Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:56 (3268177): wrapper (7.7.26015): starting
18:51:56 (3268177): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 18:51:56] Arguments: --nthreads 9
[2026-01-09 18:51:56] Threads: 9
[2026-01-09 18:51:56] Checking for CVMFS
[2026-01-09 18:51:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:51:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:51:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:52:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:52:17] 2.13.3.0 12468 94096 428712 154961 0 513 19282197 32947201 19619 16776704 0 334524781 99.425 498435593 34081 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:52:17] CVMFS is ok
[2026-01-09 18:52:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:52:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:52:17] Further information can be found at the LHC@home message board.
[2026-01-09 18:52:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:52:17] Checking for apptainer binary...
[2026-01-09 18:52:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:52:17] Running /usr/bin/apptainer --version
[2026-01-09 18:52:18] apptainer version 1.4.5-2.el9
[2026-01-09 18:52:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:52:18] c6-6-8-1.aglt2.org
[2026-01-09 18:52:18] apptainer works
[2026-01-09 18:52:18] Set ATHENA_PROC_NUMBER=9
[2026-01-09 18:52:18] Set ATHENA_CORE_NUMBER=9
[2026-01-09 18:52:18] Starting ATLAS job with PandaID=6963381681
[2026-01-09 18:52:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:18:50]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:18:50] 2026-01-10 22:17:53,427 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:18:50] 2026-01-10 22:17:53,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:18:50] 2026-01-10 22:17:53,452 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:18:50] 2026-01-10 22:17:53,454 | INFO     | sum of square deviations: 714854993483.4072
[2026-01-10 17:18:50] 2026-01-10 22:17:53,493 | INFO     | sum of deviations: 4747695708610.281
[2026-01-10 17:18:50] 2026-01-10 22:17:53,493 | INFO     | mean x: 1768043190.28539
[2026-01-10 17:18:50] 2026-01-10 22:17:53,493 | INFO     | mean y: 3017748.9992429977
[2026-01-10 17:18:50] 2026-01-10 22:17:53,493 | INFO     | intersect: -11739407139.511263
[2026-01-10 17:18:50] 2026-01-10 22:17:53,495 | INFO     | chi2: 10.356257437731655
[2026-01-10 17:18:50] 2026-01-10 22:17:53,497 | INFO     | sum of square deviations: 706769976597.1945
[2026-01-10 17:18:50] 2026-01-10 22:17:53,535 | INFO     | sum of deviations: 5187833241809.385
[2026-01-10 17:18:50] 2026-01-10 22:17:53,535 | INFO     | mean x: 1768043037.7940729
[2026-01-10 17:18:50] 2026-01-10 22:17:53,535 | INFO     | mean y: 3026047.510638298
[2026-01-10 17:18:50] 2026-01-10 22:17:53,535 | INFO     | intersect: -12974764107.892727
[2026-01-10 17:18:50] 2026-01-10 22:17:53,537 | INFO     | chi2: 7.4496142308542685
[2026-01-10 17:18:50] 2026-01-10 22:17:53,537 | INFO     | current chi2=7.4496142308542685 (change=28.06654068184338 %)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,539 | INFO     | sum of square deviations: 698746170160.7787
[2026-01-10 17:18:50] 2026-01-10 22:17:53,580 | INFO     | sum of deviations: 5402649667025.061
[2026-01-10 17:18:50] 2026-01-10 22:17:53,580 | INFO     | mean x: 1768042885.3028224
[2026-01-10 17:18:50] 2026-01-10 22:17:53,580 | INFO     | mean y: 3030129.0099160946
[2026-01-10 17:18:50] 2026-01-10 22:17:53,581 | INFO     | intersect: -13667336469.735685
[2026-01-10 17:18:50] 2026-01-10 22:17:53,582 | INFO     | chi2: 6.601121366746018
[2026-01-10 17:18:50] 2026-01-10 22:17:53,582 | INFO     | current chi2=6.601121366746018 (change=11.389755735189953 %)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,582 | INFO     | right removable region: 1310
[2026-01-10 17:18:50] 2026-01-10 22:17:53,584 | INFO     | sum of square deviations: 706768135007.1938
[2026-01-10 17:18:50] 2026-01-10 22:17:53,622 | INFO     | sum of deviations: 4212932972690.946
[2026-01-10 17:18:50] 2026-01-10 22:17:53,623 | INFO     | mean x: 1768043342.7940729
[2026-01-10 17:18:50] 2026-01-10 22:17:53,623 | INFO     | mean y: 3027832.7636778117
[2026-01-10 17:18:50] 2026-01-10 22:17:53,623 | INFO     | intersect: -10535998655.644793
[2026-01-10 17:18:50] 2026-01-10 22:17:53,625 | INFO     | chi2: 6.522161892963115
[2026-01-10 17:18:50] 2026-01-10 22:17:53,625 | INFO     | current chi2=6.522161892963115 (change=37.02201850254823 %)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,627 | INFO     | sum of square deviations: 698742486980.78
[2026-01-10 17:18:50] 2026-01-10 22:17:53,666 | INFO     | sum of deviations: 3841124711331.6533
[2026-01-10 17:18:50] 2026-01-10 22:17:53,666 | INFO     | mean x: 1768043495.3028224
[2026-01-10 17:18:50] 2026-01-10 22:17:53,666 | INFO     | mean y: 3034896.091533181
[2026-01-10 17:18:50] 2026-01-10 22:17:53,666 | INFO     | intersect: -9716247510.595245
[2026-01-10 17:18:50] 2026-01-10 22:17:53,668 | INFO     | chi2: 4.81462709168511
[2026-01-10 17:18:50] 2026-01-10 22:17:53,668 | INFO     | current chi2=4.81462709168511 (change=26.180503172119916 %)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,670 | INFO     | sum of square deviations: 690777976424.9071
[2026-01-10 17:18:50] 2026-01-10 22:17:53,707 | INFO     | sum of deviations: 3661181411809.5825
[2026-01-10 17:18:50] 2026-01-10 22:17:53,708 | INFO     | mean x: 1768043647.8101072
[2026-01-10 17:18:50] 2026-01-10 22:17:53,708 | INFO     | mean y: 3038338.1071975497
[2026-01-10 17:18:50] 2026-01-10 22:17:53,708 | INFO     | intersect: -9367741796.10001
[2026-01-10 17:18:50] 2026-01-10 22:17:53,710 | INFO     | chi2: 4.386031426359898
[2026-01-10 17:18:50] 2026-01-10 22:17:53,710 | INFO     | current chi2=4.386031426359898 (change=8.901949354819184 %)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,710 | INFO     | left removable region: 30
[2026-01-10 17:18:50] 2026-01-10 22:17:53,712 | INFO     | sum of square deviations: 650340973586.0618
[2026-01-10 17:18:50] 2026-01-10 22:17:53,747 | INFO     | sum of deviations: 4049534804820.48
[2026-01-10 17:18:50] 2026-01-10 22:17:53,748 | INFO     | mean x: 1768043769.8445313
[2026-01-10 17:18:50] 2026-01-10 22:17:53,748 | INFO     | mean y: 3057666.56015625
[2026-01-10 17:18:50] 2026-01-10 22:17:53,748 | INFO     | intersect: -11006174525.826021
[2026-01-10 17:18:50] 2026-01-10 22:17:53,750 | INFO     | chi2: 0.34180484061722577
[2026-01-10 17:18:50] 2026-01-10 22:17:53,750 | INFO     | current memory leak: 6.23 B/s (using 1280 data points, chi2=0.34)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,752 | INFO     | could have reported an average CPU frequency of 2666 MHz (48 samples)
[2026-01-10 17:18:50] 2026-01-10 22:17:53,752 | INFO     | ..............................
[2026-01-10 17:18:50] 2026-01-10 22:17:53,752 | INFO     | . Timing measurements:
[2026-01-10 17:18:50] 2026-01-10 22:17:53,752 | INFO     | . get job = 0 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | . initial setup = 5 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | . payload setup = 34 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | . stage-in = 0 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | . payload execution = 80559 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | . stage-out = 4 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | . log creation = 0 s
[2026-01-10 17:18:50] 2026-01-10 22:17:53,753 | INFO     | ..............................
[2026-01-10 17:18:50] 2026-01-10 22:17:54,075 | INFO     | 
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | job summary report
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | --------------------------------------------------
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | PanDA job id: 6963381681
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | task id: 47962010
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | errors: (none)
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | pilot state: finished 
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | transexitcode: 0
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | exeerrorcode: 0
[2026-01-10 17:18:50] 2026-01-10 22:17:54,076 | INFO     | exeerrordiag: 
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | exitcode: 0
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | exitmsg: OK
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | cpuconsumptiontime: 269620 s
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | nevents: 900
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | neventsw: 0
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | pid: 3296049
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | pgrp: 3296049
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | corecount: 9
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | event service: False
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | sizes: {0: 2284453, 1: 2284652, 2: 2284652, 13: 2284680, 24: 2284736, 27: 2285026, 35: 2285182, 80598: 2348108, 80603: 2357102, 80604: 2357158, 80609: 2357404}
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | --------------------------------------------------
[2026-01-10 17:18:50] 2026-01-10 22:17:54,077 | INFO     | 
[2026-01-10 17:18:50] 2026-01-10 22:17:54,078 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 17:18:50] 2026-01-10 22:17:54,089 | INFO     | time since job start (80670s) is within the limit (349056.0s)
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,100 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:18:50] 2026-01-10 22:17:54,101 | INFO     | job 6963381681 has completed (purged errors)
[2026-01-10 17:18:50] 2026-01-10 22:17:54,101 | INFO     | overall cleanup function is called
[2026-01-10 17:18:50] 2026-01-10 22:17:55,117 | INFO     | --- collectZombieJob: --- 10, [3296049]
[2026-01-10 17:18:50] 2026-01-10 22:17:55,117 | INFO     | zombie collector waiting for pid 3296049
[2026-01-10 17:18:50] 2026-01-10 22:17:55,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:18:50] 2026-01-10 22:17:55,118 | INFO     | collected zombie processes
[2026-01-10 17:18:50] 2026-01-10 22:17:55,118 | INFO     | will attempt to kill all subprocesses of pid=3296049
[2026-01-10 17:18:50] 2026-01-10 22:17:55,484 | INFO     | process IDs to be killed: [3296049] (in reverse order)
[2026-01-10 17:18:50] 2026-01-10 22:17:55,564 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:18:50] 2026-01-10 22:17:55,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:18:50] 2026-01-10 22:17:55,577 | INFO     | did not find any defunct processes belonging to 3296049
[2026-01-10 17:18:50] 2026-01-10 22:17:55,589 | INFO     | did not find any defunct processes belonging to 3296049
[2026-01-10 17:18:50] 2026-01-10 22:17:55,589 | INFO     | ready for new job
[2026-01-10 17:18:50] 2026-01-10 22:17:55,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:18:50] 2026-01-10 22:17:55,595 | INFO     | ***************************************
[2026-01-10 17:18:50] 2026-01-10 22:17:55,595 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:18:50] 2026-01-10 22:17:55,595 | INFO     | ***************************************
[2026-01-10 17:18:50] 2026-01-10 22:17:55,596 | INFO     | 
[2026-01-10 17:18:50] 2026-01-10 22:17:55,601 | INFO     | architecture information:
[2026-01-10 17:18:50] 2026-01-10 22:17:55,602 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:18:50] 2026-01-10 22:17:55,619 | INFO     | cat /etc/os-release:
[2026-01-10 17:18:50] NAME="CentOS Linux"
[2026-01-10 17:18:50] VERSION="7 (Core)"
[2026-01-10 17:18:50] ID="centos"
[2026-01-10 17:18:50] ID_LIKE="rhel fedora"
[2026-01-10 17:18:50] VERSION_ID="7"
[2026-01-10 17:18:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:18:50] ANSI_COLOR="0;31"
[2026-01-10 17:18:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:18:50] HOME_URL="https://www.centos.org/"
[2026-01-10 17:18:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:18:50] 
[2026-01-10 17:18:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:18:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:18:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:18:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:18:50] 
[2026-01-10 17:18:50] 2026-01-10 22:17:55,619 | INFO     | ***************************************
[2026-01-10 17:18:50] 2026-01-10 22:17:56,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 17:18:50] 2026-01-10 22:17:56,140 | INFO     | sufficient remaining disk space (75557240832 B)
[2026-01-10 17:18:50] 2026-01-10 22:17:56,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:18:50] 2026-01-10 22:17:56,140 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:18:50] 2026-01-10 22:17:56,140 | INFO     | update_server=False
[2026-01-10 17:18:50] 2026-01-10 22:17:56,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:18:50] 2026-01-10 22:17:56,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:18:50] 2026-01-10 22:17:56,183 | INFO     | all data control threads have been joined
[2026-01-10 17:18:50] 2026-01-10 22:17:56,273 | INFO     | all job control threads have been joined
[2026-01-10 17:18:50] 2026-01-10 22:17:56,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:18:50] 2026-01-10 22:17:56,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:18:50] 2026-01-10 22:17:56,675 | INFO     | aborting loop
[2026-01-10 17:18:50] 2026-01-10 22:17:57,145 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,173 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,189 | INFO     | [data] control thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,278 | INFO     | [job] control thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,282 | INFO     | all payload control threads have been joined
[2026-01-10 17:18:50] 2026-01-10 22:17:57,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,604 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,680 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:57,736 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,128 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,172 | INFO     | [job] validate thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,235 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,287 | INFO     | [payload] control thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,424 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,431 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:17:58,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:18:50] 2026-01-10 22:17:59,877 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:18:00,148 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:18:50] 2026-01-10 22:18:27,663 | INFO     | PID=3279742 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:18:50] 2026-01-10 22:18:27,664 | INFO     | .. there are 13 such processes running
[2026-01-10 17:18:50] 2026-01-10 22:18:27,665 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:18:50] 2026-01-10 22:18:27,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:18:50] 2026-01-10 22:18:27,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:18:50] 2026-01-10 22:18:44,587 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:18:50] 2026-01-10 22:18:45,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428756010816)>', '<ExcThread(monitor, started 140428049381120)>']
[2026-01-10 17:18:50] 2026-01-10 22:18:45,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:18:50] 2026-01-10 22:18:45,760 | INFO     | [monitor] control thread has ended
[2026-01-10 17:18:50] 2026-01-10 22:18:50,596 | INFO     | all workflow threads have been joined
[2026-01-10 17:18:50] 2026-01-10 22:18:50,596 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:18:50] 2026-01-10 22:18:50,597 | INFO     | traces error code: 0
[2026-01-10 17:18:50] 2026-01-10 22:18:50,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:18:50] 2026-01-10 22:18:50,753 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:18:50] 2026-01-10 22:18:50,757 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:18:50] 2026-01-10 22:18:50,760 [wrapper] pilotpid: 3279742
[2026-01-10 17:18:50] 2026-01-10 22:18:50,762 [wrapper] Pilot exit status: 0
[2026-01-10 17:18:50] 2026-01-10 22:18:50,772 [wrapper] pandaids: 6963381681
[2026-01-10 17:18:50] 2026-01-10 22:18:50,842 [wrapper] cleanup supervisor_pilot 2030666 3279743
[2026-01-10 17:18:50] 2026-01-10 22:18:50,845 [wrapper] Test setup, not cleaning
[2026-01-10 17:18:50] 2026-01-10 22:18:50,848 [wrapper] apfmon messages muted
[2026-01-10 17:18:50] 2026-01-10 22:18:50,850 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:18:50] 2026-01-10 22:18:50,853 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:18:50]  *** Error codes and diagnostics ***
[2026-01-10 17:18:50]     "exeErrorCode": 0,
[2026-01-10 17:18:50]     "exeErrorDiag": "",
[2026-01-10 17:18:50]     "pilotErrorCode": 0,
[2026-01-10 17:18:50]     "pilotErrorDiag": "",
[2026-01-10 17:18:50]  *** Listing of results directory ***
[2026-01-10 17:18:50] total 1181860
[2026-01-10 17:18:50] -rwx------ 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:18:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:51 run_atlas
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:51 job.xml
[2026-01-10 17:18:50] -rw-r--r-- 2 boincer umatlas 393052646 Jan  9 18:51 EVNT.47962006._000120.pool.root.1
[2026-01-10 17:18:50] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:51 start_atlas.sh
[2026-01-10 17:18:50] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:51 shared
[2026-01-10 17:18:50] -rw-r--r-- 2 boincer umatlas    592619 Jan  9 18:51 input.tar.gz
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:51 boinc_lockfile
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas      2893 Jan  9 18:52 pandaJob.out
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas        57 Jan  9 18:52 setup.sh.local
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas    989374 Jan  9 18:53 agis_schedconf.cvmfs.json
[2026-01-10 17:18:50] drwx------ 5 boincer umatlas      4096 Jan  9 18:53 pilot3
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas       533 Jan 10 17:04 boinc_task_state.xml
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas      6878 Jan 10 17:09 init_data.xml
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas 787480762 Jan 10 17:17 HITS.47962010._001741.pool.root.1
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas      1050 Jan 10 17:17 memory_monitor_summary.json
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas   1516240 Jan 10 17:17 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas   2464367 Jan 10 17:17 log.47962010._001741.job.log.tgz.1
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas      8623 Jan 10 17:17 heartbeat.json
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas        95 Jan 10 17:18 pilot_heartbeat.json
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 17:18 boinc_mmap_file
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas        29 Jan 10 17:18 wrapper_checkpoint.txt
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas      4824 Jan 10 17:18 pilotlog.txt
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas  10419825 Jan 10 17:18 log.47962010._001741.job.log.1
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas       353 Jan 10 17:18 output.list
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas       620 Jan 10 17:18 runtime_log
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas  12902400 Jan 10 17:18 result.tar.gz
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 17:18 runtime_log.err
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas       660 Jan 10 17:18 MKvLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTdmKDmybPeQo.diag
[2026-01-10 17:18:50] -rw-r--r-- 1 boincer umatlas     21062 Jan 10 17:18 stderr.txt
[2026-01-10 17:18:50] HITS file was successfully produced:
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas 787480762 Jan 10 17:17 shared/HITS.pool.root.1
[2026-01-10 17:18:50]  *** Contents of shared directory: ***
[2026-01-10 17:18:50] total 1166076
[2026-01-10 17:18:50] -rw-r--r-- 2 boincer umatlas 393052646 Jan  9 18:51 ATLAS.root_0
[2026-01-10 17:18:50] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:51 start_atlas.sh
[2026-01-10 17:18:50] -rw-r--r-- 2 boincer umatlas    592619 Jan  9 18:51 input.tar.gz
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas 787480762 Jan 10 17:17 HITS.pool.root.1
[2026-01-10 17:18:50] -rw------- 1 boincer umatlas  12902400 Jan 10 17:18 result.tar.gz
17:18:52 (3268177): run_atlas exited; CPU time 271844.543831
17:18:52 (3268177): called boinc_finish(0)

</stderr_txt>
]]>

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