Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:30 (31035): wrapper (7.7.26015): starting
17:20:30 (31035): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:20:30] Arguments: --nthreads 8
[2026-01-09 17:20:30] Threads: 8
[2026-01-09 17:20:30] Checking for CVMFS
[2026-01-09 17:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:20:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:20:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:20:30] 2.11.2.0 2850 99746 87588 154959 3 56 13736589 20275201 1 130560 0 20697726 99.732 7001799 26257 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:20:30] CVMFS is ok
[2026-01-09 17:20:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:20:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:20:30] Further information can be found at the LHC@home message board.
[2026-01-09 17:20:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:20:30] Checking for apptainer binary...
[2026-01-09 17:20:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:20:30] Running /usr/bin/apptainer --version
[2026-01-09 17:20:30] apptainer version 1.3.2-1.el7
[2026-01-09 17:20:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:20:32] c-204-4.aglt2.org
[2026-01-09 17:20:32] apptainer works
[2026-01-09 17:20:32] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:20:32] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:20:32] Starting ATLAS job with PandaID=6963375897
[2026-01-09 17:20:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:27:14]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:27:14] 2026-01-10 11:26:11,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:27:14] 2026-01-10 11:26:11,529 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:27:14] 2026-01-10 11:26:11,530 | INFO     | sum of square deviations: 142669429957.7098
[2026-01-10 06:27:14] 2026-01-10 11:26:11,542 | INFO     | sum of deviations: 757902893507.4606
[2026-01-10 06:27:14] 2026-01-10 11:26:11,542 | INFO     | mean x: 1768020799.103627
[2026-01-10 06:27:14] 2026-01-10 11:26:11,542 | INFO     | mean y: 3109441.1567357513
[2026-01-10 06:27:14] 2026-01-10 11:26:11,543 | INFO     | intersect: -9389148450.524837
[2026-01-10 06:27:14] 2026-01-10 11:26:11,543 | INFO     | chi2: 6.385048600555571
[2026-01-10 06:27:14] 2026-01-10 11:26:11,544 | INFO     | sum of square deviations: 139915418120.87616
[2026-01-10 06:27:14] 2026-01-10 11:26:11,556 | INFO     | sum of deviations: 1017818109652.3131
[2026-01-10 06:27:14] 2026-01-10 11:26:11,557 | INFO     | mean x: 1768020646.6075618
[2026-01-10 06:27:14] 2026-01-10 11:26:11,557 | INFO     | mean y: 3123828.359843546
[2026-01-10 06:27:14] 2026-01-10 11:26:11,557 | INFO     | intersect: -12858385335.710402
[2026-01-10 06:27:14] 2026-01-10 11:26:11,558 | INFO     | chi2: 3.6042679704304694
[2026-01-10 06:27:14] 2026-01-10 11:26:11,558 | INFO     | current chi2=3.6042679704304694 (change=43.551440311404086 %)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,559 | INFO     | sum of square deviations: 137197081371.5185
[2026-01-10 06:27:14] 2026-01-10 11:26:11,571 | INFO     | sum of deviations: 1165012351774.1208
[2026-01-10 06:27:14] 2026-01-10 11:26:11,571 | INFO     | mean x: 1768020494.1115487
[2026-01-10 06:27:14] 2026-01-10 11:26:11,571 | INFO     | mean y: 3132082.975065617
[2026-01-10 06:27:14] 2026-01-10 11:26:11,571 | INFO     | intersect: -15010056923.954762
[2026-01-10 06:27:14] 2026-01-10 11:26:11,572 | INFO     | chi2: 2.644110853879002
[2026-01-10 06:27:14] 2026-01-10 11:26:11,572 | INFO     | current chi2=2.644110853879002 (change=26.639448687739847 %)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,573 | INFO     | sum of square deviations: 134514094549.59319
[2026-01-10 06:27:14] 2026-01-10 11:26:11,585 | INFO     | sum of deviations: 1188091863668.746
[2026-01-10 06:27:14] 2026-01-10 11:26:11,585 | INFO     | mean x: 1768020341.6129458
[2026-01-10 06:27:14] 2026-01-10 11:26:11,585 | INFO     | mean y: 3133386.8626155877
[2026-01-10 06:27:14] 2026-01-10 11:26:11,585 | INFO     | intersect: -15612855329.447935
[2026-01-10 06:27:14] 2026-01-10 11:26:11,586 | INFO     | chi2: 2.5256137425011294
[2026-01-10 06:27:14] 2026-01-10 11:26:11,586 | INFO     | current chi2=2.5256137425011294 (change=4.48154854037354 %)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,586 | INFO     | right removable region: 756
[2026-01-10 06:27:14] 2026-01-10 11:26:11,587 | INFO     | sum of square deviations: 139915180709.09
[2026-01-10 06:27:14] 2026-01-10 11:26:11,599 | INFO     | sum of deviations: 525622014160.9061
[2026-01-10 06:27:14] 2026-01-10 11:26:11,599 | INFO     | mean x: 1768020951.6062582
[2026-01-10 06:27:14] 2026-01-10 11:26:11,600 | INFO     | mean y: 3122281.0195567147
[2026-01-10 06:27:14] 2026-01-10 11:26:11,600 | INFO     | intersect: -6638835574.820085
[2026-01-10 06:27:14] 2026-01-10 11:26:11,600 | INFO     | chi2: 4.0008099130948995
[2026-01-10 06:27:14] 2026-01-10 11:26:11,601 | INFO     | current chi2=4.0008099130948995 (change=37.34096381432736 %)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,602 | INFO     | sum of square deviations: 137196560004.7406
[2026-01-10 06:27:14] 2026-01-10 11:26:11,614 | INFO     | sum of deviations: 481154100722.2516
[2026-01-10 06:27:14] 2026-01-10 11:26:11,614 | INFO     | mean x: 1768021104.1102362
[2026-01-10 06:27:14] 2026-01-10 11:26:11,614 | INFO     | mean y: 3124774.5446194224
[2026-01-10 06:27:14] 2026-01-10 11:26:11,614 | INFO     | intersect: -6197399527.061257
[2026-01-10 06:27:14] 2026-01-10 11:26:11,615 | INFO     | chi2: 3.961737057815896
[2026-01-10 06:27:14] 2026-01-10 11:26:11,615 | INFO     | current chi2=3.961737057815896 (change=0.9766236369070105 %)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,615 | INFO     | left removable region: 20
[2026-01-10 06:27:14] 2026-01-10 11:26:11,616 | INFO     | sum of square deviations: 123626818020.23845
[2026-01-10 06:27:14] 2026-01-10 11:26:11,627 | INFO     | sum of deviations: 857831095078.5701
[2026-01-10 06:27:14] 2026-01-10 11:26:11,627 | INFO     | mean x: 1768020921.120924
[2026-01-10 06:27:14] 2026-01-10 11:26:11,627 | INFO     | mean y: 3152213.398097826
[2026-01-10 06:27:14] 2026-01-10 11:26:11,628 | INFO     | intersect: -12264924787.812897
[2026-01-10 06:27:14] 2026-01-10 11:26:11,628 | INFO     | chi2: 0.07064599678327484
[2026-01-10 06:27:14] 2026-01-10 11:26:11,629 | INFO     | current memory leak: 6.94 B/s (using 736 data points, chi2=0.07)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,629 | INFO     | could have reported an average CPU frequency of 2181 MHz (29 samples)
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | ..............................
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . Timing measurements:
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . get job = 0 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . initial setup = 2 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . payload setup = 10 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . stage-in = 0 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . payload execution = 47079 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,630 | INFO     | . stage-out = 3 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,631 | INFO     | . log creation = 0 s
[2026-01-10 06:27:14] 2026-01-10 11:26:11,631 | INFO     | ..............................
[2026-01-10 06:27:14] 2026-01-10 11:26:11,855 | INFO     | PID=2338 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:27:14] 2026-01-10 11:26:12,185 | INFO     | 
[2026-01-10 06:27:14] 2026-01-10 11:26:12,186 | INFO     | job summary report
[2026-01-10 06:27:14] 2026-01-10 11:26:12,186 | INFO     | --------------------------------------------------
[2026-01-10 06:27:14] 2026-01-10 11:26:12,186 | INFO     | PanDA job id: 6963375897
[2026-01-10 06:27:14] 2026-01-10 11:26:12,186 | INFO     | task id: 47962010
[2026-01-10 06:27:14] 2026-01-10 11:26:12,186 | INFO     | errors: (none)
[2026-01-10 06:27:14] 2026-01-10 11:26:12,186 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:27:14] 2026-01-10 11:26:12,187 | INFO     | pilot state: finished 
[2026-01-10 06:27:14] 2026-01-10 11:26:12,187 | INFO     | transexitcode: 0
[2026-01-10 06:27:14] 2026-01-10 11:26:12,187 | INFO     | exeerrorcode: 0
[2026-01-10 06:27:14] 2026-01-10 11:26:12,187 | INFO     | exeerrordiag: 
[2026-01-10 06:27:14] 2026-01-10 11:26:12,187 | INFO     | exitcode: 0
[2026-01-10 06:27:14] 2026-01-10 11:26:12,188 | INFO     | exitmsg: OK
[2026-01-10 06:27:14] 2026-01-10 11:26:12,188 | INFO     | cpuconsumptiontime: 365335 s
[2026-01-10 06:27:14] 2026-01-10 11:26:12,188 | INFO     | nevents: 900
[2026-01-10 06:27:14] 2026-01-10 11:26:12,188 | INFO     | neventsw: 0
[2026-01-10 06:27:14] 2026-01-10 11:26:12,188 | INFO     | pid: 8854
[2026-01-10 06:27:14] 2026-01-10 11:26:12,188 | INFO     | pgrp: 8854
[2026-01-10 06:27:14] 2026-01-10 11:26:12,189 | INFO     | corecount: 8
[2026-01-10 06:27:14] 2026-01-10 11:26:12,189 | INFO     | event service: False
[2026-01-10 06:27:14] 2026-01-10 11:26:12,189 | INFO     | sizes: {0: 2284451, 1: 2284650, 7: 2284912, 11: 2284940, 47094: 2331599, 47098: 2340777, 47105: 2340967}
[2026-01-10 06:27:14] 2026-01-10 11:26:12,189 | INFO     | --------------------------------------------------
[2026-01-10 06:27:14] 2026-01-10 11:26:12,189 | INFO     | 
[2026-01-10 06:27:14] 2026-01-10 11:26:12,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 06:27:14] 2026-01-10 11:26:12,220 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,221 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,221 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,221 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,224 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:27:14] 2026-01-10 11:26:12,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,224 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:27:14] 2026-01-10 11:26:12,224 | INFO     | job 6963375897 has completed (purged errors)
[2026-01-10 06:27:14] 2026-01-10 11:26:12,225 | INFO     | overall cleanup function is called
[2026-01-10 06:27:14] 2026-01-10 11:26:13,236 | INFO     | --- collectZombieJob: --- 10, [8854]
[2026-01-10 06:27:14] 2026-01-10 11:26:13,237 | INFO     | zombie collector waiting for pid 8854
[2026-01-10 06:27:14] 2026-01-10 11:26:13,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:27:14] 2026-01-10 11:26:13,237 | INFO     | collected zombie processes
[2026-01-10 06:27:14] 2026-01-10 11:26:13,237 | INFO     | will attempt to kill all subprocesses of pid=8854
[2026-01-10 06:27:14] 2026-01-10 11:26:13,328 | INFO     | process IDs to be killed: [8854] (in reverse order)
[2026-01-10 06:27:14] 2026-01-10 11:26:13,385 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:27:14] 2026-01-10 11:26:13,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:27:14] 2026-01-10 11:26:13,389 | INFO     | did not find any defunct processes belonging to 8854
[2026-01-10 06:27:14] 2026-01-10 11:26:13,392 | INFO     | did not find any defunct processes belonging to 8854
[2026-01-10 06:27:14] 2026-01-10 11:26:13,392 | INFO     | ready for new job
[2026-01-10 06:27:14] 2026-01-10 11:26:13,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:27:14] 2026-01-10 11:26:13,396 | INFO     | ***************************************
[2026-01-10 06:27:14] 2026-01-10 11:26:13,396 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:27:14] 2026-01-10 11:26:13,396 | INFO     | ***************************************
[2026-01-10 06:27:14] 2026-01-10 11:26:13,396 | INFO     | 
[2026-01-10 06:27:14] 2026-01-10 11:26:13,396 | INFO     | architecture information:
[2026-01-10 06:27:14] 2026-01-10 11:26:13,397 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:27:14] 2026-01-10 11:26:13,417 | INFO     | cat /etc/os-release:
[2026-01-10 06:27:14] NAME="CentOS Linux"
[2026-01-10 06:27:14] VERSION="7 (Core)"
[2026-01-10 06:27:14] ID="centos"
[2026-01-10 06:27:14] ID_LIKE="rhel fedora"
[2026-01-10 06:27:14] VERSION_ID="7"
[2026-01-10 06:27:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:27:14] ANSI_COLOR="0;31"
[2026-01-10 06:27:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:27:14] HOME_URL="https://www.centos.org/"
[2026-01-10 06:27:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:27:14] 
[2026-01-10 06:27:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:27:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:27:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:27:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:27:14] 
[2026-01-10 06:27:14] 2026-01-10 11:26:13,418 | INFO     | ***************************************
[2026-01-10 06:27:14] 2026-01-10 11:26:13,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 06:27:14] 2026-01-10 11:26:13,946 | INFO     | sufficient remaining disk space (17620271104 B)
[2026-01-10 06:27:14] 2026-01-10 11:26:13,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:27:14] 2026-01-10 11:26:13,947 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:27:14] 2026-01-10 11:26:13,947 | INFO     | update_server=False
[2026-01-10 06:27:14] 2026-01-10 11:26:13,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:27:14] 2026-01-10 11:26:14,179 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 06:27:14] 2026-01-10 11:26:14,179 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 06:27:14] 2026-01-10 11:26:14,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:27:14] 2026-01-10 11:26:14,180 | INFO     | will abort loop
[2026-01-10 06:27:14] 2026-01-10 11:26:14,539 | INFO     | all data control threads have been joined
[2026-01-10 06:27:14] 2026-01-10 11:26:14,844 | INFO     | all job control threads have been joined
[2026-01-10 06:27:14] 2026-01-10 11:26:14,953 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:27:14] 2026-01-10 11:26:15,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:27:14] 2026-01-10 11:26:15,185 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,420 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,447 | INFO     | all payload control threads have been joined
[2026-01-10 06:27:14] 2026-01-10 11:26:15,545 | INFO     | [data] control thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,576 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,605 | INFO     | [job] validate thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,656 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,743 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,792 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,850 | INFO     | [job] control thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:15,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:16,409 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:16,453 | INFO     | [payload] control thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:16,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:27:14] 2026-01-10 11:26:17,096 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:17,758 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:19,186 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:27:14] 2026-01-10 11:26:43,979 | INFO     | PID=2338 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 06:27:14] 2026-01-10 11:26:43,980 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:27:14] 2026-01-10 11:26:43,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:27:14] 2026-01-10 11:26:43,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:27:14] 2026-01-10 11:27:07,627 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:27:14] 2026-01-10 11:27:08,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457663493952)>', '<ExcThread(monitor, started 140456637757184)>']
[2026-01-10 06:27:14] 2026-01-10 11:27:09,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:27:14] 2026-01-10 11:27:09,086 | INFO     | [monitor] control thread has ended
[2026-01-10 06:27:14] 2026-01-10 11:27:13,955 | INFO     | all workflow threads have been joined
[2026-01-10 06:27:14] 2026-01-10 11:27:13,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:27:14] 2026-01-10 11:27:13,956 | INFO     | traces error code: 0
[2026-01-10 06:27:14] 2026-01-10 11:27:13,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:27:14] 2026-01-10 11:27:14,081 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:27:14] 2026-01-10 11:27:14,086 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:27:14] 2026-01-10 11:27:14,090 [wrapper] pilotpid: 2338
[2026-01-10 06:27:14] 2026-01-10 11:27:14,094 [wrapper] Pilot exit status: 0
[2026-01-10 06:27:14] 2026-01-10 11:27:14,109 [wrapper] pandaids: 6963375897
[2026-01-10 06:27:14] 2026-01-10 11:27:14,164 [wrapper] cleanup supervisor_pilot 28405 2339
[2026-01-10 06:27:14] 2026-01-10 11:27:14,170 [wrapper] Test setup, not cleaning
[2026-01-10 06:27:14] 2026-01-10 11:27:14,175 [wrapper] apfmon messages muted
[2026-01-10 06:27:14] 2026-01-10 11:27:14,180 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:27:14] 2026-01-10 11:27:14,185 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:27:14]  *** Error codes and diagnostics ***
[2026-01-10 06:27:14]     "exeErrorCode": 0,
[2026-01-10 06:27:14]     "exeErrorDiag": "",
[2026-01-10 06:27:14]     "pilotErrorCode": 0,
[2026-01-10 06:27:14]     "pilotErrorDiag": "",
[2026-01-10 06:27:14]  *** Listing of results directory ***
[2026-01-10 06:27:14] total 1177540
[2026-01-10 06:27:14] -rwx------ 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas       100 Jan  9 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:27:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 17:20 run_atlas
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas       105 Jan  9 17:20 job.xml
[2026-01-10 06:27:14] -rw-r--r-- 2 boincer umatlas 392458857 Jan  9 17:20 EVNT.47962006._000084.pool.root.1
[2026-01-10 06:27:14] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:20 start_atlas.sh
[2026-01-10 06:27:14] drwxrwx--x 2 boincer umatlas      4096 Jan  9 17:20 shared
[2026-01-10 06:27:14] -rw-r--r-- 2 boincer umatlas    592618 Jan  9 17:20 input.tar.gz
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas         0 Jan  9 17:20 boinc_lockfile
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas      2892 Jan  9 17:20 pandaJob.out
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas        57 Jan  9 17:20 setup.sh.local
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas    989375 Jan  9 17:20 agis_schedconf.cvmfs.json
[2026-01-10 06:27:14] drwx------ 5 boincer umatlas      4096 Jan  9 17:20 pilot3
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas       532 Jan 10 06:12 boinc_task_state.xml
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas      5910 Jan 10 06:18 init_data.xml
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas 792503455 Jan 10 06:25 HITS.47962010._001058.pool.root.1
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas      1062 Jan 10 06:25 memory_monitor_summary.json
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas   1516240 Jan 10 06:26 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas   1990184 Jan 10 06:26 log.47962010._001058.job.log.tgz.1
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas      8661 Jan 10 06:26 heartbeat.json
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas        95 Jan 10 06:26 pilot_heartbeat.json
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 06:27 boinc_mmap_file
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas        29 Jan 10 06:27 wrapper_checkpoint.txt
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas      4931 Jan 10 06:27 pilotlog.txt
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas   6470826 Jan 10 06:27 log.47962010._001058.job.log.1
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas       353 Jan 10 06:27 output.list
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas       620 Jan 10 06:27 runtime_log
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas   8478720 Jan 10 06:27 result.tar.gz
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas      9338 Jan 10 06:27 runtime_log.err
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas       667 Jan 10 06:27 1iEMDmFvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmbmKDmTWSyXm.diag
[2026-01-10 06:27:14] -rw-r--r-- 1 boincer umatlas     21092 Jan 10 06:27 stderr.txt
[2026-01-10 06:27:14] HITS file was successfully produced:
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas 792503455 Jan 10 06:25 shared/HITS.pool.root.1
[2026-01-10 06:27:14]  *** Contents of shared directory: ***
[2026-01-10 06:27:14] total 1166076
[2026-01-10 06:27:14] -rw-r--r-- 2 boincer umatlas 392458857 Jan  9 17:20 ATLAS.root_0
[2026-01-10 06:27:14] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:20 start_atlas.sh
[2026-01-10 06:27:14] -rw-r--r-- 2 boincer umatlas    592618 Jan  9 17:20 input.tar.gz
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas 792503455 Jan 10 06:25 HITS.pool.root.1
[2026-01-10 06:27:14] -rw------- 1 boincer umatlas   8478720 Jan 10 06:27 result.tar.gz
06:27:16 (31035): run_atlas exited; CPU time 363273.643256
06:27:16 (31035): called boinc_finish(0)

</stderr_txt>
]]>

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