Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:46:26 (14972): wrapper (7.7.26015): starting
02:46:26 (14972): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 02:46:26] Arguments: --nthreads 8
[2026-01-10 02:46:26] Threads: 8
[2026-01-10 02:46:26] Checking for CVMFS
[2026-01-10 02:46:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 02:46:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 02:46:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 02:46:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 02:46:26] 2.11.0.0 4201 52846 67116 154963 1 60 2876158 4096001 93 130560 1 2599923 99.259 3205148 505 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 02:46:26] CVMFS is ok
[2026-01-10 02:46:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 02:46:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 02:46:26] Further information can be found at the LHC@home message board.
[2026-01-10 02:46:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:46:26] Checking for apptainer binary...
[2026-01-10 02:46:26] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 02:46:26] apptainer is not installed, using version from CVMFS
[2026-01-10 02:46:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:46:26] WARNING: Environment variable TMPDIR already has value [/tmp/job_11010017/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment fat-node003
[2026-01-10 02:46:26] apptainer works
[2026-01-10 02:46:26] Set ATHENA_PROC_NUMBER=8
[2026-01-10 02:46:26] Set ATHENA_CORE_NUMBER=8
[2026-01-10 02:46:26] Starting ATLAS job with PandaID=6963381536
[2026-01-10 02:46:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11010017/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:34:20]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:34:20] 2026-01-10 06:33:47,374 | INFO     | executing command: lscpu
[2026-01-10 07:34:20] 2026-01-10 06:33:47,404 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 07:34:20] 2026-01-10 06:33:47,514 | INFO     | time since job start (17236s) is within the limit (349056.0s)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,223 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 07:34:20] 2026-01-10 06:33:49,239 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2396.586484375
[2026-01-10 07:34:20] 2026-01-10 06:33:49,256 | INFO     | using path: /tmp/job_11010017/atlas/pilot/slots/0/PanDA_Pilot-6963381536/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,256 | INFO     | extracted standard info from prmon json
[2026-01-10 07:34:20] 2026-01-10 06:33:49,256 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:34:20] 2026-01-10 06:33:49,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:34:20] 2026-01-10 06:33:49,259 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:34:20] 2026-01-10 06:33:49,259 | INFO     | sum of square deviations: 6953769450.5
[2026-01-10 07:34:20] 2026-01-10 06:33:49,260 | INFO     | sum of deviations: 1071710356914.4999
[2026-01-10 07:34:20] 2026-01-10 06:33:49,261 | INFO     | mean x: 1768018204.5
[2026-01-10 07:34:20] 2026-01-10 06:33:49,261 | INFO     | mean y: 3545339.358156028
[2026-01-10 07:34:20] 2026-01-10 06:33:49,261 | INFO     | intersect: -272482253113.4199
[2026-01-10 07:34:20] 2026-01-10 06:33:49,261 | INFO     | chi2: 6.003752577910644
[2026-01-10 07:34:20] 2026-01-10 06:33:49,261 | INFO     | sum of square deviations: 6590404498.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,262 | INFO     | sum of deviations: 1121646640605.9998
[2026-01-10 07:34:20] 2026-01-10 06:33:49,262 | INFO     | mean x: 1768018052.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,262 | INFO     | mean y: 3566058.819494585
[2026-01-10 07:34:20] 2026-01-10 06:33:49,262 | INFO     | intersect: -300902320546.22504
[2026-01-10 07:34:20] 2026-01-10 06:33:49,262 | INFO     | chi2: 4.465555510640844
[2026-01-10 07:34:20] 2026-01-10 06:33:49,262 | INFO     | current chi2=4.465555510640844 (change=25.62059390870343 %)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,263 | INFO     | sum of square deviations: 6239923508.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | sum of deviations: 1054666369576.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | mean x: 1768017899.5
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | mean y: 3536911.713235294
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | intersect: -298825289598.8072
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | chi2: 4.438645842539437
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | current chi2=4.438645842539437 (change=0.602605163843234 %)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | right removable region: 271
[2026-01-10 07:34:20] 2026-01-10 06:33:49,264 | INFO     | sum of square deviations: 6590404498.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,265 | INFO     | sum of deviations: 937018548898.0001
[2026-01-10 07:34:20] 2026-01-10 06:33:49,265 | INFO     | mean x: 1768018357.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,265 | INFO     | mean y: 3601812.9783393503
[2026-01-10 07:34:20] 2026-01-10 06:33:49,265 | INFO     | intersect: -251371863198.90634
[2026-01-10 07:34:20] 2026-01-10 06:33:49,266 | INFO     | chi2: 2.3893197276428597
[2026-01-10 07:34:20] 2026-01-10 06:33:49,266 | INFO     | current chi2=2.3893197276428597 (change=60.20289482891443 %)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,266 | INFO     | sum of square deviations: 6239923508.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | sum of deviations: 879569495019.5
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | mean x: 1768018509.5
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | mean y: 3626741.393382353
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | intersect: -249213394203.22363
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | chi2: 2.1790188085153055
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | current chi2=2.1790188085153055 (change=8.801706891485084 %)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,267 | INFO     | left removable region: 20
[2026-01-10 07:34:20] 2026-01-10 06:33:49,268 | INFO     | sum of square deviations: 4903347750.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,268 | INFO     | sum of deviations: 780940579380.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,268 | INFO     | mean x: 1768018479.0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,268 | INFO     | mean y: 3653684.573705179
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | intersect: -281583018471.16034
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | chi2: 0.418790528210277
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | current memory leak: 159.27 B/s (using 251 data points, chi2=0.42)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | could have reported an average CPU frequency of 2668 MHz (13 samples)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | ..............................
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . Timing measurements:
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . get job = 0 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . initial setup = 1 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . payload setup = 2 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . stage-in = 0 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . payload execution = 17188 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . stage-out = 1 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | . log creation = 0 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,269 | INFO     | ..............................
[2026-01-10 07:34:20] 2026-01-10 06:33:49,317 | INFO     | 
[2026-01-10 07:34:20] 2026-01-10 06:33:49,317 | INFO     | job summary report
[2026-01-10 07:34:20] 2026-01-10 06:33:49,317 | INFO     | --------------------------------------------------
[2026-01-10 07:34:20] 2026-01-10 06:33:49,317 | INFO     | PanDA job id: 6963381536
[2026-01-10 07:34:20] 2026-01-10 06:33:49,317 | INFO     | task id: 47962010
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | errors: (none)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | pilot state: finished 
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | transexitcode: 0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | exeerrorcode: 0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | exeerrordiag: 
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | exitcode: 0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | exitmsg: OK
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | cpuconsumptiontime: 129695 s
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | nevents: 900
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | neventsw: 0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | pid: 11625
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | pgrp: 11625
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | corecount: 8
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | event service: False
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | sizes: {0: 2284750, 2: 2285012, 11: 2285040, 17195: 2317905, 17196: 2326929, 17198: 2326985, 17201: 2327359}
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | --------------------------------------------------
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | 
[2026-01-10 07:34:20] 2026-01-10 06:33:49,318 | INFO     | executing command: ls -lF /tmp/job_11010017/atlas/pilot/slots/0
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,328 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,329 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:34:20] 2026-01-10 06:33:49,329 | INFO     | job 6963381536 has completed (purged errors)
[2026-01-10 07:34:20] 2026-01-10 06:33:49,329 | INFO     | overall cleanup function is called
[2026-01-10 07:34:20] 2026-01-10 06:33:50,336 | INFO     | --- collectZombieJob: --- 10, [11625]
[2026-01-10 07:34:20] 2026-01-10 06:33:50,336 | INFO     | zombie collector waiting for pid 11625
[2026-01-10 07:34:20] 2026-01-10 06:33:50,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:34:20] 2026-01-10 06:33:50,336 | INFO     | collected zombie processes
[2026-01-10 07:34:20] 2026-01-10 06:33:50,336 | INFO     | will attempt to kill all subprocesses of pid=11625
[2026-01-10 07:34:20] 2026-01-10 06:33:50,429 | INFO     | process IDs to be killed: [11625] (in reverse order)
[2026-01-10 07:34:20] 2026-01-10 06:33:50,462 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:34:20] 2026-01-10 06:33:50,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:34:20] 2026-01-10 06:33:50,465 | INFO     | did not find any defunct processes belonging to 11625
[2026-01-10 07:34:20] 2026-01-10 06:33:50,468 | INFO     | did not find any defunct processes belonging to 11625
[2026-01-10 07:34:20] 2026-01-10 06:33:50,468 | INFO     | ready for new job
[2026-01-10 07:34:20] 2026-01-10 06:33:50,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:34:20] 2026-01-10 06:33:50,469 | INFO     | ***************************************
[2026-01-10 07:34:20] 2026-01-10 06:33:50,470 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:34:20] 2026-01-10 06:33:50,470 | INFO     | ***************************************
[2026-01-10 07:34:20] 2026-01-10 06:33:50,470 | INFO     | 
[2026-01-10 07:34:20] 2026-01-10 06:33:50,483 | INFO     | architecture information:
[2026-01-10 07:34:20] 2026-01-10 06:33:50,483 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:34:20] 2026-01-10 06:33:50,489 | INFO     | cat /etc/os-release:
[2026-01-10 07:34:20] NAME="CentOS Linux"
[2026-01-10 07:34:20] VERSION="7 (Core)"
[2026-01-10 07:34:20] ID="centos"
[2026-01-10 07:34:20] ID_LIKE="rhel fedora"
[2026-01-10 07:34:20] VERSION_ID="7"
[2026-01-10 07:34:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:34:20] ANSI_COLOR="0;31"
[2026-01-10 07:34:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:34:20] HOME_URL="https://www.centos.org/"
[2026-01-10 07:34:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:34:20] 
[2026-01-10 07:34:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:34:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:34:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:34:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:34:20] 
[2026-01-10 07:34:20] 2026-01-10 06:33:50,489 | INFO     | ***************************************
[2026-01-10 07:34:20] 2026-01-10 06:33:50,992 | INFO     | executing command: df -mP /tmp/job_11010017/atlas/pilot/slots/0
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | INFO     | sufficient remaining disk space (467510755328 B)
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | INFO     | update_server=False
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:34:20] 2026-01-10 06:33:50,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:34:20] 2026-01-10 06:33:50,999 | INFO     | aborting loop
[2026-01-10 07:34:20] 2026-01-10 06:33:51,035 | INFO     | all job control threads have been joined
[2026-01-10 07:34:20] 2026-01-10 06:33:52,003 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,004 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,004 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,040 | INFO     | [job] control thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,078 | INFO     | all data control threads have been joined
[2026-01-10 07:34:20] 2026-01-10 06:33:52,094 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,383 | INFO     | all payload control threads have been joined
[2026-01-10 07:34:20] 2026-01-10 06:33:52,401 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,498 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,505 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,586 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:52,835 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:53,004 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:53,083 | INFO     | [data] control thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:53,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:34:20] 2026-01-10 06:33:53,388 | INFO     | [payload] control thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:53,464 | INFO     | [job] validate thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:57,309 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:33:59,505 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:34:20] 2026-01-10 06:34:01,108 | INFO     | job.realtimelogging is not enabled
[2026-01-10 07:34:20] 2026-01-10 06:34:02,113 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:34:20] 2026-01-10 06:34:02,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2026-01-10 07:34:20] 2026-01-10 06:34:07,456 | INFO     | all workflow threads have been joined
[2026-01-10 07:34:20] 2026-01-10 06:34:07,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:34:20] 2026-01-10 06:34:07,456 | INFO     | traces error code: 0
[2026-01-10 07:34:20] 2026-01-10 06:34:07,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | INFO     | PID=19735 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | INFO     | .. there are 2 such processes running
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:34:20] 2026-01-10 06:34:20,697 | INFO     | [monitor] control thread has ended
[2026-01-10 07:34:20] 2026-01-10 06:34:20,747 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:34:20] 2026-01-10 06:34:20,749 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:34:20] 2026-01-10 06:34:20,750 [wrapper] pilotpid: 19735
[2026-01-10 07:34:20] 2026-01-10 06:34:20,751 [wrapper] Pilot exit status: 0
[2026-01-10 07:34:20] 2026-01-10 06:34:20,755 [wrapper] pandaids: 6963381536
[2026-01-10 07:34:20] 2026-01-10 06:34:20,777 [wrapper] cleanup supervisor_pilot 20941 19736
[2026-01-10 07:34:20] 2026-01-10 06:34:20,778 [wrapper] Test setup, not cleaning
[2026-01-10 07:34:20] 2026-01-10 06:34:20,779 [wrapper] apfmon messages muted
[2026-01-10 07:34:20] 2026-01-10 06:34:20,780 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:34:20] 2026-01-10 06:34:20,781 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:34:20]  *** Error codes and diagnostics ***
[2026-01-10 07:34:20]     "exeErrorCode": 0,
[2026-01-10 07:34:20]     "exeErrorDiag": "",
[2026-01-10 07:34:20]     "pilotErrorCode": 0,
[2026-01-10 07:34:20]     "pilotErrorDiag": "",
[2026-01-10 07:34:20]  *** Listing of results directory ***
[2026-01-10 07:34:20] total 1179076
[2026-01-10 07:34:20] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:21 queuedata.json
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user       100 Jan 10 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:34:20] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 01:06 run_atlas
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user       105 Jan 10 01:06 job.xml
[2026-01-10 07:34:20] -rw-r--r-- 2 mf493845 unix-user 392102156 Jan 10 02:46 EVNT.47962006._000112.pool.root.1
[2026-01-10 07:34:20] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 02:46 start_atlas.sh
[2026-01-10 07:34:20] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 02:46 shared
[2026-01-10 07:34:20] -rw-r--r-- 2 mf493845 unix-user    592618 Jan 10 02:46 input.tar.gz
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      6391 Jan 10 02:46 init_data.xml
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user         0 Jan 10 02:46 boinc_setup_complete
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      8192 Jan 10 02:46 boinc_mmap_file
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user         0 Jan 10 02:46 boinc_lockfile
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      2893 Jan 10 02:46 pandaJob.out
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user    989382 Jan 10 02:46 agis_schedconf.cvmfs.json
[2026-01-10 07:34:20] drwx------ 5 mf493845 unix-user       440 Jan 10 02:46 pilot3
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user 803319303 Jan 10 07:33 HITS.47962010._001646.pool.root.1
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user        95 Jan 10 07:33 pilot_heartbeat.json
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      1029 Jan 10 07:33 memory_monitor_summary.json
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user   1516240 Jan 10 07:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user   1556001 Jan 10 07:33 log.47962010._001646.job.log.tgz.1
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      8582 Jan 10 07:33 heartbeat.json
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user       820 Jan 10 07:34 pilotlog.txt
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user   2477057 Jan 10 07:34 log.47962010._001646.job.log.1
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user       353 Jan 10 07:34 output.list
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user       620 Jan 10 07:34 runtime_log
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user   4055040 Jan 10 07:34 result.tar.gz
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user      9221 Jan 10 07:34 runtime_log.err
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user       650 Jan 10 07:34 Ch9KDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmncmKDmgIA1xm.diag
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user     21619 Jan 10 07:34 stderr.txt
[2026-01-10 07:34:20] HITS file was successfully produced:
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user 803319303 Jan 10 07:33 shared/HITS.pool.root.1
[2026-01-10 07:34:20]  *** Contents of shared directory: ***
[2026-01-10 07:34:20] total 1171964
[2026-01-10 07:34:20] -rw-r--r-- 2 mf493845 unix-user 392102156 Jan 10 02:46 ATLAS.root_0
[2026-01-10 07:34:20] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 02:46 start_atlas.sh
[2026-01-10 07:34:20] -rw-r--r-- 2 mf493845 unix-user    592618 Jan 10 02:46 input.tar.gz
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user 803319303 Jan 10 07:33 HITS.pool.root.1
[2026-01-10 07:34:20] -rw------- 1 mf493845 unix-user   4055040 Jan 10 07:34 result.tar.gz
07:34:22 (14972): run_atlas exited; CPU time 129868.181608
07:34:22 (14972): called boinc_finish(0)

</stderr_txt>
]]>

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