Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:02:42 (22596): wrapper (7.7.26015): starting
05:02:42 (22596): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 05:02:42] Arguments: --nthreads 8
[2026-01-10 05:02:42] Threads: 8
[2026-01-10 05:02:42] Checking for CVMFS
[2026-01-10 05:02:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:02:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:02:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:02:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:02:46] 2.11.2.0 32209 36332 122176 154966 0 101 20381956 25165825 1088 130560 0 17641922 99.830 9887021 4049 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 05:02:46] CVMFS is ok
[2026-01-10 05:02:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:02:46] Checking for apptainer binary...
[2026-01-10 05:02:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:02:46] Running /usr/bin/apptainer --version
[2026-01-10 05:02:46] apptainer version 1.3.2-1.el7
[2026-01-10 05:02:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:03:03] cg-vwn500.simple-grid.lan
[2026-01-10 05:03:03] apptainer works
[2026-01-10 05:03:03] Set ATHENA_PROC_NUMBER=8
[2026-01-10 05:03:03] Set ATHENA_CORE_NUMBER=8
[2026-01-10 05:03:03] Starting ATLAS job with PandaID=6963375874
[2026-01-10 05:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:45:17]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:45:17] 2026-01-11 02:44:02,960 | INFO     | monitor loop #5525: job 0:6963375874 is in state 'finished'
[2026-01-11 03:45:17] 2026-01-11 02:44:02,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:45:17] 2026-01-11 02:44:04,245 | INFO     | time since job start (81439s) is within the limit (349056.0s)
[2026-01-11 03:45:17] 2026-01-11 02:44:05,476 | INFO     | monitor loop #5526: job 0:6963375874 is in state 'finished'
[2026-01-11 03:45:17] 2026-01-11 02:44:05,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:45:17] 2026-01-11 02:44:06,252 | INFO     | time since job start (81441s) is within the limit (349056.0s)
[2026-01-11 03:45:17] 2026-01-11 02:44:07,981 | INFO     | monitor loop #5527: job 0:6963375874 is in state 'finished'
[2026-01-11 03:45:17] 2026-01-11 02:44:07,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:45:17] 2026-01-11 02:44:08,260 | INFO     | time since job start (81443s) is within the limit (349056.0s)
[2026-01-11 03:45:17] 2026-01-11 02:44:10,266 | INFO     | time since job start (81445s) is within the limit (349056.0s)
[2026-01-11 03:45:17] 2026-01-11 02:44:10,489 | INFO     | monitor loop #5528: job 0:6963375874 is in state 'finished'
[2026-01-11 03:45:17] 2026-01-11 02:44:10,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:45:17] 2026-01-11 02:44:11,454 | INFO     | PID=26336 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 03:45:17] 2026-01-11 02:44:11,454 | INFO     | .. there are 2 such processes running
[2026-01-11 03:45:17] 2026-01-11 02:44:12,458 | INFO     | time since job start (81447s) is within the limit (349056.0s)
[2026-01-11 03:45:17] 2026-01-11 02:44:12,857 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 03:45:17] 2026-01-11 02:44:12,859 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-11 03:45:17] 2026-01-11 02:44:12,861 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963375874/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:45:17] 2026-01-11 02:44:12,862 | INFO     | extracted standard info from prmon json
[2026-01-11 03:45:17] 2026-01-11 02:44:12,862 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:45:17] 2026-01-11 02:44:12,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:45:17] 2026-01-11 02:44:12,902 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:45:17] 2026-01-11 02:44:12,904 | INFO     | sum of square deviations: 719685994244.4304
[2026-01-11 03:45:17] 2026-01-11 02:44:13,002 | INFO     | sum of deviations: 2536328928230.2026
[2026-01-11 03:45:17] 2026-01-11 02:44:13,002 | INFO     | mean x: 1768058939.4025679
[2026-01-11 03:45:17] 2026-01-11 02:44:13,002 | INFO     | mean y: 2789524.4086102718
[2026-01-11 03:45:17] 2026-01-11 02:44:13,002 | INFO     | intersect: -6228232158.222179
[2026-01-11 03:45:17] 2026-01-11 02:44:13,004 | INFO     | chi2: 36.01917687518053
[2026-01-11 03:45:17] 2026-01-11 02:44:13,006 | INFO     | sum of square deviations: 711563583160.3428
[2026-01-11 03:45:17] 2026-01-11 02:44:13,027 | INFO     | monitor loop #5529: job 0:6963375874 is in state 'finished'
[2026-01-11 03:45:17] 2026-01-11 02:44:13,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:45:17] 2026-01-11 02:44:13,082 | INFO     | sum of deviations: 2978187507519.318
[2026-01-11 03:45:17] 2026-01-11 02:44:13,083 | INFO     | mean x: 1768058786.9059894
[2026-01-11 03:45:17] 2026-01-11 02:44:13,083 | INFO     | mean y: 2797819.9219105383
[2026-01-11 03:45:17] 2026-01-11 02:44:13,083 | INFO     | intersect: -7397258501.589742
[2026-01-11 03:45:17] 2026-01-11 02:44:13,085 | INFO     | chi2: 32.582438857414495
[2026-01-11 03:45:17] 2026-01-11 02:44:13,085 | INFO     | current chi2=32.582438857414495 (change=9.5414118697814 %)
[2026-01-11 03:45:17] 2026-01-11 02:44:13,085 | INFO     | right removable region: 1318
[2026-01-11 03:45:17] 2026-01-11 02:44:13,087 | INFO     | sum of square deviations: 711562854210.3425
[2026-01-11 03:45:17] 2026-01-11 02:44:13,153 | INFO     | sum of deviations: 1981494052837.3374
[2026-01-11 03:45:17] 2026-01-11 02:44:13,154 | INFO     | mean x: 1768059091.9059894
[2026-01-11 03:45:17] 2026-01-11 02:44:13,154 | INFO     | mean y: 2799940.5269143293
[2026-01-11 03:45:17] 2026-01-11 02:44:13,154 | INFO     | intersect: -4920726568.68723
[2026-01-11 03:45:17] 2026-01-11 02:44:13,155 | INFO     | chi2: 31.033006512250175
[2026-01-11 03:45:17] 2026-01-11 02:44:13,156 | INFO     | current chi2=31.033006512250175 (change=13.843099136355159 %)
[2026-01-11 03:45:17] 2026-01-11 02:44:13,156 | INFO     | left removable region: 10
[2026-01-11 03:45:17] 2026-01-11 02:44:13,157 | INFO     | sum of square deviations: 693908445383.2349
[2026-01-11 03:45:17] 2026-01-11 02:44:13,217 | INFO     | sum of deviations: 2022473659128.3638
[2026-01-11 03:45:17] 2026-01-11 02:44:13,217 | INFO     | mean x: 1768059061.4136086
[2026-01-11 03:45:17] 2026-01-11 02:44:13,217 | INFO     | mean y: 2819804.0695718653
[2026-01-11 03:45:17] 2026-01-11 02:44:13,218 | INFO     | intersect: -5150385785.63521
[2026-01-11 03:45:17] 2026-01-11 02:44:13,219 | INFO     | chi2: 22.693134179850762
[2026-01-11 03:45:17] 2026-01-11 02:44:13,219 | INFO     | current memory leak: 2.91 B/s (using 1308 data points, chi2=22.69)
[2026-01-11 03:45:17] 2026-01-11 02:44:13,220 | INFO     | could have reported an average CPU frequency of 2249 MHz (45 samples)
[2026-01-11 03:45:17] 2026-01-11 02:44:13,221 | INFO     | ..............................
[2026-01-11 03:45:17] 2026-01-11 02:44:13,221 | INFO     | . Timing measurements:
[2026-01-11 03:45:17] 2026-01-11 02:44:13,221 | INFO     | . get job = 0 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,221 | INFO     | . initial setup = 9 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,221 | INFO     | . payload setup = 173 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,222 | INFO     | . stage-in = 0 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,222 | INFO     | . payload execution = 80933 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,222 | INFO     | . stage-out = 5 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,222 | INFO     | . log creation = 2 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,222 | INFO     | ..............................
[2026-01-11 03:45:17] 2026-01-11 02:44:13,482 | INFO     | 
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | job summary report
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | --------------------------------------------------
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | PanDA job id: 6963375874
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | task id: 47962010
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | errors: (none)
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | pilot state: finished 
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | transexitcode: 0
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | exeerrorcode: 0
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | exeerrordiag: 
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | exitcode: 0
[2026-01-11 03:45:17] 2026-01-11 02:44:13,483 | INFO     | exitmsg: OK
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | cpuconsumptiontime: 320063 s
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | nevents: 900
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | neventsw: 0
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | pid: 432
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | pgrp: 432
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | corecount: 8
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | event service: False
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | sizes: {0: 2284395, 1: 2284650, 12: 2284650, 23: 2284678, 34: 2284706, 44: 2284734, 55: 2284890, 66: 2284918, 76: 2284946, 87: 2285002, 98: 2285030, 108: 2285600, 
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | --------------------------------------------------
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | 
[2026-01-11 03:45:17] 2026-01-11 02:44:13,484 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:45:17] 2026-01-11 02:44:14,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:45:17] 2026-01-11 02:44:14,175 | INFO     | job 6963375874 has completed (purged errors)
[2026-01-11 03:45:17] 2026-01-11 02:44:14,175 | INFO     | overall cleanup function is called
[2026-01-11 03:45:17] 2026-01-11 02:44:15,196 | INFO     | --- collectZombieJob: --- 10, [432]
[2026-01-11 03:45:17] 2026-01-11 02:44:15,196 | INFO     | zombie collector waiting for pid 432
[2026-01-11 03:45:17] 2026-01-11 02:44:15,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:45:17] 2026-01-11 02:44:15,197 | INFO     | collected zombie processes
[2026-01-11 03:45:17] 2026-01-11 02:44:15,197 | INFO     | will attempt to kill all subprocesses of pid=432
[2026-01-11 03:45:17] 2026-01-11 02:44:15,263 | INFO     | process IDs to be killed: [432] (in reverse order)
[2026-01-11 03:45:17] 2026-01-11 02:44:16,434 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:45:17] 2026-01-11 02:44:16,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:45:17] 2026-01-11 02:44:16,436 | INFO     | did not find any defunct processes belonging to 432
[2026-01-11 03:45:17] 2026-01-11 02:44:16,437 | INFO     | did not find any defunct processes belonging to 432
[2026-01-11 03:45:17] 2026-01-11 02:44:16,438 | INFO     | ready for new job
[2026-01-11 03:45:17] 2026-01-11 02:44:16,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:45:17] 2026-01-11 02:44:16,442 | INFO     | ***************************************
[2026-01-11 03:45:17] 2026-01-11 02:44:16,443 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:45:17] 2026-01-11 02:44:16,443 | INFO     | ***************************************
[2026-01-11 03:45:17] 2026-01-11 02:44:16,443 | INFO     | 
[2026-01-11 03:45:17] 2026-01-11 02:44:16,443 | INFO     | pilot is running in a VM
[2026-01-11 03:45:17] 2026-01-11 02:44:16,444 | INFO     | architecture information:
[2026-01-11 03:45:17] 2026-01-11 02:44:16,461 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:45:17] 2026-01-11 02:44:16,771 | INFO     | cat /etc/os-release:
[2026-01-11 03:45:17] NAME="CentOS Linux"
[2026-01-11 03:45:17] VERSION="7 (Core)"
[2026-01-11 03:45:17] ID="centos"
[2026-01-11 03:45:17] ID_LIKE="rhel fedora"
[2026-01-11 03:45:17] VERSION_ID="7"
[2026-01-11 03:45:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:45:17] ANSI_COLOR="0;31"
[2026-01-11 03:45:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:45:17] HOME_URL="https://www.centos.org/"
[2026-01-11 03:45:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:45:17] 
[2026-01-11 03:45:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:45:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:45:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:45:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:45:17] 
[2026-01-11 03:45:17] 2026-01-11 02:44:16,771 | INFO     | ***************************************
[2026-01-11 03:45:17] 2026-01-11 02:44:17,274 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-11 03:45:17] 2026-01-11 02:44:17,479 | INFO     | sufficient remaining disk space (496631808000 B)
[2026-01-11 03:45:17] 2026-01-11 02:44:17,479 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:45:17] 2026-01-11 02:44:17,479 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:45:17] 2026-01-11 02:44:17,480 | INFO     | update_server=False
[2026-01-11 03:45:17] 2026-01-11 02:44:17,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:45:17] 2026-01-11 02:44:17,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:45:17] 2026-01-11 02:44:17,483 | INFO     | aborting loop
[2026-01-11 03:45:17] 2026-01-11 02:44:17,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:45:17] 2026-01-11 02:44:17,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:45:17] 2026-01-11 02:44:18,022 | INFO     | all data control threads have been joined
[2026-01-11 03:45:17] 2026-01-11 02:44:18,023 | INFO     | all payload control threads have been joined
[2026-01-11 03:45:17] 2026-01-11 02:44:18,215 | INFO     | all job control threads have been joined
[2026-01-11 03:45:17] 2026-01-11 02:44:18,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:45:17] 2026-01-11 02:44:18,485 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:18,489 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:18,517 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:18,536 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:18,566 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,028 | INFO     | [data] control thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,029 | INFO     | [payload] control thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,221 | INFO     | [job] control thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,357 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,367 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,451 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,478 | INFO     | [job] validate thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,494 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,499 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:19,960 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:21,492 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:45:17] 2026-01-11 02:44:45,627 | INFO     | PID=26336 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 03:45:17] 2026-01-11 02:44:45,627 | INFO     | .. there are 2 such processes running
[2026-01-11 03:45:17] 2026-01-11 02:44:45,628 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:45:17] 2026-01-11 02:44:45,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:45:17] 2026-01-11 02:44:45,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:45:17] 2026-01-11 02:45:07,179 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:45:17] 2026-01-11 02:45:07,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353712113472)>', '<ExcThread(monitor, started 140353273321216)>']
[2026-01-11 03:45:17] 2026-01-11 02:45:07,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:45:17] 2026-01-11 02:45:07,759 | INFO     | [monitor] control thread has ended
[2026-01-11 03:45:17] 2026-01-11 02:45:12,299 | INFO     | all workflow threads have been joined
[2026-01-11 03:45:17] 2026-01-11 02:45:12,300 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:45:17] 2026-01-11 02:45:12,300 | INFO     | traces error code: 0
[2026-01-11 03:45:17] 2026-01-11 02:45:12,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:45:17] 2026-01-11 02:45:12,732 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:45:17] 2026-01-11 02:45:12,826 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:45:17] 2026-01-11 02:45:12,932 [wrapper] pilotpid: 26336
[2026-01-11 03:45:17] 2026-01-11 02:45:13,041 [wrapper] Pilot exit status: 0
[2026-01-11 03:45:17] 2026-01-11 02:45:13,436 [wrapper] pandaids: 6963375874
[2026-01-11 03:45:17] 2026-01-11 02:45:14,265 [wrapper] cleanup supervisor_pilot 16793 26337
[2026-01-11 03:45:17] 2026-01-11 02:45:14,369 [wrapper] Test setup, not cleaning
[2026-01-11 03:45:17] 2026-01-11 02:45:14,464 [wrapper] apfmon messages muted
[2026-01-11 03:45:17] 2026-01-11 02:45:14,517 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:45:17] 2026-01-11 02:45:14,580 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:45:17]  *** Error codes and diagnostics ***
[2026-01-11 03:45:17]     "exeErrorCode": 0,
[2026-01-11 03:45:17]     "exeErrorDiag": "",
[2026-01-11 03:45:17]     "pilotErrorCode": 0,
[2026-01-11 03:45:17]     "pilotErrorDiag": "",
[2026-01-11 03:45:17]  *** Listing of results directory ***
[2026-01-11 03:45:17] total 1177136
[2026-01-11 03:45:17] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc       100 Jan 10 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:45:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 05:02 run_atlas
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc       105 Jan 10 05:02 job.xml
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc      6391 Jan 10 05:02 init_data.xml
[2026-01-11 03:45:17] -rw-r--r--. 2 boinc boinc 392783492 Jan 10 05:02 EVNT.47962006._000082.pool.root.1
[2026-01-11 03:45:17] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:02 start_atlas.sh
[2026-01-11 03:45:17] drwxrwx--x. 2 boinc boinc        68 Jan 10 05:02 shared
[2026-01-11 03:45:17] -rw-r--r--. 2 boinc boinc    592611 Jan 10 05:02 input.tar.gz
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc         0 Jan 10 05:02 boinc_lockfile
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc      2892 Jan 10 05:03 pandaJob.out
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc    989374 Jan 10 05:06 agis_schedconf.cvmfs.json
[2026-01-11 03:45:17] drwx------. 5 boinc boinc      4096 Jan 10 05:06 pilot3
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc       533 Jan 11 03:12 boinc_task_state.xml
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc 782071617 Jan 11 03:40 HITS.47962010._001035.pool.root.1
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc      1032 Jan 11 03:42 memory_monitor_summary.json
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc   1516240 Jan 11 03:42 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc   2405200 Jan 11 03:42 log.47962010._001035.job.log.tgz.1
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc      7940 Jan 11 03:44 heartbeat.json
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc        95 Jan 11 03:44 pilot_heartbeat.json
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc      4884 Jan 11 03:45 pilotlog.txt
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc  10909410 Jan 11 03:45 log.47962010._001035.job.log.1
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc       353 Jan 11 03:45 output.list
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc       620 Jan 11 03:45 runtime_log
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc  13332480 Jan 11 03:45 result.tar.gz
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc      8817 Jan 11 03:45 runtime_log.err
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc       662 Jan 11 03:45 aHBMDmFvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjbmKDmg0aiFm.diag
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc      8192 Jan 11 03:45 boinc_mmap_file
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc        29 Jan 11 03:45 wrapper_checkpoint.txt
[2026-01-11 03:45:17] -rw-r--r--. 1 boinc boinc     21399 Jan 11 03:45 stderr.txt
[2026-01-11 03:45:17] HITS file was successfully produced:
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc 782071617 Jan 11 03:40 shared/HITS.pool.root.1
[2026-01-11 03:45:17]  *** Contents of shared directory: ***
[2026-01-11 03:45:17] total 1160940
[2026-01-11 03:45:17] -rw-r--r--. 2 boinc boinc 392783492 Jan 10 05:02 ATLAS.root_0
[2026-01-11 03:45:17] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:02 start_atlas.sh
[2026-01-11 03:45:17] -rw-r--r--. 2 boinc boinc    592611 Jan 10 05:02 input.tar.gz
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc 782071617 Jan 11 03:40 HITS.pool.root.1
[2026-01-11 03:45:17] -rw-------. 1 boinc boinc  13332480 Jan 11 03:45 result.tar.gz
03:45:19 (22596): run_atlas exited; CPU time 320456.783857
03:45:19 (22596): called boinc_finish(0)

</stderr_txt>
]]>

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