Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:42:36 (24278): wrapper (7.7.26015): starting
05:42:36 (24278): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 05:42:36] Arguments: --nthreads 8
[2026-01-10 05:42:36] Threads: 8
[2026-01-10 05:42:36] Checking for CVMFS
[2026-01-10 05:42:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:42:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:42:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:42:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:42:39] 2.11.2.0 4684 36390 119760 154968 1 62 19084799 25165825 899 130560 0 17037864 99.812 10685177 3924 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 05:42:39] CVMFS is ok
[2026-01-10 05:42:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:42:39] Checking for apptainer binary...
[2026-01-10 05:42:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:42:39] Running /usr/bin/apptainer --version
[2026-01-10 05:42:39] apptainer version 1.3.2-1.el7
[2026-01-10 05:42:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:42:58] cg-vwn471.simple-grid.lan
[2026-01-10 05:42:58] apptainer works
[2026-01-10 05:42:58] Set ATHENA_PROC_NUMBER=8
[2026-01-10 05:42:58] Set ATHENA_CORE_NUMBER=8
[2026-01-10 05:42:58] Starting ATLAS job with PandaID=6963379521
[2026-01-10 05:42:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:27:45]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:27:45] 2026-01-11 05:27:07,085 | INFO     | this job has now completed (state=finished)
[2026-01-11 06:27:45] 2026-01-11 05:27:07,085 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 06:27:45] 2026-01-11 05:27:07,085 | INFO     | log transfer has been attempted: DONE
[2026-01-11 06:27:45] 2026-01-11 05:27:07,085 | INFO     | job 6963379521 has finished - writing final server update
[2026-01-11 06:27:45] 2026-01-11 05:27:07,085 | INFO     | total number of processed events: 900 (read)
[2026-01-11 06:27:45] 2026-01-11 05:27:07,087 | INFO     | executing command: lscpu
[2026-01-11 06:27:45] 2026-01-11 05:27:07,109 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 06:27:45] 2026-01-11 05:27:07,318 | INFO     | time since job start (88803s) is within the limit (349056.0s)
[2026-01-11 06:27:45] 2026-01-11 05:27:08,409 | INFO     | PID=28023 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 06:27:45] 2026-01-11 05:27:08,409 | INFO     | .. there are 2 such processes running
[2026-01-11 06:27:45] 2026-01-11 05:27:08,545 | INFO     | monitor loop #5974: job 0:6963379521 is in state 'finished'
[2026-01-11 06:27:45] 2026-01-11 05:27:08,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:27:45] 2026-01-11 05:27:09,410 | INFO     | time since job start (88805s) is within the limit (349056.0s)
[2026-01-11 06:27:45] 2026-01-11 05:27:11,048 | INFO     | monitor loop #5975: job 0:6963379521 is in state 'finished'
[2026-01-11 06:27:45] 2026-01-11 05:27:11,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:27:45] 2026-01-11 05:27:11,415 | INFO     | time since job start (88807s) is within the limit (349056.0s)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,564 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 06:27:45] 2026-01-11 05:27:12,565 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-11 06:27:45] 2026-01-11 05:27:12,567 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963379521/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,568 | INFO     | extracted standard info from prmon json
[2026-01-11 06:27:45] 2026-01-11 05:27:12,568 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:27:45] 2026-01-11 05:27:12,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:27:45] 2026-01-11 05:27:12,593 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:27:45] 2026-01-11 05:27:12,595 | INFO     | sum of square deviations: 939473316125.4583
[2026-01-11 06:27:45] 2026-01-11 05:27:12,651 | INFO     | sum of deviations: 3633441225657.8735
[2026-01-11 06:27:45] 2026-01-11 05:27:12,651 | INFO     | mean x: 1768065093.0193503
[2026-01-11 06:27:45] 2026-01-11 05:27:12,651 | INFO     | mean y: 2792197.325501037
[2026-01-11 06:27:45] 2026-01-11 05:27:12,652 | INFO     | intersect: -6835252575.587709
[2026-01-11 06:27:45] 2026-01-11 05:27:12,653 | INFO     | chi2: 35.9665479660833
[2026-01-11 06:27:45] 2026-01-11 05:27:12,655 | INFO     | sum of square deviations: 929768551467.7454
[2026-01-11 06:27:45] 2026-01-11 05:27:12,708 | INFO     | sum of deviations: 4123854409381.691
[2026-01-11 06:27:45] 2026-01-11 05:27:12,709 | INFO     | mean x: 1768064940.5228848
[2026-01-11 06:27:45] 2026-01-11 05:27:12,709 | INFO     | mean y: 2799903.4486823855
[2026-01-11 06:27:45] 2026-01-11 05:27:12,709 | INFO     | intersect: -7839197322.138719
[2026-01-11 06:27:45] 2026-01-11 05:27:12,711 | INFO     | chi2: 32.45728510525433
[2026-01-11 06:27:45] 2026-01-11 05:27:12,711 | INFO     | current chi2=32.45728510525433 (change=9.75701883911191 %)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,711 | INFO     | right removable region: 1441
[2026-01-11 06:27:45] 2026-01-11 05:27:12,713 | INFO     | sum of square deviations: 929767651717.7452
[2026-01-11 06:27:45] 2026-01-11 05:27:12,765 | INFO     | sum of deviations: 3019888870579.064
[2026-01-11 06:27:45] 2026-01-11 05:27:12,766 | INFO     | mean x: 1768065245.5228848
[2026-01-11 06:27:45] 2026-01-11 05:27:12,766 | INFO     | mean y: 2801837.937586685
[2026-01-11 06:27:45] 2026-01-11 05:27:12,766 | INFO     | intersect: -5739880807.073491
[2026-01-11 06:27:45] 2026-01-11 05:27:12,767 | INFO     | chi2: 30.86906892047125
[2026-01-11 06:27:45] 2026-01-11 05:27:12,768 | INFO     | current chi2=30.86906892047125 (change=14.172833741005686 %)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,768 | INFO     | left removable region: 10
[2026-01-11 06:27:45] 2026-01-11 05:27:12,769 | INFO     | sum of square deviations: 908652032280.6462
[2026-01-11 06:27:45] 2026-01-11 05:27:12,825 | INFO     | sum of deviations: 3057608660194.9766
[2026-01-11 06:27:45] 2026-01-11 05:27:12,826 | INFO     | mean x: 1768065215.0307477
[2026-01-11 06:27:45] 2026-01-11 05:27:12,826 | INFO     | mean y: 2820358.9098532493
[2026-01-11 06:27:45] 2026-01-11 05:27:12,826 | INFO     | intersect: -5946708526.9704075
[2026-01-11 06:27:45] 2026-01-11 05:27:12,828 | INFO     | chi2: 22.234528158923855
[2026-01-11 06:27:45] 2026-01-11 05:27:12,828 | INFO     | current memory leak: 3.36 B/s (using 1431 data points, chi2=22.23)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | could have reported an average CPU frequency of 2249 MHz (48 samples)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | ..............................
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . Timing measurements:
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . get job = 0 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . initial setup = 9 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . payload setup = 186 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . stage-in = 0 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . payload execution = 88399 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,830 | INFO     | . stage-out = 2 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,831 | INFO     | . log creation = 0 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,831 | INFO     | ..............................
[2026-01-11 06:27:45] 2026-01-11 05:27:12,937 | INFO     | 
[2026-01-11 06:27:45] 2026-01-11 05:27:12,937 | INFO     | job summary report
[2026-01-11 06:27:45] 2026-01-11 05:27:12,937 | INFO     | --------------------------------------------------
[2026-01-11 06:27:45] 2026-01-11 05:27:12,937 | INFO     | PanDA job id: 6963379521
[2026-01-11 06:27:45] 2026-01-11 05:27:12,937 | INFO     | task id: 47962010
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | errors: (none)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | pilot state: finished 
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | transexitcode: 0
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | exeerrorcode: 0
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | exeerrordiag: 
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | exitcode: 0
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | exitmsg: OK
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | cpuconsumptiontime: 328962 s
[2026-01-11 06:27:45] 2026-01-11 05:27:12,938 | INFO     | nevents: 900
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | neventsw: 0
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | pid: 2093
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | pgrp: 2093
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | corecount: 8
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | event service: False
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | sizes: {0: 2283794, 1: 2284651, 2: 2284651, 12: 2284679, 23: 2284707, 34: 2284735, 44: 2284891, 55: 2284919, 66: 2284947, 77: 2284975, 87: 2285031, 98: 2285339, 10
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | --------------------------------------------------
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | 
[2026-01-11 06:27:45] 2026-01-11 05:27:12,939 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-11 06:27:45] 2026-01-11 05:27:12,963 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,966 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,966 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,966 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,966 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,966 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:27:45] 2026-01-11 05:27:12,966 | INFO     | job 6963379521 has completed (purged errors)
[2026-01-11 06:27:45] 2026-01-11 05:27:12,967 | INFO     | overall cleanup function is called
[2026-01-11 06:27:45] 2026-01-11 05:27:13,982 | INFO     | --- collectZombieJob: --- 10, [2093]
[2026-01-11 06:27:45] 2026-01-11 05:27:13,983 | INFO     | zombie collector waiting for pid 2093
[2026-01-11 06:27:45] 2026-01-11 05:27:13,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:27:45] 2026-01-11 05:27:13,983 | INFO     | collected zombie processes
[2026-01-11 06:27:45] 2026-01-11 05:27:13,983 | INFO     | will attempt to kill all subprocesses of pid=2093
[2026-01-11 06:27:45] 2026-01-11 05:27:14,048 | INFO     | process IDs to be killed: [2093] (in reverse order)
[2026-01-11 06:27:45] 2026-01-11 05:27:14,091 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:27:45] 2026-01-11 05:27:14,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:27:45] 2026-01-11 05:27:14,094 | INFO     | did not find any defunct processes belonging to 2093
[2026-01-11 06:27:45] 2026-01-11 05:27:14,096 | INFO     | did not find any defunct processes belonging to 2093
[2026-01-11 06:27:45] 2026-01-11 05:27:14,096 | INFO     | ready for new job
[2026-01-11 06:27:45] 2026-01-11 05:27:14,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:27:45] 2026-01-11 05:27:14,101 | INFO     | ***************************************
[2026-01-11 06:27:45] 2026-01-11 05:27:14,101 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:27:45] 2026-01-11 05:27:14,102 | INFO     | ***************************************
[2026-01-11 06:27:45] 2026-01-11 05:27:14,102 | INFO     | 
[2026-01-11 06:27:45] 2026-01-11 05:27:14,102 | INFO     | pilot is running in a VM
[2026-01-11 06:27:45] 2026-01-11 05:27:14,102 | INFO     | architecture information:
[2026-01-11 06:27:45] 2026-01-11 05:27:14,103 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:27:45] 2026-01-11 05:27:14,121 | INFO     | cat /etc/os-release:
[2026-01-11 06:27:45] NAME="CentOS Linux"
[2026-01-11 06:27:45] VERSION="7 (Core)"
[2026-01-11 06:27:45] ID="centos"
[2026-01-11 06:27:45] ID_LIKE="rhel fedora"
[2026-01-11 06:27:45] VERSION_ID="7"
[2026-01-11 06:27:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:27:45] ANSI_COLOR="0;31"
[2026-01-11 06:27:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:27:45] HOME_URL="https://www.centos.org/"
[2026-01-11 06:27:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:27:45] 
[2026-01-11 06:27:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:27:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:27:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:27:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:27:45] 
[2026-01-11 06:27:45] 2026-01-11 05:27:14,121 | INFO     | ***************************************
[2026-01-11 06:27:45] 2026-01-11 05:27:14,624 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-11 06:27:45] 2026-01-11 05:27:14,647 | INFO     | sufficient remaining disk space (495886270464 B)
[2026-01-11 06:27:45] 2026-01-11 05:27:14,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:27:45] 2026-01-11 05:27:14,647 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:27:45] 2026-01-11 05:27:14,648 | INFO     | update_server=False
[2026-01-11 06:27:45] 2026-01-11 05:27:14,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:27:45] 2026-01-11 05:27:14,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:27:45] 2026-01-11 05:27:14,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:27:45] 2026-01-11 05:27:14,649 | INFO     | aborting loop
[2026-01-11 06:27:45] 2026-01-11 05:27:14,674 | INFO     | all job control threads have been joined
[2026-01-11 06:27:45] 2026-01-11 05:27:14,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:27:45] 2026-01-11 05:27:14,895 | INFO     | all payload control threads have been joined
[2026-01-11 06:27:45] 2026-01-11 05:27:15,182 | INFO     | all data control threads have been joined
[2026-01-11 06:27:45] 2026-01-11 05:27:15,653 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,654 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,655 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,674 | INFO     | [job] validate thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,680 | INFO     | [job] control thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,793 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,901 | INFO     | [payload] control thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:15,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:27:45] 2026-01-11 05:27:16,019 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:16,188 | INFO     | [data] control thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:16,334 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:16,334 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:16,804 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:16,824 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:17,084 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:19,984 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:24,710 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:27:45] 2026-01-11 05:27:25,716 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:27:45] 2026-01-11 05:27:38,903 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:27:45] 2026-01-11 05:27:40,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253877921600)>', '<ExcThread(monitor, started 140253222397696)>']
[2026-01-11 06:27:45] 2026-01-11 05:27:44,507 | INFO     | PID=28023 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 06:27:45] 2026-01-11 05:27:44,507 | INFO     | .. there are 2 such processes running
[2026-01-11 06:27:45] 2026-01-11 05:27:44,508 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:27:45] 2026-01-11 05:27:44,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:27:45] 2026-01-11 05:27:44,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:27:45] 2026-01-11 05:27:44,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:27:45] 2026-01-11 05:27:44,509 | INFO     | [monitor] control thread has ended
[2026-01-11 06:27:45] 2026-01-11 05:27:45,326 | INFO     | all workflow threads have been joined
[2026-01-11 06:27:45] 2026-01-11 05:27:45,327 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:27:45] 2026-01-11 05:27:45,327 | INFO     | traces error code: 0
[2026-01-11 06:27:45] 2026-01-11 05:27:45,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:27:45] 2026-01-11 05:27:45,470 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:27:45] 2026-01-11 05:27:45,479 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:27:45] 2026-01-11 05:27:45,483 [wrapper] pilotpid: 28023
[2026-01-11 06:27:45] 2026-01-11 05:27:45,486 [wrapper] Pilot exit status: 0
[2026-01-11 06:27:45] 2026-01-11 05:27:45,502 [wrapper] pandaids: 6963379521
[2026-01-11 06:27:45] 2026-01-11 05:27:45,532 [wrapper] cleanup supervisor_pilot 12773 28024
[2026-01-11 06:27:45] 2026-01-11 05:27:45,539 [wrapper] Test setup, not cleaning
[2026-01-11 06:27:45] 2026-01-11 05:27:45,543 [wrapper] apfmon messages muted
[2026-01-11 06:27:45] 2026-01-11 05:27:45,547 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:27:45] 2026-01-11 05:27:45,550 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:27:45]  *** Error codes and diagnostics ***
[2026-01-11 06:27:45]     "exeErrorCode": 0,
[2026-01-11 06:27:45]     "exeErrorDiag": "",
[2026-01-11 06:27:45]     "pilotErrorCode": 0,
[2026-01-11 06:27:45]     "pilotErrorDiag": "",
[2026-01-11 06:27:45]  *** Listing of results directory ***
[2026-01-11 06:27:45] total 1198836
[2026-01-11 06:27:45] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc       100 Jan 10 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:27:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 05:42 run_atlas
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc       105 Jan 10 05:42 job.xml
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc      6391 Jan 10 05:42 init_data.xml
[2026-01-11 06:27:45] -rw-r--r--. 2 boinc boinc 396184497 Jan 10 05:42 EVNT.47962006._000013.pool.root.1
[2026-01-11 06:27:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:42 start_atlas.sh
[2026-01-11 06:27:45] drwxrwx--x. 2 boinc boinc        68 Jan 10 05:42 shared
[2026-01-11 06:27:45] -rw-r--r--. 2 boinc boinc    592611 Jan 10 05:42 input.tar.gz
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc         0 Jan 10 05:42 boinc_lockfile
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc      2892 Jan 10 05:42 pandaJob.out
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc    989374 Jan 10 05:46 agis_schedconf.cvmfs.json
[2026-01-11 06:27:45] drwx------. 5 boinc boinc      4096 Jan 10 05:47 pilot3
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc       533 Jan 11 05:55 boinc_task_state.xml
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc 798695475 Jan 11 06:26 HITS.47962010._001382.pool.root.1
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc      1032 Jan 11 06:26 memory_monitor_summary.json
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc   1516240 Jan 11 06:27 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc   2495407 Jan 11 06:27 log.47962010._001382.job.log.tgz.1
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc      8620 Jan 11 06:27 heartbeat.json
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc        29 Jan 11 06:27 wrapper_checkpoint.txt
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc      8192 Jan 11 06:27 boinc_mmap_file
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc        95 Jan 11 06:27 pilot_heartbeat.json
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc      4957 Jan 11 06:27 pilotlog.txt
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc  11914860 Jan 11 06:27 log.47962010._001382.job.log.1
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc       353 Jan 11 06:27 output.list
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc       620 Jan 11 06:27 runtime_log
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc  14428160 Jan 11 06:27 result.tar.gz
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc       662 Jan 11 06:27 xtaKDmRvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjQhKDmJtekYm.diag
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc      8833 Jan 11 06:27 runtime_log.err
[2026-01-11 06:27:45] -rw-r--r--. 1 boinc boinc     21347 Jan 11 06:27 stderr.txt
[2026-01-11 06:27:45] HITS file was successfully produced:
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc 798695475 Jan 11 06:26 shared/HITS.pool.root.1
[2026-01-11 06:27:45]  *** Contents of shared directory: ***
[2026-01-11 06:27:45] total 1181568
[2026-01-11 06:27:45] -rw-r--r--. 2 boinc boinc 396184497 Jan 10 05:42 ATLAS.root_0
[2026-01-11 06:27:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:42 start_atlas.sh
[2026-01-11 06:27:45] -rw-r--r--. 2 boinc boinc    592611 Jan 10 05:42 input.tar.gz
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc 798695475 Jan 11 06:26 HITS.pool.root.1
[2026-01-11 06:27:45] -rw-------. 1 boinc boinc  14428160 Jan 11 06:27 result.tar.gz
06:27:47 (24278): run_atlas exited; CPU time 329314.930705
06:27:47 (24278): called boinc_finish(0)

</stderr_txt>
]]>

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