Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:22:36 (3680665): wrapper (7.7.26015): starting
13:22:36 (3680665): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 13:22:36] Arguments: --nthreads 3
[2026-01-10 13:22:36] Threads: 3
[2026-01-10 13:22:36] Checking for CVMFS
[2026-01-10 13:22:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:22:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:22:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:22:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:22:36] 2.9.2.0 2849566 3369 85300 154980 2 56 21525585 36864001 0 130560 0 2166404 99.988 127748 3282 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 13:22:36] CVMFS is ok
[2026-01-10 13:22:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 13:22:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 13:22:36] Further information can be found at the LHC@home message board.
[2026-01-10 13:22:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:22:36] Checking for apptainer binary...
[2026-01-10 13:22:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:22:36] Running /usr/bin/apptainer --version
[2026-01-10 13:22:36] apptainer version 1.4.1-1.1
[2026-01-10 13:22:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:22:36] atlasA303a
[2026-01-10 13:22:36] apptainer works
[2026-01-10 13:22:36] Set ATHENA_PROC_NUMBER=3
[2026-01-10 13:22:36] Set ATHENA_CORE_NUMBER=3
[2026-01-10 13:22:36] Starting ATLAS job with PandaID=6963167653
[2026-01-10 13:22:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:21:18]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:21:18] 2026-01-10 14:20:49,075 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,137 | INFO     | [payload] control thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,188 | INFO     | [data] control thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,240 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,295 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:21:18] 2026-01-10 14:20:49,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:21:18] 2026-01-10 14:20:49,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:21:18] 2026-01-10 14:20:49,477 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,809 | INFO     | [job] validate thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,874 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,947 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:49,975 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:50,000 | INFO     | [job] control thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:50,418 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:51,416 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:53,437 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:20:58,690 | INFO     | job.realtimelogging is not enabled
[2026-01-10 15:21:18] 2026-01-10 14:20:59,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:21:18] 2026-01-10 14:21:00,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648534820672)>', '<ExcThread(monitor, started 139647892051712)>']
[2026-01-10 15:21:18] 2026-01-10 14:21:05,882 | INFO     | all workflow threads have been joined
[2026-01-10 15:21:18] 2026-01-10 14:21:05,883 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:21:18] 2026-01-10 14:21:05,883 | INFO     | traces error code: 0
[2026-01-10 15:21:18] 2026-01-10 14:21:05,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:21:18] 2026-01-10 14:21:18,409 | INFO     | PID=3684388 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:21:18] 2026-01-10 14:21:18,410 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:21:18] 2026-01-10 14:21:18,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:21:18] 2026-01-10 14:21:18,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:21:18] 2026-01-10 14:21:18,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:21:18] 2026-01-10 14:21:18,410 | INFO     | [monitor] control thread has ended
[2026-01-10 15:21:18] 2026-01-10 14:21:18,457 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:21:18] 2026-01-10 14:21:18,459 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:21:18] 2026-01-10 14:21:18,462 [wrapper] pilotpid: 3684388
[2026-01-10 15:21:18] 2026-01-10 14:21:18,464 [wrapper] Pilot exit status: 0
[2026-01-10 15:21:18] 2026-01-10 14:21:18,472 [wrapper] pandaids: 6963167653
[2026-01-10 15:21:18] 2026-01-10 14:21:18,489 [wrapper] cleanup supervisor_pilot 3705170 3684389
[2026-01-10 15:21:18] 2026-01-10 14:21:18,491 [wrapper] Test setup, not cleaning
[2026-01-10 15:21:18] 2026-01-10 14:21:18,494 [wrapper] apfmon messages muted
[2026-01-10 15:21:18] 2026-01-10 14:21:18,496 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:21:18] 2026-01-10 14:21:18,498 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:21:18]  *** Error codes and diagnostics ***
[2026-01-10 15:21:18]     "exeErrorCode": 0,
[2026-01-10 15:21:18]     "exeErrorDiag": "",
[2026-01-10 15:21:18]     "pilotErrorCode": 0,
[2026-01-10 15:21:18]     "pilotErrorDiag": "",
[2026-01-10 15:21:18]  *** Listing of results directory ***
[2026-01-10 15:21:18] total 451200
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 15:21:18] -rwx------ 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:59 queuedata.json
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc       100 Jan 10 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:21:18] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 13:22 run_atlas
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc       105 Jan 10 13:22 job.xml
[2026-01-10 15:21:18] -rw-r--r-- 2 boinc boinc 228076601 Jan 10 13:22 EVNT.47898824._001334.pool.root.1
[2026-01-10 15:21:18] -rw-r--r-- 2 boinc boinc    592393 Jan 10 13:22 input.tar.gz
[2026-01-10 15:21:18] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:22 start_atlas.sh
[2026-01-10 15:21:18] drwxrwx--x 2 boinc boinc      4096 Jan 10 13:22 shared
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:22 boinc_setup_complete
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc      6450 Jan 10 13:22 init_data.xml
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:22 boinc_lockfile
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc      2520 Jan 10 13:22 pandaJob.out
[2026-01-10 15:21:18] -rw------- 1 boinc boinc    989556 Jan 10 13:22 agis_schedconf.cvmfs.json
[2026-01-10 15:21:18] -rw------- 1 boinc boinc   1516240 Jan 10 13:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:21:18] drwx------ 5 boinc boinc      4096 Jan 10 13:22 pilot3
[2026-01-10 15:21:18] -rw------- 1 boinc boinc 227426968 Jan 10 15:20 HITS.47898826._035894.pool.root.1
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc       529 Jan 10 15:20 boinc_task_state.xml
[2026-01-10 15:21:18] -rw------- 1 boinc boinc      1017 Jan 10 15:20 memory_monitor_summary.json
[2026-01-10 15:21:18] -rw------- 1 boinc boinc    295272 Jan 10 15:20 log.47898826._035894.job.log.tgz.1
[2026-01-10 15:21:18] -rw------- 1 boinc boinc      7761 Jan 10 15:20 heartbeat.json
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc      8192 Jan 10 15:20 boinc_mmap_file
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc        27 Jan 10 15:20 wrapper_checkpoint.txt
[2026-01-10 15:21:18] -rw------- 1 boinc boinc       747 Jan 10 15:21 pilotlog.txt
[2026-01-10 15:21:18] -rw------- 1 boinc boinc        95 Jan 10 15:21 pilot_heartbeat.json
[2026-01-10 15:21:18] -rw------- 1 boinc boinc   1019931 Jan 10 15:21 log.47898826._035894.job.log.1
[2026-01-10 15:21:18] -rw------- 1 boinc boinc       357 Jan 10 15:21 output.list
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc       620 Jan 10 15:21 runtime_log
[2026-01-10 15:21:18] -rw------- 1 boinc boinc   1331200 Jan 10 15:21 result.tar.gz
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc      8917 Jan 10 15:21 runtime_log.err
[2026-01-10 15:21:18] -rw------- 1 boinc boinc       663 Jan 10 15:21 RpfMDmzzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsqlKDmxi8cHo.diag
[2026-01-10 15:21:18] -rw-r--r-- 1 boinc boinc      6466 Jan 10 15:21 stderr.txt
[2026-01-10 15:21:18] HITS file was successfully produced:
[2026-01-10 15:21:18] -rw------- 1 boinc boinc 227426968 Jan 10 15:20 shared/HITS.pool.root.1
[2026-01-10 15:21:18]  *** Contents of shared directory: ***
[2026-01-10 15:21:18] total 446736
[2026-01-10 15:21:18] -rw-r--r-- 2 boinc boinc 228076601 Jan 10 13:22 ATLAS.root_0
[2026-01-10 15:21:18] -rw-r--r-- 2 boinc boinc    592393 Jan 10 13:22 input.tar.gz
[2026-01-10 15:21:18] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:22 start_atlas.sh
[2026-01-10 15:21:18] -rw------- 1 boinc boinc 227426968 Jan 10 15:20 HITS.pool.root.1
[2026-01-10 15:21:18] -rw------- 1 boinc boinc   1331200 Jan 10 15:21 result.tar.gz
15:21:20 (3680665): run_atlas exited; CPU time 20608.979661
15:21:20 (3680665): called boinc_finish(0)

</stderr_txt>
]]>

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