Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:20:44 (2113626): wrapper (7.7.26015): starting
13:20:44 (2113626): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 13:20:44] Arguments: --nthreads 4
[2026-01-10 13:20:44] Threads: 4
[2026-01-10 13:20:44] Checking for CVMFS
[2026-01-10 13:20:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:20:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:20:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:20:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:20:44] 2.9.2.0 1281234 3135 96644 154980 1 56 22965492 36864001 0 130560 0 2167420 99.989 119288 2539 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 13:20:44] CVMFS is ok
[2026-01-10 13:20:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 13:20:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 13:20:44] Further information can be found at the LHC@home message board.
[2026-01-10 13:20:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:20:44] Checking for apptainer binary...
[2026-01-10 13:20:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:20:44] Running /usr/bin/apptainer --version
[2026-01-10 13:20:44] apptainer version 1.4.1-1.1
[2026-01-10 13:20:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:20:44] thA338
[2026-01-10 13:20:44] apptainer works
[2026-01-10 13:20:44] Set ATHENA_PROC_NUMBER=4
[2026-01-10 13:20:44] Set ATHENA_CORE_NUMBER=4
[2026-01-10 13:20:44] Starting ATLAS job with PandaID=6963381381
[2026-01-10 13:20:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:50:35]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:50:35] 2026-01-10 19:49:46,395 | INFO     | all payload control threads have been joined
[2026-01-10 20:50:35] 2026-01-10 19:49:46,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:50:35] 2026-01-10 19:49:46,643 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:50:35] 2026-01-10 19:49:46,643 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:50:35] 2026-01-10 19:49:46,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:50:35] 2026-01-10 19:49:46,644 | INFO     | will abort loop
[2026-01-10 20:50:35] 2026-01-10 19:49:46,800 | INFO     | all data control threads have been joined
[2026-01-10 20:50:35] 2026-01-10 19:49:46,808 | INFO     | all job control threads have been joined
[2026-01-10 20:50:35] 2026-01-10 19:49:47,215 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:47,237 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:47,401 | INFO     | [payload] control thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:47,649 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:47,806 | INFO     | [data] control thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:47,814 | INFO     | [job] control thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:47,877 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:48,030 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:48,210 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:48,473 | INFO     | [job] validate thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:48,577 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:48,577 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:48,583 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:49,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:50:35] 2026-01-10 19:49:50,151 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:50,214 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:49:56,617 | INFO     | job.realtimelogging is not enabled
[2026-01-10 20:50:35] 2026-01-10 19:49:57,623 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:50:35] 2026-01-10 19:50:15,802 | INFO     | PID=2117435 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:50:35] 2026-01-10 19:50:15,803 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:50:35] 2026-01-10 19:50:15,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:50:35] 2026-01-10 19:50:15,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:50:35] 2026-01-10 19:50:28,151 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:50:35] 2026-01-10 19:50:29,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544821417792)>', '<ExcThread(monitor, started 140543669561088)>']
[2026-01-10 20:50:35] 2026-01-10 19:50:30,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:50:35] 2026-01-10 19:50:30,883 | INFO     | [monitor] control thread has ended
[2026-01-10 20:50:35] 2026-01-10 19:50:34,951 | INFO     | all workflow threads have been joined
[2026-01-10 20:50:35] 2026-01-10 19:50:34,952 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:50:35] 2026-01-10 19:50:34,952 | INFO     | traces error code: 0
[2026-01-10 20:50:35] 2026-01-10 19:50:34,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:50:35] 2026-01-10 19:50:35,032 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:50:35] 2026-01-10 19:50:35,036 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:50:35] 2026-01-10 19:50:35,040 [wrapper] pilotpid: 2117435
[2026-01-10 20:50:35] 2026-01-10 19:50:35,044 [wrapper] Pilot exit status: 0
[2026-01-10 20:50:35] 2026-01-10 19:50:35,055 [wrapper] pandaids: 6963381381
[2026-01-10 20:50:35] 2026-01-10 19:50:35,079 [wrapper] cleanup supervisor_pilot 2171007 2117436
[2026-01-10 20:50:35] 2026-01-10 19:50:35,083 [wrapper] Test setup, not cleaning
[2026-01-10 20:50:35] 2026-01-10 19:50:35,087 [wrapper] apfmon messages muted
[2026-01-10 20:50:35] 2026-01-10 19:50:35,091 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:50:35] 2026-01-10 19:50:35,094 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:50:35]  *** Error codes and diagnostics ***
[2026-01-10 20:50:35]     "exeErrorCode": 0,
[2026-01-10 20:50:35]     "exeErrorDiag": "",
[2026-01-10 20:50:35]     "pilotErrorCode": 0,
[2026-01-10 20:50:35]     "pilotErrorDiag": "",
[2026-01-10 20:50:35]  *** Listing of results directory ***
[2026-01-10 20:50:35] total 1194568
[2026-01-10 20:50:35] -rwx------ 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc       100 Jan 10 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:50:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 13:20 run_atlas
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc       105 Jan 10 13:20 job.xml
[2026-01-10 20:50:35] -rw-r--r-- 2 boinc boinc 393249494 Jan 10 13:20 EVNT.47962006._000025.pool.root.1
[2026-01-10 20:50:35] -rw-r--r-- 2 boinc boinc    592611 Jan 10 13:20 input.tar.gz
[2026-01-10 20:50:35] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:20 start_atlas.sh
[2026-01-10 20:50:35] drwxrwx--x 2 boinc boinc      4096 Jan 10 13:20 shared
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:20 boinc_setup_complete
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc      6376 Jan 10 13:20 init_data.xml
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:20 boinc_lockfile
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc      2892 Jan 10 13:20 pandaJob.out
[2026-01-10 20:50:35] -rw------- 1 boinc boinc    989556 Jan 10 13:20 agis_schedconf.cvmfs.json
[2026-01-10 20:50:35] drwx------ 5 boinc boinc      4096 Jan 10 13:20 pilot3
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc       533 Jan 10 20:45 boinc_task_state.xml
[2026-01-10 20:50:35] -rw------- 1 boinc boinc        95 Jan 10 20:49 pilot_heartbeat.json
[2026-01-10 20:50:35] -rw------- 1 boinc boinc 815966753 Jan 10 20:49 HITS.47962010._001514.pool.root.1
[2026-01-10 20:50:35] -rw------- 1 boinc boinc      1025 Jan 10 20:49 memory_monitor_summary.json
[2026-01-10 20:50:35] -rw------- 1 boinc boinc   1516240 Jan 10 20:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:50:35] -rw------- 1 boinc boinc   1262158 Jan 10 20:49 log.47962010._001514.job.log.tgz.1
[2026-01-10 20:50:35] -rw------- 1 boinc boinc      8562 Jan 10 20:49 heartbeat.json
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc        29 Jan 10 20:50 wrapper_checkpoint.txt
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc      8192 Jan 10 20:50 boinc_mmap_file
[2026-01-10 20:50:35] -rw------- 1 boinc boinc      5010 Jan 10 20:50 pilotlog.txt
[2026-01-10 20:50:35] -rw------- 1 boinc boinc   3796308 Jan 10 20:50 log.47962010._001514.job.log.1
[2026-01-10 20:50:35] -rw------- 1 boinc boinc       353 Jan 10 20:50 output.list
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc       620 Jan 10 20:50 runtime_log
[2026-01-10 20:50:35] -rw------- 1 boinc boinc   5079040 Jan 10 20:50 result.tar.gz
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc      8898 Jan 10 20:50 runtime_log.err
[2026-01-10 20:50:35] -rw------- 1 boinc boinc       666 Jan 10 20:50 pRZLDmRvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPRhKDmjYpoAn.diag
[2026-01-10 20:50:35] -rw-r--r-- 1 boinc boinc      7386 Jan 10 20:50 stderr.txt
[2026-01-10 20:50:35] HITS file was successfully produced:
[2026-01-10 20:50:35] -rw------- 1 boinc boinc 815966753 Jan 10 20:49 shared/HITS.pool.root.1
[2026-01-10 20:50:35]  *** Contents of shared directory: ***
[2026-01-10 20:50:35] total 1186444
[2026-01-10 20:50:35] -rw-r--r-- 2 boinc boinc 393249494 Jan 10 13:20 ATLAS.root_0
[2026-01-10 20:50:35] -rw-r--r-- 2 boinc boinc    592611 Jan 10 13:20 input.tar.gz
[2026-01-10 20:50:35] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:20 start_atlas.sh
[2026-01-10 20:50:35] -rw------- 1 boinc boinc 815966753 Jan 10 20:49 HITS.pool.root.1
[2026-01-10 20:50:35] -rw------- 1 boinc boinc   5079040 Jan 10 20:50 result.tar.gz
20:50:36 (2113626): run_atlas exited; CPU time 105589.009352
20:50:36 (2113626): called boinc_finish(0)

</stderr_txt>
]]>

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