Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:34:35 (722061): wrapper (7.7.26015): starting
17:34:35 (722061): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 17:34:35] Arguments: --nthreads 12
[2026-01-09 17:34:35] Threads: 12
[2026-01-09 17:34:35] Checking for CVMFS
[2026-01-09 17:34:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:34:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:34:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:34:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:34:37] 2.13.3.0 7586 22114 157100 154959 0 64 31681763 40960000 6610 16776704 0 11357764 99.557 15550786 38877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:34:37] CVMFS is ok
[2026-01-09 17:34:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:34:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:34:37] Further information can be found at the LHC@home message board.
[2026-01-09 17:34:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:34:37] Checking for apptainer binary...
[2026-01-09 17:34:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:34:37] Running /usr/bin/apptainer --version
[2026-01-09 17:34:37] apptainer version 1.4.5-2.el9
[2026-01-09 17:34:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:34:38] c-211-6.aglt2.org
[2026-01-09 17:34:38] apptainer works
[2026-01-09 17:34:38] Set ATHENA_PROC_NUMBER=12
[2026-01-09 17:34:38] Set ATHENA_CORE_NUMBER=12
[2026-01-09 17:34:38] Starting ATLAS job with PandaID=6963381475
[2026-01-09 17:34:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 09:11:01]  *** The last 200 lines of the pilot log: ***
[2026-01-11 09:11:01] 2026-01-11 14:09:52,542 | INFO     | time since job start (142468s) is within the limit (349056.0s)
[2026-01-11 09:11:01] 2026-01-11 14:09:52,643 | INFO     | monitor loop #7791: job 0:6963381475 is in state 'finished'
[2026-01-11 09:11:01] 2026-01-11 14:09:52,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:11:01] 2026-01-11 14:09:53,275 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 09:11:01] 2026-01-11 14:09:53,301 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2634.574
[2026-01-11 09:11:01] 2026-01-11 14:09:53,323 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963381475/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 09:11:01] 2026-01-11 14:09:53,324 | INFO     | extracted standard info from prmon json
[2026-01-11 09:11:01] 2026-01-11 14:09:53,324 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 09:11:01] 2026-01-11 14:09:53,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 09:11:01] 2026-01-11 14:09:53,426 | INFO     | fitting pss+swap vs Time
[2026-01-11 09:11:01] 2026-01-11 14:09:53,450 | INFO     | sum of square deviations: 3942520220083.433
[2026-01-11 09:11:01] 2026-01-11 14:09:53,781 | INFO     | sum of deviations: 18823350205531.406
[2026-01-11 09:11:01] 2026-01-11 14:09:53,781 | INFO     | mean x: 1768069387.6208227
[2026-01-11 09:11:01] 2026-01-11 14:09:53,781 | INFO     | mean y: 3490768.2219365896
[2026-01-11 09:11:01] 2026-01-11 14:09:53,781 | INFO     | intersect: -8438061186.62432
[2026-01-11 09:11:01] 2026-01-11 14:09:53,784 | INFO     | chi2: 13.157078417478147
[2026-01-11 09:11:01] 2026-01-11 14:09:53,788 | INFO     | sum of square deviations: 3917242298755.4824
[2026-01-11 09:11:01] 2026-01-11 14:09:53,942 | INFO     | sum of deviations: 19848038542365.777
[2026-01-11 09:11:01] 2026-01-11 14:09:53,942 | INFO     | mean x: 1768069235.1382568
[2026-01-11 09:11:01] 2026-01-11 14:09:53,942 | INFO     | mean y: 3496949.5349935596
[2026-01-11 09:11:01] 2026-01-11 14:09:53,943 | INFO     | intersect: -8955026329.90175
[2026-01-11 09:11:01] 2026-01-11 14:09:53,952 | INFO     | chi2: 9.502195172933437
[2026-01-11 09:11:01] 2026-01-11 14:09:53,952 | INFO     | current chi2=9.502195172933437 (change=27.778836065075694 %)
[2026-01-11 09:11:01] 2026-01-11 14:09:53,955 | INFO     | sum of square deviations: 3892072705038.623
[2026-01-11 09:11:01] 2026-01-11 14:09:54,091 | INFO     | sum of deviations: 20626771453874.08
[2026-01-11 09:11:01] 2026-01-11 14:09:54,092 | INFO     | mean x: 1768069082.655766
[2026-01-11 09:11:01] 2026-01-11 14:09:54,092 | INFO     | mean y: 3501666.0688468157
[2026-01-11 09:11:01] 2026-01-11 14:09:54,092 | INFO     | intersect: -9366713036.084146
[2026-01-11 09:11:01] 2026-01-11 14:09:54,095 | INFO     | chi2: 7.17083216688711
[2026-01-11 09:11:01] 2026-01-11 14:09:54,095 | INFO     | current chi2=7.17083216688711 (change=24.534993900010665 %)
[2026-01-11 09:11:01] 2026-01-11 14:09:54,095 | INFO     | right removable region: 2323
[2026-01-11 09:11:01] 2026-01-11 14:09:54,098 | INFO     | sum of square deviations: 3917230736815.481
[2026-01-11 09:11:01] 2026-01-11 14:09:54,324 | INFO     | sum of deviations: 17726144077862.043
[2026-01-11 09:11:01] 2026-01-11 14:09:54,325 | INFO     | mean x: 1768069540.1382568
[2026-01-11 09:11:01] 2026-01-11 14:09:54,325 | INFO     | mean y: 3497384.683125805
[2026-01-11 09:11:01] 2026-01-11 14:09:54,326 | INFO     | intersect: -7997321947.6109915
[2026-01-11 09:11:01] 2026-01-11 14:09:54,329 | INFO     | chi2: 9.359573978676618
[2026-01-11 09:11:01] 2026-01-11 14:09:54,329 | INFO     | current chi2=9.359573978676618 (change=28.862824392357815 %)
[2026-01-11 09:11:01] 2026-01-11 14:09:54,338 | INFO     | sum of square deviations: 3892050148759.8594
[2026-01-11 09:11:01] 2026-01-11 14:09:54,580 | INFO     | time since job start (142470s) is within the limit (349056.0s)
[2026-01-11 09:11:01] 2026-01-11 14:09:54,744 | INFO     | sum of deviations: 17167757432349.906
[2026-01-11 09:11:01] 2026-01-11 14:09:54,744 | INFO     | mean x: 1768069692.6540449
[2026-01-11 09:11:01] 2026-01-11 14:09:54,744 | INFO     | mean y: 3500765.0408777967
[2026-01-11 09:11:01] 2026-01-11 14:09:54,745 | INFO     | intersect: -7795420226.931914
[2026-01-11 09:11:01] 2026-01-11 14:09:54,751 | INFO     | chi2: 8.37545417072989
[2026-01-11 09:11:01] 2026-01-11 14:09:54,751 | INFO     | current chi2=8.37545417072989 (change=10.514579084355674 %)
[2026-01-11 09:11:01] 2026-01-11 14:09:54,751 | INFO     | left removable region: 20
[2026-01-11 09:11:01] 2026-01-11 14:09:54,754 | INFO     | sum of square deviations: 3787500601689.704
[2026-01-11 09:11:01] 2026-01-11 14:09:55,027 | INFO     | sum of deviations: 18580261772534.53
[2026-01-11 09:11:01] 2026-01-11 14:09:55,027 | INFO     | mean x: 1768069662.2023447
[2026-01-11 09:11:01] 2026-01-11 14:09:55,027 | INFO     | mean y: 3515302.4216239685
[2026-01-11 09:11:01] 2026-01-11 14:09:55,027 | INFO     | intersect: -8670066727.147026
[2026-01-11 09:11:01] 2026-01-11 14:09:55,034 | INFO     | chi2: 2.050854131584276
[2026-01-11 09:11:01] 2026-01-11 14:09:55,034 | INFO     | current memory leak: 4.91 B/s (using 2303 data points, chi2=2.05)
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | could have reported an average CPU frequency of 2633 MHz (80 samples)
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | ..............................
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | . Timing measurements:
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | . get job = 0 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | . initial setup = 4 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | . payload setup = 29 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | . stage-in = 0 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,036 | INFO     | . payload execution = 142374 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,037 | INFO     | . stage-out = 6 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,037 | INFO     | . log creation = 2 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,037 | INFO     | ..............................
[2026-01-11 09:11:01] 2026-01-11 14:09:55,199 | INFO     | 
[2026-01-11 09:11:01] 2026-01-11 14:09:55,199 | INFO     | job summary report
[2026-01-11 09:11:01] 2026-01-11 14:09:55,199 | INFO     | --------------------------------------------------
[2026-01-11 09:11:01] 2026-01-11 14:09:55,199 | INFO     | PanDA job id: 6963381475
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | task id: 47962010
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | errors: (none)
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | pilot state: finished 
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | transexitcode: 0
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | exeerrorcode: 0
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | exeerrordiag: 
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | exitcode: 0
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | exitmsg: OK
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | cpuconsumptiontime: 354223 s
[2026-01-11 09:11:01] 2026-01-11 14:09:55,200 | INFO     | nevents: 900
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | neventsw: 0
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | pid: 734066
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | pgrp: 734066
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | corecount: 12
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | event service: False
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | sizes: {0: 2284395, 1: 2284479, 2: 2284678, 13: 2284678, 22: 2284996, 24: 2285024, 142408: 2374886, 142409: 2374885, 142415: 2383935, 142418: 2383991, 142438: 2384
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | --------------------------------------------------
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | 
[2026-01-11 09:11:01] 2026-01-11 14:09:55,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 09:11:01] 2026-01-11 14:09:55,436 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,436 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,436 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,436 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 09:11:01] 2026-01-11 14:09:55,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 09:11:01] 2026-01-11 14:09:55,438 | INFO     | job 6963381475 has completed (purged errors)
[2026-01-11 09:11:01] 2026-01-11 14:09:55,438 | INFO     | overall cleanup function is called
[2026-01-11 09:11:01] 2026-01-11 14:09:56,479 | INFO     | --- collectZombieJob: --- 10, [734066]
[2026-01-11 09:11:01] 2026-01-11 14:09:56,479 | INFO     | zombie collector waiting for pid 734066
[2026-01-11 09:11:01] 2026-01-11 14:09:56,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 09:11:01] 2026-01-11 14:09:56,480 | INFO     | collected zombie processes
[2026-01-11 09:11:01] 2026-01-11 14:09:56,480 | INFO     | will attempt to kill all subprocesses of pid=734066
[2026-01-11 09:11:01] 2026-01-11 14:09:57,143 | INFO     | process IDs to be killed: [734066] (in reverse order)
[2026-01-11 09:11:01] 2026-01-11 14:09:57,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 09:11:01] 2026-01-11 14:09:57,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 09:11:01] 2026-01-11 14:09:57,580 | INFO     | did not find any defunct processes belonging to 734066
[2026-01-11 09:11:01] 2026-01-11 14:09:57,618 | INFO     | did not find any defunct processes belonging to 734066
[2026-01-11 09:11:01] 2026-01-11 14:09:57,618 | INFO     | ready for new job
[2026-01-11 09:11:01] 2026-01-11 14:09:57,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 09:11:01] 2026-01-11 14:09:57,645 | INFO     | ***************************************
[2026-01-11 09:11:01] 2026-01-11 14:09:57,667 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 09:11:01] 2026-01-11 14:09:57,667 | INFO     | ***************************************
[2026-01-11 09:11:01] 2026-01-11 14:09:57,667 | INFO     | 
[2026-01-11 09:11:01] 2026-01-11 14:09:57,671 | INFO     | architecture information:
[2026-01-11 09:11:01] 2026-01-11 14:09:57,685 | INFO     | executing command: cat /etc/os-release
[2026-01-11 09:11:01] 2026-01-11 14:09:57,820 | INFO     | cat /etc/os-release:
[2026-01-11 09:11:01] NAME="CentOS Linux"
[2026-01-11 09:11:01] VERSION="7 (Core)"
[2026-01-11 09:11:01] ID="centos"
[2026-01-11 09:11:01] ID_LIKE="rhel fedora"
[2026-01-11 09:11:01] VERSION_ID="7"
[2026-01-11 09:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 09:11:01] ANSI_COLOR="0;31"
[2026-01-11 09:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 09:11:01] HOME_URL="https://www.centos.org/"
[2026-01-11 09:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 09:11:01] 
[2026-01-11 09:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 09:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 09:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 09:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 09:11:01] 
[2026-01-11 09:11:01] 2026-01-11 14:09:57,821 | INFO     | ***************************************
[2026-01-11 09:11:01] 2026-01-11 14:09:58,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 09:11:01] 2026-01-11 14:09:58,451 | INFO     | sufficient remaining disk space (63563628544 B)
[2026-01-11 09:11:01] 2026-01-11 14:09:58,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 09:11:01] 2026-01-11 14:09:58,451 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 09:11:01] 2026-01-11 14:09:58,451 | INFO     | update_server=False
[2026-01-11 09:11:01] 2026-01-11 14:09:58,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 09:11:01] 2026-01-11 14:09:58,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 09:11:01] 2026-01-11 14:09:58,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:11:01] 2026-01-11 14:09:58,740 | INFO     | aborting loop
[2026-01-11 09:11:01] 2026-01-11 14:09:58,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 09:11:01] 2026-01-11 14:09:59,085 | INFO     | all data control threads have been joined
[2026-01-11 09:11:01] 2026-01-11 14:09:59,457 | INFO     | [job] retrieve thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:09:59,526 | INFO     | [payload] failed_post thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:09:59,635 | INFO     | all payload control threads have been joined
[2026-01-11 09:11:01] 2026-01-11 14:09:59,743 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:09:59,746 | INFO     | [job] job monitor thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:09:59,814 | INFO     | all job control threads have been joined
[2026-01-11 09:11:01] 2026-01-11 14:10:00,091 | INFO     | [data] control thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:11:01] 2026-01-11 14:10:00,243 | INFO     | [payload] validate_post thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,323 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,442 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,459 | INFO     | [data] copytool_out thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,467 | INFO     | [job] validate thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,640 | INFO     | [payload] control thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,644 | INFO     | [data] copytool_in thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,820 | INFO     | [job] control thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:00,904 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:01,219 | INFO     | [job] queue monitor thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:02,895 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 09:11:01] 2026-01-11 14:10:28,089 | INFO     | PID=725990 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 09:11:01] 2026-01-11 14:10:28,090 | INFO     | .. there are 7 such processes running
[2026-01-11 09:11:01] 2026-01-11 14:10:28,091 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 09:11:01] 2026-01-11 14:10:28,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 09:11:01] 2026-01-11 14:10:28,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 09:11:01] 2026-01-11 14:10:53,683 | INFO     | [monitor] cgroup control has ended
[2026-01-11 09:11:01] 2026-01-11 14:10:54,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985254623040)>', '<ExcThread(monitor, started 139984904374016)>']
[2026-01-11 09:11:01] 2026-01-11 14:10:55,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 09:11:01] 2026-01-11 14:10:55,253 | INFO     | [monitor] control thread has ended
[2026-01-11 09:11:01] 2026-01-11 14:10:59,763 | INFO     | all workflow threads have been joined
[2026-01-11 09:11:01] 2026-01-11 14:10:59,787 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 09:11:01] 2026-01-11 14:10:59,788 | INFO     | traces error code: 0
[2026-01-11 09:11:01] 2026-01-11 14:10:59,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 09:11:01] 2026-01-11 14:11:00,135 [wrapper] ==== pilot stdout END ====
[2026-01-11 09:11:01] 2026-01-11 14:11:00,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 09:11:01] 2026-01-11 14:11:00,235 [wrapper] pilotpid: 725990
[2026-01-11 09:11:01] 2026-01-11 14:11:00,258 [wrapper] Pilot exit status: 0
[2026-01-11 09:11:01] 2026-01-11 14:11:00,345 [wrapper] pandaids: 6963381475
[2026-01-11 09:11:01] 2026-01-11 14:11:00,837 [wrapper] cleanup supervisor_pilot 4192482 725991
[2026-01-11 09:11:01] 2026-01-11 14:11:00,876 [wrapper] Test setup, not cleaning
[2026-01-11 09:11:01] 2026-01-11 14:11:00,919 [wrapper] apfmon messages muted
[2026-01-11 09:11:01] 2026-01-11 14:11:00,923 [wrapper] ==== wrapper stdout END ====
[2026-01-11 09:11:01] 2026-01-11 14:11:00,926 [wrapper] ==== wrapper stderr END ====
[2026-01-11 09:11:01]  *** Error codes and diagnostics ***
[2026-01-11 09:11:01]     "exeErrorCode": 0,
[2026-01-11 09:11:01]     "exeErrorDiag": "",
[2026-01-11 09:11:01]     "pilotErrorCode": 0,
[2026-01-11 09:11:01]     "pilotErrorDiag": "",
[2026-01-11 09:11:01]  *** Listing of results directory ***
[2026-01-11 09:11:01] total 1198852
[2026-01-11 09:11:01] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 09:11:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:34 run_atlas
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:34 job.xml
[2026-01-11 09:11:01] -rw-r--r--. 2 boincer umatlas 391182854 Jan  9 17:34 EVNT.47962006._000032.pool.root.1
[2026-01-11 09:11:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:34 start_atlas.sh
[2026-01-11 09:11:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:34 shared
[2026-01-11 09:11:01] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 17:34 input.tar.gz
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:34 boinc_lockfile
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 17:34 pandaJob.out
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas        57 Jan  9 17:34 setup.sh.local
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas    989375 Jan  9 17:35 agis_schedconf.cvmfs.json
[2026-01-11 09:11:01] drwx------. 5 boincer umatlas      4096 Jan  9 17:35 pilot3
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas       534 Jan 11 08:44 boinc_task_state.xml
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas      6612 Jan 11 09:02 init_data.xml
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas 791667873 Jan 11 09:08 HITS.47962010._001591.pool.root.1
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas      1058 Jan 11 09:09 memory_monitor_summary.json
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas   1516240 Jan 11 09:09 agis_ddmendpoints.agis.ALL.json
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas   3451950 Jan 11 09:09 log.47962010._001591.job.log.tgz.1
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas      8632 Jan 11 09:09 heartbeat.json
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas        95 Jan 11 09:10 pilot_heartbeat.json
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas      4822 Jan 11 09:10 pilotlog.txt
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 09:11 boinc_mmap_file
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas        30 Jan 11 09:11 wrapper_checkpoint.txt
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas  16972386 Jan 11 09:11 log.47962010._001591.job.log.1
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas       353 Jan 11 09:11 output.list
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas       620 Jan 11 09:11 runtime_log
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas  20449280 Jan 11 09:11 result.tar.gz
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas      9341 Jan 11 09:11 runtime_log.err
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas       663 Jan 11 09:11 A6iKDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRcmKDmNFQCWo.diag
[2026-01-11 09:11:01] -rw-r--r--. 1 boincer umatlas     21260 Jan 11 09:11 stderr.txt
[2026-01-11 09:11:01] HITS file was successfully produced:
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas 791667873 Jan 11 09:08 shared/HITS.pool.root.1
[2026-01-11 09:11:01]  *** Contents of shared directory: ***
[2026-01-11 09:11:01] total 1175704
[2026-01-11 09:11:01] -rw-r--r--. 2 boincer umatlas 391182854 Jan  9 17:34 ATLAS.root_0
[2026-01-11 09:11:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:34 start_atlas.sh
[2026-01-11 09:11:01] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 17:34 input.tar.gz
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas 791667873 Jan 11 09:08 HITS.pool.root.1
[2026-01-11 09:11:01] -rw-------. 1 boincer umatlas  20449280 Jan 11 09:11 result.tar.gz
09:11:03 (722061): run_atlas exited; CPU time 357013.640428
09:11:03 (722061): called boinc_finish(0)

</stderr_txt>
]]>

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