Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:08 (4088008): wrapper (7.7.26015): starting
22:53:08 (4088008): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 22:53:08] Arguments: --nthreads 9
[2026-01-09 22:53:08] Threads: 9
[2026-01-09 22:53:08] Checking for CVMFS
[2026-01-09 22:53:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:53:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:53:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:53:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:53:09] 2.13.3.0 6634 23212 190564 154966 3 175 40774997 40960000 14679 16776704 0 25342798 99.730 18997940 46889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 22:53:09] CVMFS is ok
[2026-01-09 22:53:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:53:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 22:53:09] Further information can be found at the LHC@home message board.
[2026-01-09 22:53:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:53:09] Checking for apptainer binary...
[2026-01-09 22:53:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:53:09] Running /usr/bin/apptainer --version
[2026-01-09 22:53:09] apptainer version 1.4.5-2.el9
[2026-01-09 22:53:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:53:09] c-206-37.aglt2.org
[2026-01-09 22:53:09] apptainer works
[2026-01-09 22:53:10] Set ATHENA_PROC_NUMBER=9
[2026-01-09 22:53:10] Set ATHENA_CORE_NUMBER=9
[2026-01-09 22:53:10] Starting ATLAS job with PandaID=6963186563
[2026-01-09 22:53:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:16:58]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:16:58] 2026-01-10 10:15:45,279 | INFO     | time since job start (22893s) is within the limit (349056.0s)
[2026-01-10 05:16:58] 2026-01-10 10:15:46,734 | INFO     | monitor loop #1621: job 0:6963186563 is in state 'finished'
[2026-01-10 05:16:58] 2026-01-10 10:15:46,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:16:58] 2026-01-10 10:15:47,299 | INFO     | time since job start (22895s) is within the limit (349056.0s)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,244 | INFO     | monitor loop #1622: job 0:6963186563 is in state 'finished'
[2026-01-10 05:16:58] 2026-01-10 10:15:49,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,276 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 05:16:58] 2026-01-10 10:15:49,280 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.67003125
[2026-01-10 05:16:58] 2026-01-10 10:15:49,290 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963186563/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,290 | INFO     | extracted standard info from prmon json
[2026-01-10 05:16:58] 2026-01-10 10:15:49,290 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:16:58] 2026-01-10 10:15:49,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:16:58] 2026-01-10 10:15:49,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:16:58] 2026-01-10 10:15:49,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:16:58] 2026-01-10 10:15:49,295 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:16:58] 2026-01-10 10:15:49,296 | INFO     | sum of square deviations: 16089873423.31362
[2026-01-10 05:16:58] 2026-01-10 10:15:49,299 | INFO     | sum of deviations: 109883683246.94638
[2026-01-10 05:16:58] 2026-01-10 10:15:49,299 | INFO     | mean x: 1768028768.9571044
[2026-01-10 05:16:58] 2026-01-10 10:15:49,299 | INFO     | mean y: 2564384.2466487936
[2026-01-10 05:16:58] 2026-01-10 10:15:49,299 | INFO     | intersect: -12071956533.865126
[2026-01-10 05:16:58] 2026-01-10 10:15:49,300 | INFO     | chi2: 3.5296279938353474
[2026-01-10 05:16:58] 2026-01-10 10:15:49,300 | INFO     | sum of square deviations: 15451495913.671228
[2026-01-10 05:16:58] 2026-01-10 10:15:49,303 | INFO     | sum of deviations: 131741205070.73654
[2026-01-10 05:16:58] 2026-01-10 10:15:49,303 | INFO     | mean x: 1768028616.4701087
[2026-01-10 05:16:58] 2026-01-10 10:15:49,303 | INFO     | mean y: 2569541.839673913
[2026-01-10 05:16:58] 2026-01-10 10:15:49,303 | INFO     | intersect: -15071842789.1524
[2026-01-10 05:16:58] 2026-01-10 10:15:49,304 | INFO     | chi2: 2.8493884064715873
[2026-01-10 05:16:58] 2026-01-10 10:15:49,304 | INFO     | current chi2=2.8493884064715873 (change=19.272274260965432 %)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,304 | INFO     | right removable region: 367
[2026-01-10 05:16:58] 2026-01-10 10:15:49,304 | INFO     | sum of square deviations: 15451278143.671227
[2026-01-10 05:16:58] 2026-01-10 10:15:49,307 | INFO     | sum of deviations: 10431531264.372284
[2026-01-10 05:16:58] 2026-01-10 10:15:49,307 | INFO     | mean x: 1768028921.4701087
[2026-01-10 05:16:58] 2026-01-10 10:15:49,308 | INFO     | mean y: 2588075.4429347827
[2026-01-10 05:16:58] 2026-01-10 10:15:49,308 | INFO     | intersect: -1191050974.9410052
[2026-01-10 05:16:58] 2026-01-10 10:15:49,308 | INFO     | chi2: 0.8707558505852231
[2026-01-10 05:16:58] 2026-01-10 10:15:49,308 | INFO     | current chi2=0.8707558505852231 (change=75.3300956331365 %)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,308 | INFO     | sum of square deviations: 14829799463.900766
[2026-01-10 05:16:58] 2026-01-10 10:15:49,311 | INFO     | sum of deviations: 473575132.6528969
[2026-01-10 05:16:58] 2026-01-10 10:15:49,311 | INFO     | mean x: 1768029073.9834712
[2026-01-10 05:16:58] 2026-01-10 10:15:49,311 | INFO     | mean y: 2590501.9421487604
[2026-01-10 05:16:58] 2026-01-10 10:15:49,311 | INFO     | intersect: -53869776.248670585
[2026-01-10 05:16:58] 2026-01-10 10:15:49,312 | INFO     | chi2: 0.8284693090816021
[2026-01-10 05:16:58] 2026-01-10 10:15:49,312 | INFO     | current chi2=0.8284693090816021 (change=4.856302886187993 %)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,312 | INFO     | left removable region: 20
[2026-01-10 05:16:58] 2026-01-10 10:15:49,312 | INFO     | sum of square deviations: 12953730177.896393
[2026-01-10 05:16:58] 2026-01-10 10:15:49,315 | INFO     | sum of deviations: 43751839628.582184
[2026-01-10 05:16:58] 2026-01-10 10:15:49,315 | INFO     | mean x: 1768029196.017291
[2026-01-10 05:16:58] 2026-01-10 10:15:49,315 | INFO     | mean y: 2590652.236311239
[2026-01-10 05:16:58] 2026-01-10 10:15:49,315 | INFO     | intersect: -5969012027.4916935
[2026-01-10 05:16:58] 2026-01-10 10:15:49,315 | INFO     | chi2: 0.00287969845249535
[2026-01-10 05:16:58] 2026-01-10 10:15:49,316 | INFO     | current memory leak: 3.38 B/s (using 347 data points, chi2=0.00)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,316 | INFO     | could have reported an average CPU frequency of 3291 MHz (16 samples)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,316 | INFO     | ..............................
[2026-01-10 05:16:58] 2026-01-10 10:15:49,316 | INFO     | . Timing measurements:
[2026-01-10 05:16:58] 2026-01-10 10:15:49,316 | INFO     | . get job = 1 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,316 | INFO     | . initial setup = 5 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,317 | INFO     | . payload setup = 60 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,317 | INFO     | . stage-in = 0 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,317 | INFO     | . payload execution = 22736 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,317 | INFO     | . stage-out = 2 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,317 | INFO     | . log creation = 0 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,317 | INFO     | ..............................
[2026-01-10 05:16:58] 2026-01-10 10:15:49,327 | INFO     | time since job start (22897s) is within the limit (349056.0s)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,389 | INFO     | 
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | job summary report
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | --------------------------------------------------
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | PanDA job id: 6963186563
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | task id: 47898826
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | errors: (none)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | pilot state: finished 
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | transexitcode: 0
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | exeerrorcode: 0
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | exeerrordiag: 
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | exitcode: 0
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | exitmsg: OK
[2026-01-10 05:16:58] 2026-01-10 10:15:49,390 | INFO     | cpuconsumptiontime: 45809 s
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | nevents: 400
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | neventsw: 0
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | pid: 4102014
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | pgrp: 4102014
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | corecount: 9
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | event service: False
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 3: 2284027, 14: 2284055, 24: 2284083, 35: 2284239, 38: 2284529, 46: 2284557, 22800: 2319323, 22803: 2328657, 22813: 232
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | --------------------------------------------------
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | 
[2026-01-10 05:16:58] 2026-01-10 10:15:49,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | job 6963186563 has completed (purged errors)
[2026-01-10 05:16:58] 2026-01-10 10:15:49,425 | INFO     | overall cleanup function is called
[2026-01-10 05:16:58] 2026-01-10 10:15:50,435 | INFO     | --- collectZombieJob: --- 10, [4102014]
[2026-01-10 05:16:58] 2026-01-10 10:15:50,435 | INFO     | zombie collector waiting for pid 4102014
[2026-01-10 05:16:58] 2026-01-10 10:15:50,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:16:58] 2026-01-10 10:15:50,435 | INFO     | collected zombie processes
[2026-01-10 05:16:58] 2026-01-10 10:15:50,435 | INFO     | will attempt to kill all subprocesses of pid=4102014
[2026-01-10 05:16:58] 2026-01-10 10:15:50,716 | INFO     | process IDs to be killed: [4102014] (in reverse order)
[2026-01-10 05:16:58] 2026-01-10 10:15:50,816 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:16:58] 2026-01-10 10:15:50,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:16:58] 2026-01-10 10:15:50,837 | INFO     | did not find any defunct processes belonging to 4102014
[2026-01-10 05:16:58] 2026-01-10 10:15:50,847 | INFO     | did not find any defunct processes belonging to 4102014
[2026-01-10 05:16:58] 2026-01-10 10:15:50,847 | INFO     | ready for new job
[2026-01-10 05:16:58] 2026-01-10 10:15:50,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:16:58] 2026-01-10 10:15:50,850 | INFO     | ***************************************
[2026-01-10 05:16:58] 2026-01-10 10:15:50,851 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:16:58] 2026-01-10 10:15:50,851 | INFO     | ***************************************
[2026-01-10 05:16:58] 2026-01-10 10:15:50,851 | INFO     | 
[2026-01-10 05:16:58] 2026-01-10 10:15:50,854 | INFO     | architecture information:
[2026-01-10 05:16:58] 2026-01-10 10:15:50,855 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:16:58] 2026-01-10 10:15:50,885 | INFO     | cat /etc/os-release:
[2026-01-10 05:16:58] NAME="CentOS Linux"
[2026-01-10 05:16:58] VERSION="7 (Core)"
[2026-01-10 05:16:58] ID="centos"
[2026-01-10 05:16:58] ID_LIKE="rhel fedora"
[2026-01-10 05:16:58] VERSION_ID="7"
[2026-01-10 05:16:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:16:58] ANSI_COLOR="0;31"
[2026-01-10 05:16:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:16:58] HOME_URL="https://www.centos.org/"
[2026-01-10 05:16:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:16:58] 
[2026-01-10 05:16:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:16:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:16:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:16:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:16:58] 
[2026-01-10 05:16:58] 2026-01-10 10:15:50,885 | INFO     | ***************************************
[2026-01-10 05:16:58] 2026-01-10 10:15:51,389 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 05:16:58] 2026-01-10 10:15:51,447 | INFO     | sufficient remaining disk space (84037074944 B)
[2026-01-10 05:16:58] 2026-01-10 10:15:51,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:16:58] 2026-01-10 10:15:51,447 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:16:58] 2026-01-10 10:15:51,447 | INFO     | update_server=False
[2026-01-10 05:16:58] 2026-01-10 10:15:51,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:16:58] 2026-01-10 10:15:51,493 | INFO     | all data control threads have been joined
[2026-01-10 05:16:58] 2026-01-10 10:15:51,749 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 05:16:58] 2026-01-10 10:15:51,749 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 05:16:58] 2026-01-10 10:15:51,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:16:58] 2026-01-10 10:15:51,749 | INFO     | will abort loop
[2026-01-10 05:16:58] 2026-01-10 10:15:51,785 | INFO     | all job control threads have been joined
[2026-01-10 05:16:58] 2026-01-10 10:15:52,454 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:16:58] 2026-01-10 10:15:52,470 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,508 | INFO     | [data] control thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,754 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,791 | INFO     | [job] control thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,839 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,867 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:52,891 | INFO     | all payload control threads have been joined
[2026-01-10 05:16:58] 2026-01-10 10:15:53,150 | INFO     | [job] validate thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:53,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:53,388 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:53,809 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:53,876 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:53,898 | INFO     | [payload] control thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:54,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:16:58] 2026-01-10 10:15:54,471 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:54,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:16:58] 2026-01-10 10:15:55,406 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:15:58,553 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:16:58] 2026-01-10 10:16:22,843 | INFO     | PID=4092149 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 05:16:58] 2026-01-10 10:16:22,843 | INFO     | .. there are 11 such processes running
[2026-01-10 05:16:58] 2026-01-10 10:16:22,844 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:16:58] 2026-01-10 10:16:22,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:16:58] 2026-01-10 10:16:22,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:16:58] 2026-01-10 10:16:50,933 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:16:58] 2026-01-10 10:16:51,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132260337472)>', '<ExcThread(monitor, started 140131979724544)>']
[2026-01-10 05:16:58] 2026-01-10 10:16:52,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:16:58] 2026-01-10 10:16:52,030 | INFO     | [monitor] control thread has ended
[2026-01-10 05:16:58] 2026-01-10 10:16:56,810 | INFO     | all workflow threads have been joined
[2026-01-10 05:16:58] 2026-01-10 10:16:56,810 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:16:58] 2026-01-10 10:16:56,810 | INFO     | traces error code: 0
[2026-01-10 05:16:58] 2026-01-10 10:16:56,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:16:58] 2026-01-10 10:16:57,101 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:16:58] 2026-01-10 10:16:57,104 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:16:58] 2026-01-10 10:16:57,116 [wrapper] pilotpid: 4092149
[2026-01-10 05:16:58] 2026-01-10 10:16:57,119 [wrapper] Pilot exit status: 0
[2026-01-10 05:16:58] 2026-01-10 10:16:57,164 [wrapper] pandaids: 6963186563
[2026-01-10 05:16:58] 2026-01-10 10:16:57,593 [wrapper] cleanup supervisor_pilot  576219 4092150
[2026-01-10 05:16:58] 2026-01-10 10:16:57,599 [wrapper] Test setup, not cleaning
[2026-01-10 05:16:58] 2026-01-10 10:16:57,609 [wrapper] apfmon messages muted
[2026-01-10 05:16:58] 2026-01-10 10:16:57,623 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:16:58] 2026-01-10 10:16:57,707 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:16:58]  *** Error codes and diagnostics ***
[2026-01-10 05:16:58]     "exeErrorCode": 0,
[2026-01-10 05:16:58]     "exeErrorDiag": "",
[2026-01-10 05:16:58]     "pilotErrorCode": 0,
[2026-01-10 05:16:58]     "pilotErrorDiag": "",
[2026-01-10 05:16:58]  *** Listing of results directory ***
[2026-01-10 05:16:58] total 445460
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-10 05:16:58] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas       100 Jan  9 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:16:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 22:53 run_atlas
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas       105 Jan  9 22:53 job.xml
[2026-01-10 05:16:58] -rw-r--r--. 2 boincer umatlas 226805407 Jan  9 22:53 EVNT.47898824._001400.pool.root.1
[2026-01-10 05:16:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 22:53 start_atlas.sh
[2026-01-10 05:16:58] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 22:53 shared
[2026-01-10 05:16:58] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 22:53 input.tar.gz
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas         0 Jan  9 22:53 boinc_lockfile
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 22:53 pandaJob.out
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas        57 Jan  9 22:53 setup.sh.local
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas    989374 Jan  9 22:54 agis_schedconf.cvmfs.json
[2026-01-10 05:16:58] drwx------. 5 boincer umatlas      4096 Jan  9 22:54 pilot3
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas      6905 Jan 10 05:10 init_data.xml
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas 217976638 Jan 10 05:14 HITS.47898826._036539.pool.root.1
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas       531 Jan 10 05:15 boinc_task_state.xml
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas      1035 Jan 10 05:15 memory_monitor_summary.json
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas   1516240 Jan 10 05:15 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas    603027 Jan 10 05:15 log.47898826._036539.job.log.tgz.1
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas      7778 Jan 10 05:15 heartbeat.json
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas        95 Jan 10 05:16 pilot_heartbeat.json
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 05:16 boinc_mmap_file
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas        28 Jan 10 05:16 wrapper_checkpoint.txt
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas      5010 Jan 10 05:16 pilotlog.txt
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas   3129939 Jan 10 05:16 log.47898826._036539.job.log.1
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas       357 Jan 10 05:16 output.list
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas       620 Jan 10 05:16 runtime_log
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas   3747840 Jan 10 05:16 result.tar.gz
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 05:16 runtime_log.err
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas       656 Jan 10 05:16 5DyLDmZ3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH1lKDmOAYJzn.diag
[2026-01-10 05:16:58] -rw-r--r--. 1 boincer umatlas     15463 Jan 10 05:16 stderr.txt
[2026-01-10 05:16:58] HITS file was successfully produced:
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas 217976638 Jan 10 05:14 shared/HITS.pool.root.1
[2026-01-10 05:16:58]  *** Contents of shared directory: ***
[2026-01-10 05:16:58] total 438620
[2026-01-10 05:16:58] -rw-r--r--. 2 boincer umatlas 226805407 Jan  9 22:53 ATLAS.root_0
[2026-01-10 05:16:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 22:53 start_atlas.sh
[2026-01-10 05:16:58] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 22:53 input.tar.gz
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas 217976638 Jan 10 05:14 HITS.pool.root.1
[2026-01-10 05:16:58] -rw-------. 1 boincer umatlas   3747840 Jan 10 05:16 result.tar.gz
05:17:00 (4088008): run_atlas exited; CPU time 46141.410522
05:17:00 (4088008): called boinc_finish(0)

</stderr_txt>
]]>

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