Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:07:09 (436944): wrapper (7.7.26015): starting
17:07:09 (436944): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 17:07:09] Arguments: --nthreads 3
[2026-01-10 17:07:09] Threads: 3
[2026-01-10 17:07:09] Checking for CVMFS
[2026-01-10 17:07:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 17:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 17:07:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 17:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 17:07:10] 2.9.2.0 3779462 3925 87276 154984 2 81 22284024 36864001 0 130560 0 2232880 99.987 145258 3564 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 17:07:10] CVMFS is ok
[2026-01-10 17:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 17:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 17:07:10] Further information can be found at the LHC@home message board.
[2026-01-10 17:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 17:07:10] Checking for apptainer binary...
[2026-01-10 17:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 17:07:10] Running /usr/bin/apptainer --version
[2026-01-10 17:07:10] apptainer version 1.4.1-1.1
[2026-01-10 17:07:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 17:07:10] thA335b
[2026-01-10 17:07:10] apptainer works
[2026-01-10 17:07:10] Set ATHENA_PROC_NUMBER=3
[2026-01-10 17:07:10] Set ATHENA_CORE_NUMBER=3
[2026-01-10 17:07:10] Starting ATLAS job with PandaID=6963381574
[2026-01-10 17:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:33:57]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:33:57] 2026-01-11 00:32:55,587 | INFO     | all data control threads have been joined
[2026-01-11 01:33:57] 2026-01-11 00:32:55,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:33:57] 2026-01-11 00:32:55,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:33:57] 2026-01-11 00:32:55,986 | INFO     | aborting loop
[2026-01-11 01:33:57] 2026-01-11 00:32:56,508 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:56,509 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:56,513 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:56,593 | INFO     | [data] control thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:56,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:33:57] 2026-01-11 00:32:56,690 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:56,861 | INFO     | all job control threads have been joined
[2026-01-11 01:33:57] 2026-01-11 00:32:56,965 | INFO     | all payload control threads have been joined
[2026-01-11 01:33:57] 2026-01-11 00:32:56,992 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,389 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,663 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,707 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,721 | INFO     | [job] validate thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,730 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,867 | INFO     | [job] control thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,871 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:57,971 | INFO     | [payload] control thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:58,647 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:32:59,990 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:33:57] 2026-01-11 00:33:25,378 | INFO     | PID=440664 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 01:33:57] 2026-01-11 00:33:25,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:33:57] 2026-01-11 00:33:25,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:33:57] 2026-01-11 00:33:25,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:33:57] 2026-01-11 00:33:50,357 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:33:57] 2026-01-11 00:33:52,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893838329664)>', '<ExcThread(monitor, started 139892973623040)>']
[2026-01-11 01:33:57] 2026-01-11 00:33:52,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:33:57] 2026-01-11 00:33:52,517 | INFO     | [monitor] control thread has ended
[2026-01-11 01:33:57] 2026-01-11 00:33:57,338 | INFO     | all workflow threads have been joined
[2026-01-11 01:33:57] 2026-01-11 00:33:57,338 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:33:57] 2026-01-11 00:33:57,338 | INFO     | traces error code: 0
[2026-01-11 01:33:57] 2026-01-11 00:33:57,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:33:57] 2026-01-11 00:33:57,389 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:33:57] 2026-01-11 00:33:57,392 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:33:57] 2026-01-11 00:33:57,395 [wrapper] pilotpid: 440664
[2026-01-11 01:33:57] 2026-01-11 00:33:57,397 [wrapper] Pilot exit status: 0
[2026-01-11 01:33:57] 2026-01-11 00:33:57,405 [wrapper] pandaids: 6963381574
[2026-01-11 01:33:57] 2026-01-11 00:33:57,423 [wrapper] cleanup supervisor_pilot  498196 440665
[2026-01-11 01:33:57] 2026-01-11 00:33:57,426 [wrapper] Test setup, not cleaning
[2026-01-11 01:33:57] 2026-01-11 00:33:57,428 [wrapper] apfmon messages muted
[2026-01-11 01:33:57] 2026-01-11 00:33:57,431 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:33:57] 2026-01-11 00:33:57,433 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:33:57]  *** Error codes and diagnostics ***
[2026-01-11 01:33:57]     "exeErrorCode": 0,
[2026-01-11 01:33:57]     "exeErrorDiag": "",
[2026-01-11 01:33:57]     "pilotErrorCode": 0,
[2026-01-11 01:33:57]     "pilotErrorDiag": "",
[2026-01-11 01:33:57]  *** Listing of results directory ***
[2026-01-11 01:33:57] total 1168796
[2026-01-11 01:33:57] -rwx------ 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc       100 Jan 10 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:33:57] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 17:07 run_atlas
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc       105 Jan 10 17:07 job.xml
[2026-01-11 01:33:57] -rw-r--r-- 2 boinc boinc 392231449 Jan 10 17:07 EVNT.47962006._000115.pool.root.1
[2026-01-11 01:33:57] -rw-r--r-- 2 boinc boinc    592621 Jan 10 17:07 input.tar.gz
[2026-01-11 01:33:57] -rw-r--r-- 2 boinc boinc     15847 Jan 10 17:07 start_atlas.sh
[2026-01-11 01:33:57] drwxrwx--x 2 boinc boinc      4096 Jan 10 17:07 shared
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc         0 Jan 10 17:07 boinc_setup_complete
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc      6445 Jan 10 17:07 init_data.xml
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc         0 Jan 10 17:07 boinc_lockfile
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc      2893 Jan 10 17:07 pandaJob.out
[2026-01-11 01:33:57] -rw------- 1 boinc boinc    989556 Jan 10 17:07 agis_schedconf.cvmfs.json
[2026-01-11 01:33:57] drwx------ 5 boinc boinc      4096 Jan 10 17:07 pilot3
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc       531 Jan 11 01:29 boinc_task_state.xml
[2026-01-11 01:33:57] -rw------- 1 boinc boinc 789855016 Jan 11 01:32 HITS.47962010._001684.pool.root.1
[2026-01-11 01:33:57] -rw------- 1 boinc boinc      1020 Jan 11 01:32 memory_monitor_summary.json
[2026-01-11 01:33:57] -rw------- 1 boinc boinc        95 Jan 11 01:32 pilot_heartbeat.json
[2026-01-11 01:33:57] -rw------- 1 boinc boinc   1516240 Jan 11 01:32 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:33:57] -rw------- 1 boinc boinc   1169281 Jan 11 01:32 log.47962010._001684.job.log.tgz.1
[2026-01-11 01:33:57] -rw------- 1 boinc boinc      8548 Jan 11 01:32 heartbeat.json
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc      8192 Jan 11 01:33 boinc_mmap_file
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc        28 Jan 11 01:33 wrapper_checkpoint.txt
[2026-01-11 01:33:57] -rw------- 1 boinc boinc      4751 Jan 11 01:33 pilotlog.txt
[2026-01-11 01:33:57] -rw------- 1 boinc boinc   4263516 Jan 11 01:33 log.47962010._001684.job.log.1
[2026-01-11 01:33:57] -rw------- 1 boinc boinc       353 Jan 11 01:33 output.list
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc       620 Jan 11 01:33 runtime_log
[2026-01-11 01:33:57] -rw------- 1 boinc boinc   5447680 Jan 11 01:33 result.tar.gz
[2026-01-11 01:33:57] -rw------- 1 boinc boinc       666 Jan 11 01:33 zsTLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5cmKDmOhhpAo.diag
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc      8903 Jan 11 01:33 runtime_log.err
[2026-01-11 01:33:57] -rw-r--r-- 1 boinc boinc      7063 Jan 11 01:33 stderr.txt
[2026-01-11 01:33:57] HITS file was successfully produced:
[2026-01-11 01:33:57] -rw------- 1 boinc boinc 789855016 Jan 11 01:32 shared/HITS.pool.root.1
[2026-01-11 01:33:57]  *** Contents of shared directory: ***
[2026-01-11 01:33:57] total 1160308
[2026-01-11 01:33:57] -rw-r--r-- 2 boinc boinc 392231449 Jan 10 17:07 ATLAS.root_0
[2026-01-11 01:33:57] -rw-r--r-- 2 boinc boinc    592621 Jan 10 17:07 input.tar.gz
[2026-01-11 01:33:57] -rw-r--r-- 2 boinc boinc     15847 Jan 10 17:07 start_atlas.sh
[2026-01-11 01:33:57] -rw------- 1 boinc boinc 789855016 Jan 11 01:32 HITS.pool.root.1
[2026-01-11 01:33:57] -rw------- 1 boinc boinc   5447680 Jan 11 01:33 result.tar.gz
01:33:58 (436944): run_atlas exited; CPU time 89620.488378
01:33:58 (436944): called boinc_finish(0)

</stderr_txt>
]]>

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