Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:19:48 (1662778): wrapper (7.7.26015): starting
17:19:48 (1662778): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 17:19:48] Arguments: --nthreads 9
[2026-01-09 17:19:48] Threads: 9
[2026-01-09 17:19:48] Checking for CVMFS
[2026-01-09 17:19:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:19:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:19:50] 2.13.3.0 6592 14580 135064 154959 3 200 22713227 40960000 17940 16776704 0 19641328 99.801 13475052 44279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:19:50] CVMFS is ok
[2026-01-09 17:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:19:50] Further information can be found at the LHC@home message board.
[2026-01-09 17:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:19:50] Checking for apptainer binary...
[2026-01-09 17:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:19:50] Running /usr/bin/apptainer --version
[2026-01-09 17:19:50] apptainer version 1.4.5-2.el9
[2026-01-09 17:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:19:50] c-211-35-2.aglt2.org
[2026-01-09 17:19:50] apptainer works
[2026-01-09 17:19:50] Set ATHENA_PROC_NUMBER=9
[2026-01-09 17:19:50] Set ATHENA_CORE_NUMBER=9
[2026-01-09 17:19:51] Starting ATLAS job with PandaID=6963379554
[2026-01-09 17:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:27:57 (2644251): wrapper (7.7.26015): starting
01:27:57 (2644251): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 01:27:57] Arguments: --nthreads 10
[2026-01-10 01:27:57] Threads: 10
[2026-01-10 01:27:57] This job has been restarted, cleaning up previous attempt
[2026-01-10 01:27:57] Checking for CVMFS
[2026-01-10 01:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:27:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:27:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:27:57] 2.13.3.0 6592 15068 141512 154970 0 296 24511322 40960001 17077 16776704 0 20535040 99.804 13786779 43767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 01:27:57] CVMFS is ok
[2026-01-10 01:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:27:57] Further information can be found at the LHC@home message board.
[2026-01-10 01:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:27:57] Checking for apptainer binary...
[2026-01-10 01:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:27:57] Running /usr/bin/apptainer --version
[2026-01-10 01:27:57] apptainer version 1.4.5-2.el9
[2026-01-10 01:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:27:57] c-211-35-2.aglt2.org
[2026-01-10 01:27:57] apptainer works
[2026-01-10 01:27:57] Set ATHENA_PROC_NUMBER=10
[2026-01-10 01:27:57] Set ATHENA_CORE_NUMBER=10
[2026-01-10 01:27:57] Starting ATLAS job with PandaID=6963379554
[2026-01-10 01:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:27:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:27:56] 2026-01-10 22:26:57,885 | INFO     | time since job start (57527s) is within the limit (349056.0s)
[2026-01-10 17:27:56] 2026-01-10 22:26:58,897 | INFO     | monitor loop #3607: job 0:6963379554 is in state 'finished'
[2026-01-10 17:27:56] 2026-01-10 22:26:58,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:27:56] 2026-01-10 22:26:59,894 | INFO     | time since job start (57529s) is within the limit (349056.0s)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,563 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 17:27:56] 2026-01-10 22:27:00,576 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2752.5636562500017
[2026-01-10 17:27:56] 2026-01-10 22:27:00,594 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963379554/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,595 | INFO     | extracted standard info from prmon json
[2026-01-10 17:27:56] 2026-01-10 22:27:00,595 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:27:56] 2026-01-10 22:27:00,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:27:56] 2026-01-10 22:27:00,612 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:27:56] 2026-01-10 22:27:00,614 | INFO     | sum of square deviations: 260046273573.7775
[2026-01-10 17:27:56] 2026-01-10 22:27:00,646 | INFO     | sum of deviations: 1816393324218.0193
[2026-01-10 17:27:56] 2026-01-10 22:27:00,647 | INFO     | mean x: 1768055254.1876988
[2026-01-10 17:27:56] 2026-01-10 22:27:00,647 | INFO     | mean y: 3237449.2428419935
[2026-01-10 17:27:56] 2026-01-10 22:27:00,647 | INFO     | intersect: -12346425233.55658
[2026-01-10 17:27:56] 2026-01-10 22:27:00,648 | INFO     | chi2: 6.680753728981014
[2026-01-10 17:27:56] 2026-01-10 22:27:00,650 | INFO     | sum of square deviations: 255932964375.19803
[2026-01-10 17:27:56] 2026-01-10 22:27:00,666 | INFO     | sum of deviations: 2211059171445.719
[2026-01-10 17:27:56] 2026-01-10 22:27:00,667 | INFO     | mean x: 1768055101.704691
[2026-01-10 17:27:56] 2026-01-10 22:27:00,667 | INFO     | mean y: 3252082.063965885
[2026-01-10 17:27:56] 2026-01-10 22:27:00,667 | INFO     | intersect: -15271351007.026777
[2026-01-10 17:27:56] 2026-01-10 22:27:00,668 | INFO     | chi2: 2.87765994528671
[2026-01-10 17:27:56] 2026-01-10 22:27:00,668 | INFO     | current chi2=2.87765994528671 (change=56.92611848864504 %)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,669 | INFO     | sum of square deviations: 251863112749.39536
[2026-01-10 17:27:56] 2026-01-10 22:27:00,686 | INFO     | sum of deviations: 2305119754350.575
[2026-01-10 17:27:56] 2026-01-10 22:27:00,686 | INFO     | mean x: 1768054949.2186496
[2026-01-10 17:27:56] 2026-01-10 22:27:00,686 | INFO     | mean y: 3255598.4726688103
[2026-01-10 17:27:56] 2026-01-10 22:27:00,686 | INFO     | intersect: -16178464486.422916
[2026-01-10 17:27:56] 2026-01-10 22:27:00,687 | INFO     | chi2: 2.441351180561816
[2026-01-10 17:27:56] 2026-01-10 22:27:00,687 | INFO     | current chi2=2.441351180561816 (change=15.16192924183136 %)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,687 | INFO     | right removable region: 932
[2026-01-10 17:27:56] 2026-01-10 22:27:00,689 | INFO     | sum of square deviations: 255931187999.61002
[2026-01-10 17:27:56] 2026-01-10 22:27:00,706 | INFO     | sum of deviations: 1532675335020.3499
[2026-01-10 17:27:56] 2026-01-10 22:27:00,706 | INFO     | mean x: 1768055406.7036247
[2026-01-10 17:27:56] 2026-01-10 22:27:00,706 | INFO     | mean y: 3247951.249466951
[2026-01-10 17:27:56] 2026-01-10 22:27:00,706 | INFO     | intersect: -10584968881.503828
[2026-01-10 17:27:56] 2026-01-10 22:27:00,707 | INFO     | chi2: 4.601043120396239
[2026-01-10 17:27:56] 2026-01-10 22:27:00,708 | INFO     | current chi2=4.601043120396239 (change=31.129879845189024 %)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,709 | INFO     | sum of square deviations: 251860017141.12732
[2026-01-10 17:27:56] 2026-01-10 22:27:00,725 | INFO     | sum of deviations: 1453990574867.3953
[2026-01-10 17:27:56] 2026-01-10 22:27:00,725 | INFO     | mean x: 1768055559.2143624
[2026-01-10 17:27:56] 2026-01-10 22:27:00,725 | INFO     | mean y: 3250898.463022508
[2026-01-10 17:27:56] 2026-01-10 22:27:00,725 | INFO     | intersect: -10203752770.162546
[2026-01-10 17:27:56] 2026-01-10 22:27:00,727 | INFO     | chi2: 4.53425044877085
[2026-01-10 17:27:56] 2026-01-10 22:27:00,727 | INFO     | current chi2=4.53425044877085 (change=1.4516854086696178 %)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,727 | INFO     | left removable region: 20
[2026-01-10 17:27:56] 2026-01-10 22:27:00,728 | INFO     | sum of square deviations: 235235433798.31494
[2026-01-10 17:27:56] 2026-01-10 22:27:00,744 | INFO     | sum of deviations: 1826330195891.9614
[2026-01-10 17:27:56] 2026-01-10 22:27:00,745 | INFO     | mean x: 1768055528.7642543
[2026-01-10 17:27:56] 2026-01-10 22:27:00,745 | INFO     | mean y: 3273342.9067982454
[2026-01-10 17:27:56] 2026-01-10 22:27:00,745 | INFO     | intersect: -13723626333.96925
[2026-01-10 17:27:56] 2026-01-10 22:27:00,751 | INFO     | chi2: 0.23676817176268608
[2026-01-10 17:27:56] 2026-01-10 22:27:00,752 | INFO     | current memory leak: 7.76 B/s (using 912 data points, chi2=0.24)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,753 | INFO     | could have reported an average CPU frequency of 2703 MHz (35 samples)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,753 | INFO     | ..............................
[2026-01-10 17:27:56] 2026-01-10 22:27:00,753 | INFO     | . Timing measurements:
[2026-01-10 17:27:56] 2026-01-10 22:27:00,753 | INFO     | . get job = 0 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,753 | INFO     | . initial setup = 2 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,754 | INFO     | . payload setup = 6 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,754 | INFO     | . stage-in = 0 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,754 | INFO     | . payload execution = 57484 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,754 | INFO     | . stage-out = 5 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,754 | INFO     | . log creation = 1 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,754 | INFO     | ..............................
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | 
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | job summary report
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | --------------------------------------------------
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | PanDA job id: 6963379554
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | task id: 47962010
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | errors: (none)
[2026-01-10 17:27:56] 2026-01-10 22:27:00,947 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | pilot state: finished 
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | transexitcode: 0
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | exeerrorcode: 0
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | exeerrordiag: 
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | exitcode: 0
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | exitmsg: OK
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | cpuconsumptiontime: 278037 s
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | nevents: 900
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | neventsw: 0
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | pid: 2664764
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | pgrp: 2664764
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | corecount: 10
[2026-01-10 17:27:56] 2026-01-10 22:27:00,948 | INFO     | event service: False
[2026-01-10 17:27:56] 2026-01-10 22:27:00,949 | INFO     | sizes: {0: 2284622, 5: 2284884, 11: 2284940, 57495: 2336986, 57496: 2336985, 57502: 2346035, 57504: 2346219, 57515: 2346465}
[2026-01-10 17:27:56] 2026-01-10 22:27:00,949 | INFO     | --------------------------------------------------
[2026-01-10 17:27:56] 2026-01-10 22:27:00,949 | INFO     | 
[2026-01-10 17:27:56] 2026-01-10 22:27:00,949 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 17:27:56] 2026-01-10 22:27:01,044 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,044 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,044 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | job 6963379554 has completed (purged errors)
[2026-01-10 17:27:56] 2026-01-10 22:27:01,046 | INFO     | overall cleanup function is called
[2026-01-10 17:27:56] 2026-01-10 22:27:02,074 | INFO     | --- collectZombieJob: --- 10, [2664764]
[2026-01-10 17:27:56] 2026-01-10 22:27:02,074 | INFO     | zombie collector waiting for pid 2664764
[2026-01-10 17:27:56] 2026-01-10 22:27:02,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:27:56] 2026-01-10 22:27:02,074 | INFO     | collected zombie processes
[2026-01-10 17:27:56] 2026-01-10 22:27:02,074 | INFO     | will attempt to kill all subprocesses of pid=2664764
[2026-01-10 17:27:56] 2026-01-10 22:27:02,580 | INFO     | process IDs to be killed: [2664764] (in reverse order)
[2026-01-10 17:27:56] 2026-01-10 22:27:02,703 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:27:56] 2026-01-10 22:27:02,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:27:56] 2026-01-10 22:27:02,728 | INFO     | did not find any defunct processes belonging to 2664764
[2026-01-10 17:27:56] 2026-01-10 22:27:02,740 | INFO     | did not find any defunct processes belonging to 2664764
[2026-01-10 17:27:56] 2026-01-10 22:27:02,740 | INFO     | ready for new job
[2026-01-10 17:27:56] 2026-01-10 22:27:02,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:27:56] 2026-01-10 22:27:02,745 | INFO     | ***************************************
[2026-01-10 17:27:56] 2026-01-10 22:27:02,746 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:27:56] 2026-01-10 22:27:02,746 | INFO     | ***************************************
[2026-01-10 17:27:56] 2026-01-10 22:27:02,746 | INFO     | 
[2026-01-10 17:27:56] 2026-01-10 22:27:02,751 | INFO     | architecture information:
[2026-01-10 17:27:56] 2026-01-10 22:27:02,752 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:27:56] 2026-01-10 22:27:02,773 | INFO     | cat /etc/os-release:
[2026-01-10 17:27:56] NAME="CentOS Linux"
[2026-01-10 17:27:56] VERSION="7 (Core)"
[2026-01-10 17:27:56] ID="centos"
[2026-01-10 17:27:56] ID_LIKE="rhel fedora"
[2026-01-10 17:27:56] VERSION_ID="7"
[2026-01-10 17:27:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:27:56] ANSI_COLOR="0;31"
[2026-01-10 17:27:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:27:56] HOME_URL="https://www.centos.org/"
[2026-01-10 17:27:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:27:56] 
[2026-01-10 17:27:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:27:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:27:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:27:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:27:56] 
[2026-01-10 17:27:56] 2026-01-10 22:27:02,773 | INFO     | ***************************************
[2026-01-10 17:27:56] 2026-01-10 22:27:03,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 17:27:56] 2026-01-10 22:27:03,343 | INFO     | sufficient remaining disk space (128855310336 B)
[2026-01-10 17:27:56] 2026-01-10 22:27:03,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:27:56] 2026-01-10 22:27:03,344 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:27:56] 2026-01-10 22:27:03,344 | INFO     | update_server=False
[2026-01-10 17:27:56] 2026-01-10 22:27:03,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:27:56] 2026-01-10 22:27:03,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:27:56] 2026-01-10 22:27:03,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:27:56] 2026-01-10 22:27:03,349 | INFO     | aborting loop
[2026-01-10 17:27:56] 2026-01-10 22:27:03,587 | INFO     | all payload control threads have been joined
[2026-01-10 17:27:56] 2026-01-10 22:27:04,027 | INFO     | all data control threads have been joined
[2026-01-10 17:27:56] 2026-01-10 22:27:04,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:27:56] 2026-01-10 22:27:04,350 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,355 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,374 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,394 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,395 | INFO     | [job] validate thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,594 | INFO     | [payload] control thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,721 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:04,769 | INFO     | all job control threads have been joined
[2026-01-10 17:27:56] 2026-01-10 22:27:05,033 | INFO     | [data] control thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:05,119 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:05,201 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:05,352 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:05,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:05,775 | INFO     | [job] control thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:05,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:27:56] 2026-01-10 22:27:06,968 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:08,215 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:27:56] 2026-01-10 22:27:33,341 | INFO     | PID=2651691 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:27:56] 2026-01-10 22:27:33,341 | INFO     | .. there are 13 such processes running
[2026-01-10 17:27:56] 2026-01-10 22:27:33,342 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:27:56] 2026-01-10 22:27:33,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:27:56] 2026-01-10 22:27:33,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:27:56] 2026-01-10 22:27:49,360 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:27:56] 2026-01-10 22:27:50,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112082978624)>', '<ExcThread(monitor, started 140111547193088)>']
[2026-01-10 17:27:56] 2026-01-10 22:27:50,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:27:56] 2026-01-10 22:27:50,443 | INFO     | [monitor] control thread has ended
[2026-01-10 17:27:56] 2026-01-10 22:27:55,446 | INFO     | all workflow threads have been joined
[2026-01-10 17:27:56] 2026-01-10 22:27:55,446 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:27:56] 2026-01-10 22:27:55,446 | INFO     | traces error code: 0
[2026-01-10 17:27:56] 2026-01-10 22:27:55,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:27:56] 2026-01-10 22:27:55,613 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:27:56] 2026-01-10 22:27:55,616 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:27:56] 2026-01-10 22:27:55,618 [wrapper] pilotpid: 2651691
[2026-01-10 17:27:56] 2026-01-10 22:27:55,620 [wrapper] Pilot exit status: 0
[2026-01-10 17:27:56] 2026-01-10 22:27:55,629 [wrapper] pandaids: 6963379554 6963379554
[2026-01-10 17:27:56] 2026-01-10 22:27:55,700 [wrapper] cleanup supervisor_pilot   83243 2651692
[2026-01-10 17:27:56] 2026-01-10 22:27:55,703 [wrapper] Test setup, not cleaning
[2026-01-10 17:27:56] 2026-01-10 22:27:55,705 [wrapper] apfmon messages muted
[2026-01-10 17:27:56] 2026-01-10 22:27:55,715 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:27:56] 2026-01-10 22:27:55,732 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:27:56]  *** Error codes and diagnostics ***
[2026-01-10 17:27:56]     "exeErrorCode": 0,
[2026-01-10 17:27:56]     "exeErrorDiag": "",
[2026-01-10 17:27:56]     "pilotErrorCode": 0,
[2026-01-10 17:27:56]     "pilotErrorDiag": "",
[2026-01-10 17:27:56]  *** Listing of results directory ***
[2026-01-10 17:27:56] total 1576712
[2026-01-10 17:27:56] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 17:27:56] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:27:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:19 run_atlas
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:19 job.xml
[2026-01-10 17:27:56] -rw-r--r--. 3 boincer umatlas 392887092 Jan  9 17:19 EVNT.47962006._000016.pool.root.1
[2026-01-10 17:27:56] -rw-r--r--. 3 boincer umatlas 392887092 Jan  9 17:19 ATLAS.root_0
[2026-01-10 17:27:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:19 start_atlas.sh
[2026-01-10 17:27:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:19 shared
[2026-01-10 17:27:56] -rw-r--r--. 2 boincer umatlas    592613 Jan  9 17:19 input.tar.gz
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:19 boinc_lockfile
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas      2892 Jan 10 01:27 pandaJob.out
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas        57 Jan 10 01:27 setup.sh.local
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas    989374 Jan 10 01:28 agis_schedconf.cvmfs.json
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas       533 Jan 10 17:17 boinc_task_state.xml
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas      6862 Jan 10 17:21 init_data.xml
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas 805332485 Jan 10 17:25 HITS.47962010._001415.pool.root.1
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas      1064 Jan 10 17:26 memory_monitor_summary.json
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:26 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas   2302437 Jan 10 17:26 log.47962010._001415.job.log.tgz.1
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas      8652 Jan 10 17:27 heartbeat.json
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas        96 Jan 10 17:27 pilot_heartbeat.json
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 17:27 boinc_mmap_file
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas        29 Jan 10 17:27 wrapper_checkpoint.txt
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas      4825 Jan 10 17:27 pilotlog.txt
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas   7452383 Jan 10 17:27 log.47962010._001415.job.log.1
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas       353 Jan 10 17:27 output.list
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas       620 Jan 10 17:27 runtime_log
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas   9779200 Jan 10 17:27 result.tar.gz
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas      9440 Jan 10 17:27 runtime_log.err
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas       791 Jan 10 17:27 HnkKDmRvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqQhKDmox03wm.diag
[2026-01-10 17:27:56] -rw-r--r--. 1 boincer umatlas     23415 Jan 10 17:27 stderr.txt
[2026-01-10 17:27:56] HITS file was successfully produced:
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas 805332485 Jan 10 17:25 shared/HITS.pool.root.1
[2026-01-10 17:27:56]  *** Contents of shared directory: ***
[2026-01-10 17:27:56] total 1180296
[2026-01-10 17:27:56] -rw-r--r--. 3 boincer umatlas 392887092 Jan  9 17:19 ATLAS.root_0
[2026-01-10 17:27:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:19 start_atlas.sh
[2026-01-10 17:27:56] -rw-r--r--. 2 boincer umatlas    592613 Jan  9 17:19 input.tar.gz
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas 805332485 Jan 10 17:25 HITS.pool.root.1
[2026-01-10 17:27:56] -rw-------. 1 boincer umatlas   9779200 Jan 10 17:27 result.tar.gz
17:27:57 (2644251): run_atlas exited; CPU time 279169.092286
17:27:57 (2644251): called boinc_finish(0)

</stderr_txt>
]]>

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