963381427 is in state 'finished'
[2026-01-10 21:49:25] 2026-01-11 02:48:40,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,401 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 21:49:25] 2026-01-11 02:48:40,404 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3085.032812500001
[2026-01-10 21:49:25] 2026-01-11 02:48:40,415 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963381427/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,415 | INFO     | extracted standard info from prmon json
[2026-01-10 21:49:25] 2026-01-11 02:48:40,415 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:49:25] 2026-01-11 02:48:40,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:49:25] 2026-01-11 02:48:40,438 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:49:25] 2026-01-11 02:48:40,440 | INFO     | sum of square deviations: 1117073660730.5837
[2026-01-10 21:49:25] 2026-01-11 02:48:40,479 | INFO     | sum of deviations: 3900594181344.309
[2026-01-10 21:49:25] 2026-01-11 02:48:40,479 | INFO     | mean x: 1768052923.8336594
[2026-01-10 21:49:25] 2026-01-11 02:48:40,479 | INFO     | mean y: 2911029.056099152
[2026-01-10 21:49:25] 2026-01-11 02:48:40,479 | INFO     | intersect: -6170770429.428898
[2026-01-10 21:49:25] 2026-01-11 02:48:40,481 | INFO     | chi2: 5.748477729948076
[2026-01-10 21:49:25] 2026-01-11 02:48:40,483 | INFO     | sum of square deviations: 1106180683823.3784
[2026-01-10 21:49:25] 2026-01-11 02:48:40,521 | INFO     | sum of deviations: 4292143992821.143
[2026-01-10 21:49:25] 2026-01-11 02:48:40,521 | INFO     | mean x: 1768052771.3494763
[2026-01-10 21:49:25] 2026-01-11 02:48:40,522 | INFO     | mean y: 2916507.304973822
[2026-01-10 21:49:25] 2026-01-11 02:48:40,522 | INFO     | intersect: -6857388678.3803215
[2026-01-10 21:49:25] 2026-01-11 02:48:40,523 | INFO     | chi2: 3.7260245182075464
[2026-01-10 21:49:25] 2026-01-11 02:48:40,523 | INFO     | current chi2=3.7260245182075464 (change=35.182413618897286 %)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,525 | INFO     | sum of square deviations: 1095358405826.3193
[2026-01-10 21:49:25] 2026-01-11 02:48:40,563 | INFO     | sum of deviations: 4318722478028.2065
[2026-01-10 21:49:25] 2026-01-11 02:48:40,563 | INFO     | mean x: 1768052618.8627708
[2026-01-10 21:49:25] 2026-01-11 02:48:40,563 | INFO     | mean y: 2916880.4602757716
[2026-01-10 21:49:25] 2026-01-11 02:48:40,564 | INFO     | intersect: -6968069553.572724
[2026-01-10 21:49:25] 2026-01-11 02:48:40,565 | INFO     | chi2: 3.6531645686009986
[2026-01-10 21:49:25] 2026-01-11 02:48:40,565 | INFO     | current chi2=3.6531645686009986 (change=1.9554339819963957 %)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,565 | INFO     | right removable region: 1522
[2026-01-10 21:49:25] 2026-01-11 02:48:40,567 | INFO     | sum of square deviations: 1106176163723.3794
[2026-01-10 21:49:25] 2026-01-11 02:48:40,606 | INFO     | sum of deviations: 3382243390572.762
[2026-01-10 21:49:25] 2026-01-11 02:48:40,606 | INFO     | mean x: 1768053076.3494763
[2026-01-10 21:49:25] 2026-01-11 02:48:40,606 | INFO     | mean y: 2918280.820680628
[2026-01-10 21:49:25] 2026-01-11 02:48:40,606 | INFO     | intersect: -5403079450.622271
[2026-01-10 21:49:25] 2026-01-11 02:48:40,608 | INFO     | chi2: 2.792620595047982
[2026-01-10 21:49:25] 2026-01-11 02:48:40,608 | INFO     | current chi2=2.792620595047982 (change=51.41982406056557 %)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,610 | INFO     | sum of square deviations: 1095350390076.4894
[2026-01-10 21:49:25] 2026-01-11 02:48:40,669 | INFO     | sum of deviations: 3232187801103.4956
[2026-01-10 21:49:25] 2026-01-11 02:48:40,670 | INFO     | mean x: 1768053228.860801
[2026-01-10 21:49:25] 2026-01-11 02:48:40,670 | INFO     | mean y: 2920392.9881812213
[2026-01-10 21:49:25] 2026-01-11 02:48:40,670 | INFO     | intersect: -5214296061.032953
[2026-01-10 21:49:25] 2026-01-11 02:48:40,671 | INFO     | chi2: 2.5365084456993388
[2026-01-10 21:49:25] 2026-01-11 02:48:40,672 | INFO     | current chi2=2.5365084456993388 (change=9.171032749768957 %)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,672 | INFO     | left removable region: 20
[2026-01-10 21:49:25] 2026-01-11 02:48:40,673 | INFO     | sum of square deviations: 1050661671831.7202
[2026-01-10 21:49:25] 2026-01-11 02:48:40,710 | INFO     | sum of deviations: 3484160013408.0127
[2026-01-10 21:49:25] 2026-01-11 02:48:40,710 | INFO     | mean x: 1768053198.4114513
[2026-01-10 21:49:25] 2026-01-11 02:48:40,711 | INFO     | mean y: 2928611.522636485
[2026-01-10 21:49:25] 2026-01-11 02:48:40,711 | INFO     | intersect: -5860214987.066701
[2026-01-10 21:49:25] 2026-01-11 02:48:40,712 | INFO     | chi2: 0.37901741534865496
[2026-01-10 21:49:25] 2026-01-11 02:48:40,713 | INFO     | current memory leak: 3.32 B/s (using 1502 data points, chi2=0.38)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,714 | INFO     | could have reported an average CPU frequency of 3039 MHz (54 samples)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,714 | INFO     | ..............................
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . Timing measurements:
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . get job = 0 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . initial setup = 4 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . payload setup = 45 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . stage-in = 0 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . payload execution = 93541 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . stage-out = 3 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | . log creation = 0 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,715 | INFO     | ..............................
[2026-01-10 21:49:25] 2026-01-11 02:48:40,817 | INFO     | 
[2026-01-10 21:49:25] 2026-01-11 02:48:40,817 | INFO     | job summary report
[2026-01-10 21:49:25] 2026-01-11 02:48:40,817 | INFO     | --------------------------------------------------
[2026-01-10 21:49:25] 2026-01-11 02:48:40,817 | INFO     | PanDA job id: 6963381427
[2026-01-10 21:49:25] 2026-01-11 02:48:40,817 | INFO     | task id: 47962010
[2026-01-10 21:49:25] 2026-01-11 02:48:40,817 | INFO     | errors: (none)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | pilot state: finished 
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | transexitcode: 0
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | exeerrorcode: 0
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | exeerrordiag: 
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | exitcode: 0
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | exitmsg: OK
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | cpuconsumptiontime: 260545 s
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | nevents: 900
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | neventsw: 0
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | pid: 4159386
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | pgrp: 4159386
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | corecount: 8
[2026-01-10 21:49:25] 2026-01-11 02:48:40,818 | INFO     | event service: False
[2026-01-10 21:49:25] 2026-01-11 02:48:40,819 | INFO     | sizes: {0: 2284451, 1: 2284650, 2: 2284650, 13: 2284678, 24: 2284734, 34: 2285024, 35: 2285180, 93591: 2353472, 93595: 2362466, 93598: 2362522, 93603: 2362768}
[2026-01-10 21:49:25] 2026-01-11 02:48:40,819 | INFO     | --------------------------------------------------
[2026-01-10 21:49:25] 2026-01-11 02:48:40,819 | INFO     | 
[2026-01-10 21:49:25] 2026-01-11 02:48:40,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:49:25] 2026-01-11 02:48:40,841 | INFO     | job 6963381427 has completed (purged errors)
[2026-01-10 21:49:25] 2026-01-11 02:48:40,842 | INFO     | overall cleanup function is called
[2026-01-10 21:49:25] 2026-01-11 02:48:41,856 | INFO     | --- collectZombieJob: --- 10, [4159386]
[2026-01-10 21:49:25] 2026-01-11 02:48:41,856 | INFO     | zombie collector waiting for pid 4159386
[2026-01-10 21:49:25] 2026-01-11 02:48:41,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:49:25] 2026-01-11 02:48:41,856 | INFO     | collected zombie processes
[2026-01-10 21:49:25] 2026-01-11 02:48:41,857 | INFO     | will attempt to kill all subprocesses of pid=4159386
[2026-01-10 21:49:25] 2026-01-11 02:48:42,050 | INFO     | process IDs to be killed: [4159386] (in reverse order)
[2026-01-10 21:49:25] 2026-01-11 02:48:42,144 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:49:25] 2026-01-11 02:48:42,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:49:25] 2026-01-11 02:48:42,160 | INFO     | did not find any defunct processes belonging to 4159386
[2026-01-10 21:49:25] 2026-01-11 02:48:42,174 | INFO     | did not find any defunct processes belonging to 4159386
[2026-01-10 21:49:25] 2026-01-11 02:48:42,175 | INFO     | ready for new job
[2026-01-10 21:49:25] 2026-01-11 02:48:42,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:49:25] 2026-01-11 02:48:42,181 | INFO     | ***************************************
[2026-01-10 21:49:25] 2026-01-11 02:48:42,181 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:49:25] 2026-01-11 02:48:42,181 | INFO     | ***************************************
[2026-01-10 21:49:25] 2026-01-11 02:48:42,181 | INFO     | 
[2026-01-10 21:49:25] 2026-01-11 02:48:42,184 | INFO     | architecture information:
[2026-01-10 21:49:25] 2026-01-11 02:48:42,185 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:49:25] 2026-01-11 02:48:42,199 | INFO     | cat /etc/os-release:
[2026-01-10 21:49:25] NAME="CentOS Linux"
[2026-01-10 21:49:25] VERSION="7 (Core)"
[2026-01-10 21:49:25] ID="centos"
[2026-01-10 21:49:25] ID_LIKE="rhel fedora"
[2026-01-10 21:49:25] VERSION_ID="7"
[2026-01-10 21:49:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:49:25] ANSI_COLOR="0;31"
[2026-01-10 21:49:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:49:25] HOME_URL="https://www.centos.org/"
[2026-01-10 21:49:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:49:25] 
[2026-01-10 21:49:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:49:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:49:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:49:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:49:25] 
[2026-01-10 21:49:25] 2026-01-11 02:48:42,200 | INFO     | ***************************************
[2026-01-10 21:49:25] 2026-01-11 02:48:42,702 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:49:25] 2026-01-11 02:48:42,720 | INFO     | sufficient remaining disk space (74913415168 B)
[2026-01-10 21:49:25] 2026-01-11 02:48:42,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:49:25] 2026-01-11 02:48:42,721 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:49:25] 2026-01-11 02:48:42,721 | INFO     | update_server=False
[2026-01-10 21:49:25] 2026-01-11 02:48:42,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:49:25] 2026-01-11 02:48:42,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:49:25] 2026-01-11 02:48:42,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:49:25] 2026-01-11 02:48:42,827 | INFO     | all data control threads have been joined
[2026-01-10 21:49:25] 2026-01-11 02:48:42,833 | INFO     | all payload control threads have been joined
[2026-01-10 21:49:25] 2026-01-11 02:48:43,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:49:25] 2026-01-11 02:48:43,634 | INFO     | aborting loop
[2026-01-10 21:49:25] 2026-01-11 02:48:43,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:49:25] 2026-01-11 02:48:43,726 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:43,727 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:43,727 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:43,779 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:43,832 | INFO     | [data] control thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:43,838 | INFO     | [payload] control thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:43,959 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:44,280 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:44,284 | INFO     | all job control threads have been joined
[2026-01-10 21:49:25] 2026-01-11 02:48:44,286 | INFO     | [job] validate thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:44,378 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:44,639 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:44,863 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:45,289 | INFO     | [job] control thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:45,670 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:46,729 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:48:53,610 | INFO     | job.realtimelogging is not enabled
[2026-01-10 21:49:25] 2026-01-11 02:48:54,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:49:25] 2026-01-11 02:49:13,001 | INFO     | PID=4149764 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:49:25] 2026-01-11 02:49:13,001 | INFO     | .. there are 23 such processes running
[2026-01-10 21:49:25] 2026-01-11 02:49:13,002 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:49:25] 2026-01-11 02:49:13,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:49:25] 2026-01-11 02:49:13,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:49:25] 2026-01-11 02:49:19,612 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:49:25] 2026-01-11 02:49:19,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523098732352)>', '<ExcThread(monitor, started 140522471552768)>']
[2026-01-10 21:49:25] 2026-01-11 02:49:20,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:49:25] 2026-01-11 02:49:20,039 | INFO     | [monitor] control thread has ended
[2026-01-10 21:49:25] 2026-01-11 02:49:24,756 | INFO     | all workflow threads have been joined
[2026-01-10 21:49:25] 2026-01-11 02:49:24,756 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:49:25] 2026-01-11 02:49:24,756 | INFO     | traces error code: 0
[2026-01-10 21:49:25] 2026-01-11 02:49:24,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:49:25] 2026-01-11 02:49:24,930 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:49:25] 2026-01-11 02:49:24,932 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:49:25] 2026-01-11 02:49:24,934 [wrapper] pilotpid: 4149764
[2026-01-10 21:49:25] 2026-01-11 02:49:24,936 [wrapper] Pilot exit status: 0
[2026-01-10 21:49:25] 2026-01-11 02:49:24,950 [wrapper] pandaids: 6963381427
[2026-01-10 21:49:25] 2026-01-11 02:49:25,024 [wrapper] cleanup supervisor_pilot 1334816 4149765
[2026-01-10 21:49:25] 2026-01-11 02:49:25,027 [wrapper] Test setup, not cleaning
[2026-01-10 21:49:25] 2026-01-11 02:49:25,029 [wrapper] apfmon messages muted
[2026-01-10 21:49:25] 2026-01-11 02:49:25,032 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:49:25] 2026-01-11 02:49:25,035 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:49:25]  *** Error codes and diagnostics ***
[2026-01-10 21:49:25]     "exeErrorCode": 0,
[2026-01-10 21:49:25]     "exeErrorDiag": "",
[2026-01-10 21:49:25]     "pilotErrorCode": 0,
[2026-01-10 21:49:25]     "pilotErrorDiag": "",
[2026-01-10 21:49:25]  *** Listing of results directory ***
[2026-01-10 21:49:25] total 1196168
[2026-01-10 21:49:25] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:49:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:46 run_atlas
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:46 job.xml
[2026-01-10 21:49:25] -rw-r--r--. 2 boincer umatlas 393239145 Jan  9 19:46 EVNT.47962006._000029.pool.root.1
[2026-01-10 21:49:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:46 start_atlas.sh
[2026-01-10 21:49:25] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:46 shared
[2026-01-10 21:49:25] -rw-r--r--. 2 boincer umatlas    592610 Jan  9 19:46 input.tar.gz
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:46 boinc_lockfile
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 19:46 pandaJob.out
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas        57 Jan  9 19:46 setup.sh.local
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas    989374 Jan  9 19:47 agis_schedconf.cvmfs.json
[2026-01-10 21:49:25] drwx------. 5 boincer umatlas      4096 Jan  9 19:47 pilot3
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas       533 Jan 10 21:39 boinc_task_state.xml
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas 799312366 Jan 10 21:47 HITS.47962010._001560.pool.root.1
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas      1055 Jan 10 21:48 memory_monitor_summary.json
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas   1516240 Jan 10 21:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas   2472585 Jan 10 21:48 log.47962010._001560.job.log.tgz.1
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas        95 Jan 10 21:48 pilot_heartbeat.json
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas      8621 Jan 10 21:48 heartbeat.json
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas      6876 Jan 10 21:49 init_data.xml
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:49 boinc_mmap_file
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas        29 Jan 10 21:49 wrapper_checkpoint.txt
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas      4896 Jan 10 21:49 pilotlog.txt
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas  11728547 Jan 10 21:49 log.47962010._001560.job.log.1
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas       353 Jan 10 21:49 output.list
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:49 runtime_log
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas  14223360 Jan 10 21:49 result.tar.gz
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas       660 Jan 10 21:49 psVKDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFcmKDmblmbtm.diag
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 21:49 runtime_log.err
[2026-01-10 21:49:25] -rw-r--r--. 1 boincer umatlas     21259 Jan 10 21:49 stderr.txt
[2026-01-10 21:49:25] HITS file was successfully produced:
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas 799312366 Jan 10 21:47 shared/HITS.pool.root.1
[2026-01-10 21:49:25]  *** Contents of shared directory: ***
[2026-01-10 21:49:25] total 1179096
[2026-01-10 21:49:25] -rw-r--r--. 2 boincer umatlas 393239145 Jan  9 19:46 ATLAS.root_0
[2026-01-10 21:49:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:46 start_atlas.sh
[2026-01-10 21:49:25] -rw-r--r--. 2 boincer umatlas    592610 Jan  9 19:46 input.tar.gz
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas 799312366 Jan 10 21:47 HITS.pool.root.1
[2026-01-10 21:49:25] -rw-------. 1 boincer umatlas  14223360 Jan 10 21:49 result.tar.gz
21:49:26 (4143097): run_atlas exited; CPU time 262171.303769
21:49:26 (4143097): called boinc_finish(0)

</stderr_txt>
]]>

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