Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:46:14 (7439): wrapper (7.7.26015): starting
02:46:14 (7439): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 02:46:14] Arguments: --nthreads 8
[2026-01-10 02:46:14] Threads: 8
[2026-01-10 02:46:14] Checking for CVMFS
[2026-01-10 02:46:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 02:46:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 02:46:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 02:46:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 02:46:14] 2.11.0.0 4201 52846 66276 154963 1 57 2874977 4096000 0 130560 1 2584603 99.254 3205080 505 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 02:46:14] CVMFS is ok
[2026-01-10 02:46:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 02:46:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 02:46:14] Further information can be found at the LHC@home message board.
[2026-01-10 02:46:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:46:14] Checking for apptainer binary...
[2026-01-10 02:46:14] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 02:46:14] apptainer is not installed, using version from CVMFS
[2026-01-10 02:46:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:46:14] WARNING: Environment variable TMPDIR already has value [/tmp/job_11010007/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment fat-node003
[2026-01-10 02:46:14] apptainer works
[2026-01-10 02:46:15] Set ATHENA_PROC_NUMBER=8
[2026-01-10 02:46:15] Set ATHENA_CORE_NUMBER=8
[2026-01-10 02:46:15] Starting ATLAS job with PandaID=6963381553
[2026-01-10 02:46:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11010007/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:30:01]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:30:01] 2026-01-10 06:29:28,498 | INFO     | time since job start (16989s) is within the limit (349056.0s)
[2026-01-10 07:30:01] 2026-01-10 06:29:28,595 | INFO     | monitor loop #1252: job 0:6963381553 is in state 'finished'
[2026-01-10 07:30:01] 2026-01-10 06:29:28,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,629 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 07:30:01] 2026-01-10 06:29:29,645 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2519.5062343749996
[2026-01-10 07:30:01] 2026-01-10 06:29:29,650 | INFO     | using path: /tmp/job_11010007/atlas/pilot/slots/0/PanDA_Pilot-6963381553/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,651 | INFO     | extracted standard info from prmon json
[2026-01-10 07:30:01] 2026-01-10 06:29:29,651 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:30:01] 2026-01-10 06:29:29,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:30:01] 2026-01-10 06:29:29,653 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:30:01] 2026-01-10 06:29:29,653 | INFO     | sum of square deviations: 6662039329.5
[2026-01-10 07:30:01] 2026-01-10 06:29:29,655 | INFO     | sum of deviations: 830138176526.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,655 | INFO     | mean x: 1768018080.5
[2026-01-10 07:30:01] 2026-01-10 06:29:29,655 | INFO     | mean y: 3285387.0935251797
[2026-01-10 07:30:01] 2026-01-10 06:29:29,655 | INFO     | intersect: -220304526203.29865
[2026-01-10 07:30:01] 2026-01-10 06:29:29,655 | INFO     | chi2: 6.7719221816117745
[2026-01-10 07:30:01] 2026-01-10 06:29:29,655 | INFO     | sum of square deviations: 6309000152.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,656 | INFO     | sum of deviations: 891121222673.9998
[2026-01-10 07:30:01] 2026-01-10 06:29:29,656 | INFO     | mean x: 1768017928.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,656 | INFO     | mean y: 3311551.604395604
[2026-01-10 07:30:01] 2026-01-10 06:29:29,656 | INFO     | intersect: -249722201168.41995
[2026-01-10 07:30:01] 2026-01-10 06:29:29,656 | INFO     | chi2: 5.029056517548769
[2026-01-10 07:30:01] 2026-01-10 06:29:29,656 | INFO     | current chi2=5.029056517548769 (change=25.73664636601286 %)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,657 | INFO     | sum of square deviations: 5968658887.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | sum of deviations: 836814077343.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | mean x: 1768017775.5
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | mean y: 3287215.1791044776
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | intersect: -247875204677.44293
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | chi2: 4.999577647344989
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | current chi2=4.999577647344989 (change=0.5861709865640696 %)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | right removable region: 267
[2026-01-10 07:30:01] 2026-01-10 06:29:29,658 | INFO     | sum of square deviations: 6309000152.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,659 | INFO     | sum of deviations: 708264929645.9993
[2026-01-10 07:30:01] 2026-01-10 06:29:29,659 | INFO     | mean x: 1768018233.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,659 | INFO     | mean y: 3337975.1391941393
[2026-01-10 07:30:01] 2026-01-10 06:29:29,659 | INFO     | intersect: -198479033120.0056
[2026-01-10 07:30:01] 2026-01-10 06:29:29,659 | INFO     | chi2: 3.0765562060348284
[2026-01-10 07:30:01] 2026-01-10 06:29:29,660 | INFO     | current chi2=3.0765562060348284 (change=54.56893739286026 %)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,660 | INFO     | sum of square deviations: 5968658887.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | sum of deviations: 662291696302.9999
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | mean x: 1768018385.5
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | mean y: 3358501.917910448
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | intersect: -196178718208.48904
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | chi2: 2.856792405421274
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | current chi2=2.856792405421274 (change=7.143175222428121 %)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | left removable region: 20
[2026-01-10 07:30:01] 2026-01-10 06:29:29,661 | INFO     | sum of square deviations: 4672638308.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,662 | INFO     | sum of deviations: 610018032453.9999
[2026-01-10 07:30:01] 2026-01-10 06:29:29,662 | INFO     | mean x: 1768018355.0
[2026-01-10 07:30:01] 2026-01-10 06:29:29,662 | INFO     | mean y: 3386718.3076923075
[2026-01-10 07:30:01] 2026-01-10 06:29:29,662 | INFO     | intersect: -230813339757.85114
[2026-01-10 07:30:01] 2026-01-10 06:29:29,662 | INFO     | chi2: 0.8591131905301004
[2026-01-10 07:30:01] 2026-01-10 06:29:29,662 | INFO     | current memory leak: 130.55 B/s (using 247 data points, chi2=0.86)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | could have reported an average CPU frequency of 2664 MHz (13 samples)
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | ..............................
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . Timing measurements:
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . get job = 0 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . initial setup = 1 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . payload setup = 37 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . stage-in = 0 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . payload execution = 16929 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . stage-out = 1 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | . log creation = 0 s
[2026-01-10 07:30:01] 2026-01-10 06:29:29,663 | INFO     | ..............................
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | 
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | job summary report
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | --------------------------------------------------
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | PanDA job id: 6963381553
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | task id: 47962010
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | errors: (none)
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | pilot state: finished 
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | transexitcode: 0
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | exeerrorcode: 0
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | exeerrordiag: 
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | exitcode: 0
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | exitmsg: OK
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | cpuconsumptiontime: 127446 s
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | nevents: 900
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | neventsw: 0
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | pid: 913
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | pgrp: 913
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | corecount: 8
[2026-01-10 07:30:01] 2026-01-10 06:29:30,011 | INFO     | event service: False
[2026-01-10 07:30:01] 2026-01-10 06:29:30,012 | INFO     | sizes: {0: 2284750, 2: 2285012, 11: 2285040, 16970: 2317847, 16972: 2326871, 16975: 2326927, 16977: 2327301}
[2026-01-10 07:30:01] 2026-01-10 06:29:30,012 | INFO     | --------------------------------------------------
[2026-01-10 07:30:01] 2026-01-10 06:29:30,012 | INFO     | 
[2026-01-10 07:30:01] 2026-01-10 06:29:30,012 | INFO     | executing command: ls -lF /tmp/job_11010007/atlas/pilot/slots/0
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | job 6963381553 has completed (purged errors)
[2026-01-10 07:30:01] 2026-01-10 06:29:30,022 | INFO     | overall cleanup function is called
[2026-01-10 07:30:01] 2026-01-10 06:29:31,029 | INFO     | --- collectZombieJob: --- 10, [913]
[2026-01-10 07:30:01] 2026-01-10 06:29:31,029 | INFO     | zombie collector waiting for pid 913
[2026-01-10 07:30:01] 2026-01-10 06:29:31,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:30:01] 2026-01-10 06:29:31,029 | INFO     | collected zombie processes
[2026-01-10 07:30:01] 2026-01-10 06:29:31,030 | INFO     | will attempt to kill all subprocesses of pid=913
[2026-01-10 07:30:01] 2026-01-10 06:29:31,127 | INFO     | process IDs to be killed: [913] (in reverse order)
[2026-01-10 07:30:01] 2026-01-10 06:29:31,159 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:30:01] 2026-01-10 06:29:31,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:30:01] 2026-01-10 06:29:31,163 | INFO     | did not find any defunct processes belonging to 913
[2026-01-10 07:30:01] 2026-01-10 06:29:31,166 | INFO     | did not find any defunct processes belonging to 913
[2026-01-10 07:30:01] 2026-01-10 06:29:31,166 | INFO     | ready for new job
[2026-01-10 07:30:01] 2026-01-10 06:29:31,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:30:01] 2026-01-10 06:29:31,167 | INFO     | ***************************************
[2026-01-10 07:30:01] 2026-01-10 06:29:31,167 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:30:01] 2026-01-10 06:29:31,167 | INFO     | ***************************************
[2026-01-10 07:30:01] 2026-01-10 06:29:31,167 | INFO     | 
[2026-01-10 07:30:01] 2026-01-10 06:29:31,181 | INFO     | architecture information:
[2026-01-10 07:30:01] 2026-01-10 06:29:31,181 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:30:01] 2026-01-10 06:29:31,187 | INFO     | cat /etc/os-release:
[2026-01-10 07:30:01] NAME="CentOS Linux"
[2026-01-10 07:30:01] VERSION="7 (Core)"
[2026-01-10 07:30:01] ID="centos"
[2026-01-10 07:30:01] ID_LIKE="rhel fedora"
[2026-01-10 07:30:01] VERSION_ID="7"
[2026-01-10 07:30:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:30:01] ANSI_COLOR="0;31"
[2026-01-10 07:30:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:30:01] HOME_URL="https://www.centos.org/"
[2026-01-10 07:30:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:30:01] 
[2026-01-10 07:30:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:30:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:30:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:30:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:30:01] 
[2026-01-10 07:30:01] 2026-01-10 06:29:31,187 | INFO     | ***************************************
[2026-01-10 07:30:01] 2026-01-10 06:29:31,690 | INFO     | executing command: df -mP /tmp/job_11010007/atlas/pilot/slots/0
[2026-01-10 07:30:01] 2026-01-10 06:29:31,696 | INFO     | sufficient remaining disk space (465926356992 B)
[2026-01-10 07:30:01] 2026-01-10 06:29:31,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:30:01] 2026-01-10 06:29:31,697 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:30:01] 2026-01-10 06:29:31,697 | INFO     | update_server=False
[2026-01-10 07:30:01] 2026-01-10 06:29:31,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:30:01] 2026-01-10 06:29:31,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:30:01] 2026-01-10 06:29:31,713 | INFO     | all data control threads have been joined
[2026-01-10 07:30:01] 2026-01-10 06:29:31,896 | INFO     | all payload control threads have been joined
[2026-01-10 07:30:01] 2026-01-10 06:29:32,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:30:01] 2026-01-10 06:29:32,103 | INFO     | aborting loop
[2026-01-10 07:30:01] 2026-01-10 06:29:32,170 | INFO     | all job control threads have been joined
[2026-01-10 07:30:01] 2026-01-10 06:29:32,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:30:01] 2026-01-10 06:29:32,702 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:32,702 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:32,718 | INFO     | [data] control thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:32,901 | INFO     | [payload] control thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,053 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,109 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,176 | INFO     | [job] control thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,278 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,278 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,698 | INFO     | [job] validate thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,875 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:33,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:30:01] 2026-01-10 06:29:33,969 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:34,135 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:34,606 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:37,882 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:42,190 | INFO     | job.realtimelogging is not enabled
[2026-01-10 07:30:01] 2026-01-10 06:29:43,195 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:30:01] 2026-01-10 06:29:47,284 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:30:01] 2026-01-10 06:29:48,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2026-01-10 07:30:01] 2026-01-10 06:29:53,523 | INFO     | all workflow threads have been joined
[2026-01-10 07:30:01] 2026-01-10 06:29:53,523 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:30:01] 2026-01-10 06:29:53,523 | INFO     | traces error code: 0
[2026-01-10 07:30:01] 2026-01-10 06:29:53,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:30:01] 2026-01-10 06:30:01,686 | INFO     | PID=12371 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 07:30:01] 2026-01-10 06:30:01,687 | INFO     | .. there are 3 such processes running
[2026-01-10 07:30:01] 2026-01-10 06:30:01,687 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:30:01] 2026-01-10 06:30:01,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:30:01] 2026-01-10 06:30:01,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:30:01] 2026-01-10 06:30:01,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:30:01] 2026-01-10 06:30:01,687 | INFO     | [monitor] control thread has ended
[2026-01-10 07:30:01] 2026-01-10 06:30:01,741 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:30:01] 2026-01-10 06:30:01,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:30:01] 2026-01-10 06:30:01,744 [wrapper] pilotpid: 12371
[2026-01-10 07:30:01] 2026-01-10 06:30:01,745 [wrapper] Pilot exit status: 0
[2026-01-10 07:30:01] 2026-01-10 06:30:01,750 [wrapper] pandaids: 6963381553
[2026-01-10 07:30:01] 2026-01-10 06:30:01,771 [wrapper] cleanup supervisor_pilot  1270 12372
[2026-01-10 07:30:01] 2026-01-10 06:30:01,773 [wrapper] Test setup, not cleaning
[2026-01-10 07:30:01] 2026-01-10 06:30:01,774 [wrapper] apfmon messages muted
[2026-01-10 07:30:01] 2026-01-10 06:30:01,775 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:30:01] 2026-01-10 06:30:01,776 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:30:01]  *** Error codes and diagnostics ***
[2026-01-10 07:30:01]     "exeErrorCode": 0,
[2026-01-10 07:30:01]     "exeErrorDiag": "",
[2026-01-10 07:30:01]     "pilotErrorCode": 0,
[2026-01-10 07:30:01]     "pilotErrorDiag": "",
[2026-01-10 07:30:01]  *** Listing of results directory ***
[2026-01-10 07:30:01] total 1160528
[2026-01-10 07:30:01] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:21 queuedata.json
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user       100 Jan 10 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:30:01] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 01:06 run_atlas
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user       105 Jan 10 01:06 job.xml
[2026-01-10 07:30:01] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 02:46 start_atlas.sh
[2026-01-10 07:30:01] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 02:46 shared
[2026-01-10 07:30:01] -rw-r--r-- 2 mf493845 unix-user    592614 Jan 10 02:46 input.tar.gz
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      6391 Jan 10 02:46 init_data.xml
[2026-01-10 07:30:01] -rw-r--r-- 2 mf493845 unix-user 391647796 Jan 10 02:46 EVNT.47962006._000113.pool.root.1
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user         0 Jan 10 02:46 boinc_setup_complete
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      8192 Jan 10 02:46 boinc_mmap_file
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user         0 Jan 10 02:46 boinc_lockfile
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      2893 Jan 10 02:46 pandaJob.out
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user    989382 Jan 10 02:46 agis_schedconf.cvmfs.json
[2026-01-10 07:30:01] drwx------ 5 mf493845 unix-user       440 Jan 10 02:46 pilot3
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user 784856148 Jan 10 07:29 HITS.47962010._001663.pool.root.1
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user        95 Jan 10 07:29 pilot_heartbeat.json
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      1027 Jan 10 07:29 memory_monitor_summary.json
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user   1516240 Jan 10 07:29 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user   1557455 Jan 10 07:29 log.47962010._001663.job.log.tgz.1
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      8595 Jan 10 07:29 heartbeat.json
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user       820 Jan 10 07:30 pilotlog.txt
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user   2436886 Jan 10 07:30 log.47962010._001663.job.log.1
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user       353 Jan 10 07:30 output.list
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user       620 Jan 10 07:30 runtime_log
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user   4014080 Jan 10 07:30 result.tar.gz
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user      9221 Jan 10 07:30 runtime_log.err
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user       651 Jan 10 07:30 BsJLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwcmKDm23wM3n.diag
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user     21561 Jan 10 07:30 stderr.txt
[2026-01-10 07:30:01] HITS file was successfully produced:
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user 784856148 Jan 10 07:29 shared/HITS.pool.root.1
[2026-01-10 07:30:01]  *** Contents of shared directory: ***
[2026-01-10 07:30:01] total 1153452
[2026-01-10 07:30:01] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 02:46 start_atlas.sh
[2026-01-10 07:30:01] -rw-r--r-- 2 mf493845 unix-user    592614 Jan 10 02:46 input.tar.gz
[2026-01-10 07:30:01] -rw-r--r-- 2 mf493845 unix-user 391647796 Jan 10 02:46 ATLAS.root_0
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user 784856148 Jan 10 07:29 HITS.pool.root.1
[2026-01-10 07:30:01] -rw------- 1 mf493845 unix-user   4014080 Jan 10 07:30 result.tar.gz
07:30:03 (7439): run_atlas exited; CPU time 127613.798447
07:30:03 (7439): called boinc_finish(0)

</stderr_txt>
]]>

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