Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:20:38 (120125): wrapper (7.7.26015): starting
21:20:38 (120125): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:20:38] Arguments: --nthreads 8
[2026-01-09 21:20:38] Threads: 8
[2026-01-09 21:20:38] Checking for CVMFS
[2026-01-09 21:20:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:20:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:20:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:20:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:20:39] 2.13.3.0 7405 23709 212548 154964 3 126 28388070 40960001 24194 16776704 0 93335236 99.722 71170036 35205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 21:20:39] CVMFS is ok
[2026-01-09 21:20:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:20:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:20:39] Further information can be found at the LHC@home message board.
[2026-01-09 21:20:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:20:39] Checking for apptainer binary...
[2026-01-09 21:20:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:20:39] Running /usr/bin/apptainer --version
[2026-01-09 21:20:39] apptainer version 1.4.5-2.el9
[2026-01-09 21:20:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:20:39] c-212-3.aglt2.org
[2026-01-09 21:20:39] apptainer works
[2026-01-09 21:20:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:20:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:20:39] Starting ATLAS job with PandaID=6963383814
[2026-01-09 21:20:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:05:54]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:05:54] 2026-01-10 19:04:53,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 14:05:54] 2026-01-10 19:04:54,633 | INFO     | time since job start (60229s) is within the limit (349056.0s)
[2026-01-10 14:05:54] 2026-01-10 19:04:54,963 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 14:05:54] 2026-01-10 19:04:54,968 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3234.678541666665
[2026-01-10 14:05:54] 2026-01-10 19:04:54,981 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963383814/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:05:54] 2026-01-10 19:04:54,982 | INFO     | extracted standard info from prmon json
[2026-01-10 14:05:54] 2026-01-10 19:04:54,982 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:05:54] 2026-01-10 19:04:54,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:05:54] 2026-01-10 19:04:55,002 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:05:54] 2026-01-10 19:04:55,003 | INFO     | sum of square deviations: 298145611317.2297
[2026-01-10 14:05:54] 2026-01-10 19:04:55,020 | INFO     | sum of deviations: 2916015751142.18
[2026-01-10 14:05:54] 2026-01-10 19:04:55,020 | INFO     | mean x: 1768041779.72847
[2026-01-10 14:05:54] 2026-01-10 19:04:55,020 | INFO     | mean y: 2871523.6200607903
[2026-01-10 14:05:54] 2026-01-10 19:04:55,020 | INFO     | intersect: -17289476519.296547
[2026-01-10 14:05:54] 2026-01-10 19:04:55,021 | INFO     | chi2: 5.591457467707532
[2026-01-10 14:05:54] 2026-01-10 19:04:55,022 | INFO     | sum of square deviations: 293637944779.7164
[2026-01-10 14:05:54] 2026-01-10 19:04:55,042 | INFO     | sum of deviations: 3129563541177.6143
[2026-01-10 14:05:54] 2026-01-10 19:04:55,042 | INFO     | mean x: 1768041627.2372708
[2026-01-10 14:05:54] 2026-01-10 19:04:55,042 | INFO     | mean y: 2878739.16904277
[2026-01-10 14:05:54] 2026-01-10 19:04:55,042 | INFO     | intersect: -18840730250.25173
[2026-01-10 14:05:54] 2026-01-10 19:04:55,043 | INFO     | chi2: 3.8918879952843013
[2026-01-10 14:05:54] 2026-01-10 19:04:55,043 | INFO     | current chi2=3.8918879952843013 (change=30.395822238455576 %)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,044 | INFO     | sum of square deviations: 289175893617.53955
[2026-01-10 14:05:54] 2026-01-10 19:04:55,066 | INFO     | sum of deviations: 3105672553686.987
[2026-01-10 14:05:54] 2026-01-10 19:04:55,067 | INFO     | mean x: 1768041474.7451382
[2026-01-10 14:05:54] 2026-01-10 19:04:55,067 | INFO     | mean y: 2877920.365404299
[2026-01-10 14:05:54] 2026-01-10 19:04:55,067 | INFO     | intersect: -18985419524.50568
[2026-01-10 14:05:54] 2026-01-10 19:04:55,068 | INFO     | chi2: 3.858802676435658
[2026-01-10 14:05:54] 2026-01-10 19:04:55,068 | INFO     | current chi2=3.858802676435658 (change=0.8501097382229887 %)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,068 | INFO     | right removable region: 976
[2026-01-10 14:05:54] 2026-01-10 19:04:55,069 | INFO     | sum of square deviations: 293636904119.7162
[2026-01-10 14:05:54] 2026-01-10 19:04:55,087 | INFO     | sum of deviations: 2553159480384.5835
[2026-01-10 14:05:54] 2026-01-10 19:04:55,087 | INFO     | mean x: 1768041932.2372708
[2026-01-10 14:05:54] 2026-01-10 19:04:55,087 | INFO     | mean y: 2883794.1863543787
[2026-01-10 14:05:54] 2026-01-10 19:04:55,087 | INFO     | intersect: -15370160117.108473
[2026-01-10 14:05:54] 2026-01-10 19:04:55,088 | INFO     | chi2: 2.123441833882001
[2026-01-10 14:05:54] 2026-01-10 19:04:55,088 | INFO     | current chi2=2.123441833882001 (change=62.02346443399487 %)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,089 | INFO     | sum of square deviations: 289173931857.5396
[2026-01-10 14:05:54] 2026-01-10 19:04:55,105 | INFO     | sum of deviations: 2452409725958.041
[2026-01-10 14:05:54] 2026-01-10 19:04:55,106 | INFO     | mean x: 1768042084.7451382
[2026-01-10 14:05:54] 2026-01-10 19:04:55,106 | INFO     | mean y: 2887232.060388946
[2026-01-10 14:05:54] 2026-01-10 19:04:55,106 | INFO     | intersect: -14991422859.031096
[2026-01-10 14:05:54] 2026-01-10 19:04:55,107 | INFO     | chi2: 1.859105598650345
[2026-01-10 14:05:54] 2026-01-10 19:04:55,107 | INFO     | current chi2=1.859105598650345 (change=12.448480152074886 %)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,107 | INFO     | left removable region: 20
[2026-01-10 14:05:54] 2026-01-10 19:04:55,108 | INFO     | sum of square deviations: 270925895572.5149
[2026-01-10 14:05:54] 2026-01-10 19:04:55,124 | INFO     | sum of deviations: 2540096724139.388
[2026-01-10 14:05:54] 2026-01-10 19:04:55,124 | INFO     | mean x: 1768042054.2656903
[2026-01-10 14:05:54] 2026-01-10 19:04:55,124 | INFO     | mean y: 2897043.0575313806
[2026-01-10 14:05:54] 2026-01-10 19:04:55,125 | INFO     | intersect: -16573583476.424273
[2026-01-10 14:05:54] 2026-01-10 19:04:55,125 | INFO     | chi2: 0.09696014020479256
[2026-01-10 14:05:54] 2026-01-10 19:04:55,125 | INFO     | current memory leak: 9.38 B/s (using 956 data points, chi2=0.10)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,126 | INFO     | could have reported an average CPU frequency of 3214 MHz (37 samples)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | ..............................
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . Timing measurements:
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . get job = 0 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . initial setup = 3 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . payload setup = 12 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . stage-in = 0 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . payload execution = 60184 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . stage-out = 2 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | . log creation = 0 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,127 | INFO     | ..............................
[2026-01-10 14:05:54] 2026-01-10 19:04:55,562 | INFO     | 
[2026-01-10 14:05:54] 2026-01-10 19:04:55,562 | INFO     | job summary report
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | --------------------------------------------------
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | PanDA job id: 6963383814
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | task id: 47962010
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | errors: (none)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | pilot state: finished 
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | transexitcode: 0
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | exeerrorcode: 0
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | exeerrordiag: 
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | exitcode: 0
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | exitmsg: OK
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | cpuconsumptiontime: 201721 s
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | nevents: 900
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | neventsw: 0
[2026-01-10 14:05:54] 2026-01-10 19:04:55,563 | INFO     | pid: 138746
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | pgrp: 138746
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | corecount: 8
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | event service: False
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | sizes: {0: 2284397, 1: 2284652, 10: 2284914, 12: 2284942, 60201: 2336264, 60205: 2345442, 60211: 2345632}
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | --------------------------------------------------
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | 
[2026-01-10 14:05:54] 2026-01-10 19:04:55,564 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | job 6963383814 has completed (purged errors)
[2026-01-10 14:05:54] 2026-01-10 19:04:55,585 | INFO     | overall cleanup function is called
[2026-01-10 14:05:54] 2026-01-10 19:04:56,600 | INFO     | --- collectZombieJob: --- 10, [138746]
[2026-01-10 14:05:54] 2026-01-10 19:04:56,600 | INFO     | zombie collector waiting for pid 138746
[2026-01-10 14:05:54] 2026-01-10 19:04:56,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:05:54] 2026-01-10 19:04:56,601 | INFO     | collected zombie processes
[2026-01-10 14:05:54] 2026-01-10 19:04:56,601 | INFO     | will attempt to kill all subprocesses of pid=138746
[2026-01-10 14:05:54] 2026-01-10 19:04:57,005 | INFO     | process IDs to be killed: [138746] (in reverse order)
[2026-01-10 14:05:54] 2026-01-10 19:04:57,158 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:05:54] 2026-01-10 19:04:57,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:05:54] 2026-01-10 19:04:57,194 | INFO     | did not find any defunct processes belonging to 138746
[2026-01-10 14:05:54] 2026-01-10 19:04:57,210 | INFO     | did not find any defunct processes belonging to 138746
[2026-01-10 14:05:54] 2026-01-10 19:04:57,210 | INFO     | ready for new job
[2026-01-10 14:05:54] 2026-01-10 19:04:57,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:05:54] 2026-01-10 19:04:57,215 | INFO     | ***************************************
[2026-01-10 14:05:54] 2026-01-10 19:04:57,215 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:05:54] 2026-01-10 19:04:57,215 | INFO     | ***************************************
[2026-01-10 14:05:54] 2026-01-10 19:04:57,215 | INFO     | 
[2026-01-10 14:05:54] 2026-01-10 19:04:57,220 | INFO     | architecture information:
[2026-01-10 14:05:54] 2026-01-10 19:04:57,221 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:05:54] 2026-01-10 19:04:57,236 | INFO     | cat /etc/os-release:
[2026-01-10 14:05:54] NAME="CentOS Linux"
[2026-01-10 14:05:54] VERSION="7 (Core)"
[2026-01-10 14:05:54] ID="centos"
[2026-01-10 14:05:54] ID_LIKE="rhel fedora"
[2026-01-10 14:05:54] VERSION_ID="7"
[2026-01-10 14:05:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:05:54] ANSI_COLOR="0;31"
[2026-01-10 14:05:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:05:54] HOME_URL="https://www.centos.org/"
[2026-01-10 14:05:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:05:54] 
[2026-01-10 14:05:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:05:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:05:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:05:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:05:54] 
[2026-01-10 14:05:54] 2026-01-10 19:04:57,236 | INFO     | ***************************************
[2026-01-10 14:05:54] 2026-01-10 19:04:57,743 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-10 14:05:54] 2026-01-10 19:04:57,762 | INFO     | sufficient remaining disk space (128877330432 B)
[2026-01-10 14:05:54] 2026-01-10 19:04:57,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:05:54] 2026-01-10 19:04:57,762 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:05:54] 2026-01-10 19:04:57,762 | INFO     | update_server=False
[2026-01-10 14:05:54] 2026-01-10 19:04:57,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:05:54] 2026-01-10 19:04:57,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:05:54] 2026-01-10 19:04:57,938 | INFO     | all payload control threads have been joined
[2026-01-10 14:05:54] 2026-01-10 19:04:58,206 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 14:05:54] 2026-01-10 19:04:58,207 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 14:05:54] 2026-01-10 19:04:58,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:05:54] 2026-01-10 19:04:58,207 | INFO     | will abort loop
[2026-01-10 14:05:54] 2026-01-10 19:04:58,533 | INFO     | all data control threads have been joined
[2026-01-10 14:05:54] 2026-01-10 19:04:58,770 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:58,797 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:58,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:58,943 | INFO     | [payload] control thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,047 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,117 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,154 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,211 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,289 | INFO     | all job control threads have been joined
[2026-01-10 14:05:54] 2026-01-10 19:04:59,423 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,539 | INFO     | [data] control thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:05:54] 2026-01-10 19:04:59,769 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:04:59,976 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:05:00,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:05:54] 2026-01-10 19:05:00,210 | INFO     | [job] validate thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:05:00,294 | INFO     | [job] control thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:05:01,205 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:05:03,556 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:05:54] 2026-01-10 19:05:28,284 | INFO     | PID=128213 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 14:05:54] 2026-01-10 19:05:28,284 | INFO     | .. there are 20 such processes running
[2026-01-10 14:05:54] 2026-01-10 19:05:28,286 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:05:54] 2026-01-10 19:05:28,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:05:54] 2026-01-10 19:05:28,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:05:54] 2026-01-10 19:05:47,853 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:05:54] 2026-01-10 19:05:49,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282541360960)>', '<ExcThread(monitor, started 140282020493056)>']
[2026-01-10 14:05:54] 2026-01-10 19:05:49,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:05:54] 2026-01-10 19:05:49,392 | INFO     | [monitor] control thread has ended
[2026-01-10 14:05:54] 2026-01-10 19:05:54,181 | INFO     | all workflow threads have been joined
[2026-01-10 14:05:54] 2026-01-10 19:05:54,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:05:54] 2026-01-10 19:05:54,182 | INFO     | traces error code: 0
[2026-01-10 14:05:54] 2026-01-10 19:05:54,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:05:54] 2026-01-10 19:05:54,360 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:05:54] 2026-01-10 19:05:54,363 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:05:54] 2026-01-10 19:05:54,365 [wrapper] pilotpid: 128213
[2026-01-10 14:05:54] 2026-01-10 19:05:54,368 [wrapper] Pilot exit status: 0
[2026-01-10 14:05:54] 2026-01-10 19:05:54,405 [wrapper] pandaids: 6963383814
[2026-01-10 14:05:54] 2026-01-10 19:05:54,501 [wrapper] cleanup supervisor_pilot 3860220 128214
[2026-01-10 14:05:54] 2026-01-10 19:05:54,508 [wrapper] Test setup, not cleaning
[2026-01-10 14:05:54] 2026-01-10 19:05:54,515 [wrapper] apfmon messages muted
[2026-01-10 14:05:54] 2026-01-10 19:05:54,519 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:05:54] 2026-01-10 19:05:54,521 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:05:54]  *** Error codes and diagnostics ***
[2026-01-10 14:05:54]     "exeErrorCode": 0,
[2026-01-10 14:05:54]     "exeErrorDiag": "",
[2026-01-10 14:05:54]     "pilotErrorCode": 0,
[2026-01-10 14:05:54]     "pilotErrorDiag": "",
[2026-01-10 14:05:54]  *** Listing of results directory ***
[2026-01-10 14:05:54] total 1168696
[2026-01-10 14:05:54] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:05:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:20 run_atlas
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:20 job.xml
[2026-01-10 14:05:54] -rw-r--r--. 2 boincer umatlas 391755878 Jan  9 21:20 EVNT.47962006._000126.pool.root.1
[2026-01-10 14:05:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:20 start_atlas.sh
[2026-01-10 14:05:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:20 shared
[2026-01-10 14:05:54] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 21:20 input.tar.gz
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:20 boinc_lockfile
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas      2893 Jan  9 21:20 pandaJob.out
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas        57 Jan  9 21:20 setup.sh.local
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas    989382 Jan  9 21:21 agis_schedconf.cvmfs.json
[2026-01-10 14:05:54] drwx------. 5 boincer umatlas      4096 Jan  9 21:21 pilot3
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas       533 Jan 10 13:58 boinc_task_state.xml
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas      6959 Jan 10 14:02 init_data.xml
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas 780877450 Jan 10 14:04 HITS.47962010._001802.pool.root.1
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas      1057 Jan 10 14:04 memory_monitor_summary.json
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas   1516240 Jan 10 14:04 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas   2128074 Jan 10 14:04 log.47962010._001802.job.log.tgz.1
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas      7929 Jan 10 14:04 heartbeat.json
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas        95 Jan 10 14:05 pilot_heartbeat.json
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 14:05 boinc_mmap_file
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas        29 Jan 10 14:05 wrapper_checkpoint.txt
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas      5010 Jan 10 14:05 pilotlog.txt
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas   7970362 Jan 10 14:05 log.47962010._001802.job.log.1
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas       353 Jan 10 14:05 output.list
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas       620 Jan 10 14:05 runtime_log
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas  10117120 Jan 10 14:05 result.tar.gz
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 14:05 runtime_log.err
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas       662 Jan 10 14:05 QacKDmcvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiRhKDmeZbzPn.diag
[2026-01-10 14:05:54] -rw-r--r--. 1 boincer umatlas     21197 Jan 10 14:05 stderr.txt
[2026-01-10 14:05:54] HITS file was successfully produced:
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas 780877450 Jan 10 14:04 shared/HITS.pool.root.1
[2026-01-10 14:05:54]  *** Contents of shared directory: ***
[2026-01-10 14:05:54] total 1155636
[2026-01-10 14:05:54] -rw-r--r--. 2 boincer umatlas 391755878 Jan  9 21:20 ATLAS.root_0
[2026-01-10 14:05:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:20 start_atlas.sh
[2026-01-10 14:05:54] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 21:20 input.tar.gz
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas 780877450 Jan 10 14:04 HITS.pool.root.1
[2026-01-10 14:05:54] -rw-------. 1 boincer umatlas  10117120 Jan 10 14:05 result.tar.gz
14:05:55 (120125): run_atlas exited; CPU time 201699.414115
14:05:55 (120125): called boinc_finish(0)

</stderr_txt>
]]>

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