Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:42 (1747379): wrapper (7.7.26015): starting
00:01:42 (1747379): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 00:01:42] Arguments: --nthreads 12
[2026-01-10 00:01:42] Threads: 12
[2026-01-10 00:01:42] Checking for CVMFS
[2026-01-10 00:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:01:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:01:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:01:44] 2.13.3.0 12977 94401 614608 154968 2 378 16962543 32935937 23335 16776704 0 419338032 99.549 509048200 33666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 00:01:44] CVMFS is ok
[2026-01-10 00:01:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:01:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:01:44] Further information can be found at the LHC@home message board.
[2026-01-10 00:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:01:44] Checking for apptainer binary...
[2026-01-10 00:01:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:01:44] Running /usr/bin/apptainer --version
[2026-01-10 00:01:44] apptainer version 1.4.5-2.el9
[2026-01-10 00:01:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:01:45] c6-12-29-1.aglt2.org
[2026-01-10 00:01:45] apptainer works
[2026-01-10 00:01:45] Set ATHENA_PROC_NUMBER=12
[2026-01-10 00:01:45] Set ATHENA_CORE_NUMBER=12
[2026-01-10 00:01:45] Starting ATLAS job with PandaID=6963379036
[2026-01-10 00:01:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:40:32]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:40:32] 2026-01-10 18:39:20,905 | INFO     | extracted standard info from prmon json
[2026-01-10 13:40:32] 2026-01-10 18:39:20,905 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:40:32] 2026-01-10 18:39:20,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:40:32] 2026-01-10 18:39:20,919 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:40:32] 2026-01-10 18:39:20,920 | INFO     | sum of square deviations: 159345298994.76392
[2026-01-10 13:40:32] 2026-01-10 18:39:20,932 | INFO     | sum of deviations: 1475352923445.1235
[2026-01-10 13:40:32] 2026-01-10 18:39:20,933 | INFO     | mean x: 1768045923.8764045
[2026-01-10 13:40:32] 2026-01-10 18:39:20,933 | INFO     | mean y: 3414211.223470662
[2026-01-10 13:40:32] 2026-01-10 18:39:20,933 | INFO     | intersect: -16366643387.1623
[2026-01-10 13:40:32] 2026-01-10 18:39:20,934 | INFO     | chi2: 10.408871940880589
[2026-01-10 13:40:32] 2026-01-10 18:39:20,935 | INFO     | sum of square deviations: 156381323091.854
[2026-01-10 13:40:32] 2026-01-10 18:39:20,948 | INFO     | sum of deviations: 1801574387291.2256
[2026-01-10 13:40:32] 2026-01-10 18:39:20,948 | INFO     | mean x: 1768045771.419598
[2026-01-10 13:40:32] 2026-01-10 18:39:20,948 | INFO     | mean y: 3430987.3316582916
[2026-01-10 13:40:32] 2026-01-10 18:39:20,948 | INFO     | intersect: -20365152129.70188
[2026-01-10 13:40:32] 2026-01-10 18:39:20,949 | INFO     | chi2: 7.063622323159473
[2026-01-10 13:40:32] 2026-01-10 18:39:20,950 | INFO     | current chi2=7.063622323159473 (change=32.138445325499006 %)
[2026-01-10 13:40:32] 2026-01-10 18:39:20,951 | INFO     | sum of square deviations: 153454177449.62378
[2026-01-10 13:40:32] 2026-01-10 18:39:20,964 | INFO     | sum of deviations: 2070427174960.3372
[2026-01-10 13:40:32] 2026-01-10 18:39:20,964 | INFO     | mean x: 1768045618.9582806
[2026-01-10 13:40:32] 2026-01-10 18:39:20,964 | INFO     | mean y: 3444976.01011378
[2026-01-10 13:40:32] 2026-01-10 18:39:20,964 | INFO     | intersect: -23851296269.222557
[2026-01-10 13:40:32] 2026-01-10 18:39:20,965 | INFO     | chi2: 4.602074033326681
[2026-01-10 13:40:32] 2026-01-10 18:39:20,966 | INFO     | current chi2=4.602074033326681 (change=34.84824325561861 %)
[2026-01-10 13:40:32] 2026-01-10 18:39:20,966 | INFO     | sum of square deviations: 150562811171.82712
[2026-01-10 13:40:32] 2026-01-10 18:39:20,980 | INFO     | sum of deviations: 2154868416002.0732
[2026-01-10 13:40:32] 2026-01-10 18:39:20,980 | INFO     | mean x: 1768045466.470738
[2026-01-10 13:40:32] 2026-01-10 18:39:20,980 | INFO     | mean y: 3449422.872773537
[2026-01-10 13:40:32] 2026-01-10 18:39:20,980 | INFO     | intersect: -25300975382.30345
[2026-01-10 13:40:32] 2026-01-10 18:39:20,981 | INFO     | chi2: 4.209265173058894
[2026-01-10 13:40:32] 2026-01-10 18:39:20,981 | INFO     | current chi2=4.209265173058894 (change=8.535474601738192 %)
[2026-01-10 13:40:32] 2026-01-10 18:39:20,981 | INFO     | right removable region: 785
[2026-01-10 13:40:32] 2026-01-10 18:39:20,982 | INFO     | sum of square deviations: 156377963211.85416
[2026-01-10 13:40:32] 2026-01-10 18:39:20,997 | INFO     | sum of deviations: 1135412112927.8828
[2026-01-10 13:40:32] 2026-01-10 18:39:20,997 | INFO     | mean x: 1768046076.419598
[2026-01-10 13:40:32] 2026-01-10 18:39:20,997 | INFO     | mean y: 3431677.9434673367
[2026-01-10 13:40:32] 2026-01-10 18:39:20,997 | INFO     | intersect: -12833805041.02957
[2026-01-10 13:40:32] 2026-01-10 18:39:20,998 | INFO     | chi2: 7.138960838187494
[2026-01-10 13:40:32] 2026-01-10 18:39:20,998 | INFO     | current chi2=7.138960838187494 (change=31.41465397273839 %)
[2026-01-10 13:40:32] 2026-01-10 18:39:20,999 | INFO     | sum of square deviations: 153448425960.43958
[2026-01-10 13:40:32] 2026-01-10 18:39:21,013 | INFO     | sum of deviations: 994155575742.7869
[2026-01-10 13:40:32] 2026-01-10 18:39:21,013 | INFO     | mean x: 1768046228.94311
[2026-01-10 13:40:32] 2026-01-10 18:39:21,014 | INFO     | mean y: 3439019.2174462704
[2026-01-10 13:40:32] 2026-01-10 18:39:21,014 | INFO     | intersect: -11451308761.173313
[2026-01-10 13:40:32] 2026-01-10 18:39:21,015 | INFO     | chi2: 6.525263884037207
[2026-01-10 13:40:32] 2026-01-10 18:39:21,015 | INFO     | current chi2=6.525263884037207 (change=8.59644657059217 %)
[2026-01-10 13:40:32] 2026-01-10 18:39:21,015 | INFO     | left removable region: 20
[2026-01-10 13:40:32] 2026-01-10 18:39:21,016 | INFO     | sum of square deviations: 138811461755.57626
[2026-01-10 13:40:32] 2026-01-10 18:39:21,029 | INFO     | sum of deviations: 1525655619136.7612
[2026-01-10 13:40:32] 2026-01-10 18:39:21,029 | INFO     | mean x: 1768046046.0431373
[2026-01-10 13:40:32] 2026-01-10 18:39:21,029 | INFO     | mean y: 3483259.583006536
[2026-01-10 13:40:32] 2026-01-10 18:39:21,029 | INFO     | intersect: -19428841354.84953
[2026-01-10 13:40:32] 2026-01-10 18:39:21,030 | INFO     | chi2: 0.11906159797952826
[2026-01-10 13:40:32] 2026-01-10 18:39:21,030 | INFO     | current memory leak: 10.99 B/s (using 765 data points, chi2=0.12)
[2026-01-10 13:40:32] 2026-01-10 18:39:21,031 | INFO     | could have reported an average CPU frequency of 2646 MHz (30 samples)
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | ..............................
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . Timing measurements:
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . get job = 0 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . initial setup = 5 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . payload setup = 44 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . stage-in = 0 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . payload execution = 48828 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . stage-out = 8 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | . log creation = 0 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,032 | INFO     | ..............................
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | 
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | job summary report
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | --------------------------------------------------
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | PanDA job id: 6963379036
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | task id: 47962010
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | errors: (none)
[2026-01-10 13:40:32] 2026-01-10 18:39:21,121 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | pilot state: finished 
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | transexitcode: 0
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | exeerrorcode: 0
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | exeerrordiag: 
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | exitcode: 0
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | exitmsg: OK
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | cpuconsumptiontime: 281949 s
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | nevents: 900
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | neventsw: 0
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | pid: 1763471
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | pgrp: 1763471
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | corecount: 12
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | event service: False
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | sizes: {0: 2284395, 1: 2284479, 2: 2284678, 3: 2284678, 14: 2284706, 24: 2284734, 32: 2285152, 35: 2285180, 48879: 2332057, 48887: 2341051, 48891: 2341107, 48916: 
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | --------------------------------------------------
[2026-01-10 13:40:32] 2026-01-10 18:39:21,122 | INFO     | 
[2026-01-10 13:40:32] 2026-01-10 18:39:21,123 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 13:40:32] 2026-01-10 18:39:21,144 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,144 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,144 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,144 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:40:32] 2026-01-10 18:39:21,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,147 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:40:32] 2026-01-10 18:39:21,147 | INFO     | job 6963379036 has completed (purged errors)
[2026-01-10 13:40:32] 2026-01-10 18:39:21,147 | INFO     | overall cleanup function is called
[2026-01-10 13:40:32] 2026-01-10 18:39:22,164 | INFO     | --- collectZombieJob: --- 10, [1763471]
[2026-01-10 13:40:32] 2026-01-10 18:39:22,165 | INFO     | zombie collector waiting for pid 1763471
[2026-01-10 13:40:32] 2026-01-10 18:39:22,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:40:32] 2026-01-10 18:39:22,165 | INFO     | collected zombie processes
[2026-01-10 13:40:32] 2026-01-10 18:39:22,165 | INFO     | will attempt to kill all subprocesses of pid=1763471
[2026-01-10 13:40:32] 2026-01-10 18:39:23,800 | INFO     | process IDs to be killed: [1763471] (in reverse order)
[2026-01-10 13:40:32] 2026-01-10 18:39:24,636 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:40:32] 2026-01-10 18:39:24,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:40:32] 2026-01-10 18:39:24,703 | INFO     | did not find any defunct processes belonging to 1763471
[2026-01-10 13:40:32] 2026-01-10 18:39:24,804 | INFO     | did not find any defunct processes belonging to 1763471
[2026-01-10 13:40:32] 2026-01-10 18:39:24,804 | INFO     | ready for new job
[2026-01-10 13:40:32] 2026-01-10 18:39:24,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:40:32] 2026-01-10 18:39:24,829 | INFO     | ***************************************
[2026-01-10 13:40:32] 2026-01-10 18:39:24,829 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:40:32] 2026-01-10 18:39:24,829 | INFO     | ***************************************
[2026-01-10 13:40:32] 2026-01-10 18:39:24,829 | INFO     | 
[2026-01-10 13:40:32] 2026-01-10 18:39:24,853 | INFO     | architecture information:
[2026-01-10 13:40:32] 2026-01-10 18:39:24,862 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:40:32] 2026-01-10 18:39:24,982 | INFO     | cat /etc/os-release:
[2026-01-10 13:40:32] NAME="CentOS Linux"
[2026-01-10 13:40:32] VERSION="7 (Core)"
[2026-01-10 13:40:32] ID="centos"
[2026-01-10 13:40:32] ID_LIKE="rhel fedora"
[2026-01-10 13:40:32] VERSION_ID="7"
[2026-01-10 13:40:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:40:32] ANSI_COLOR="0;31"
[2026-01-10 13:40:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:40:32] HOME_URL="https://www.centos.org/"
[2026-01-10 13:40:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:40:32] 
[2026-01-10 13:40:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:40:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:40:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:40:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:40:32] 
[2026-01-10 13:40:32] 2026-01-10 18:39:24,982 | INFO     | ***************************************
[2026-01-10 13:40:32] 2026-01-10 18:39:25,486 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 13:40:32] 2026-01-10 18:39:25,535 | INFO     | sufficient remaining disk space (94284808192 B)
[2026-01-10 13:40:32] 2026-01-10 18:39:25,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:40:32] 2026-01-10 18:39:25,536 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:40:32] 2026-01-10 18:39:25,536 | INFO     | update_server=False
[2026-01-10 13:40:32] 2026-01-10 18:39:25,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:40:32] 2026-01-10 18:39:25,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:40:32] 2026-01-10 18:39:25,563 | INFO     | all data control threads have been joined
[2026-01-10 13:40:32] 2026-01-10 18:39:25,701 | INFO     | all payload control threads have been joined
[2026-01-10 13:40:32] 2026-01-10 18:39:26,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:40:32] 2026-01-10 18:39:26,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:40:32] 2026-01-10 18:39:26,433 | INFO     | aborting loop
[2026-01-10 13:40:32] 2026-01-10 18:39:26,542 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:26,567 | INFO     | all job control threads have been joined
[2026-01-10 13:40:32] 2026-01-10 18:39:26,569 | INFO     | [data] control thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:26,691 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:26,707 | INFO     | [payload] control thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:26,913 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,085 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,126 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,167 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,438 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,556 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,573 | INFO     | [job] control thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,628 | INFO     | [job] validate thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,772 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:27,965 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:28,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:40:32] 2026-01-10 18:39:32,764 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:40:32] 2026-01-10 18:39:56,117 | INFO     | PID=1751387 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:40:32] 2026-01-10 18:39:56,117 | INFO     | .. there are 20 such processes running
[2026-01-10 13:40:32] 2026-01-10 18:39:56,118 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:40:32] 2026-01-10 18:39:56,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:40:32] 2026-01-10 18:39:56,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:40:32] 2026-01-10 18:40:24,399 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:40:32] 2026-01-10 18:40:26,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680472471360)>', '<ExcThread(monitor, started 139679710045952)>']
[2026-01-10 13:40:32] 2026-01-10 18:40:27,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:40:32] 2026-01-10 18:40:27,302 | INFO     | [monitor] control thread has ended
[2026-01-10 13:40:32] 2026-01-10 18:40:31,409 | INFO     | all workflow threads have been joined
[2026-01-10 13:40:32] 2026-01-10 18:40:31,410 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:40:32] 2026-01-10 18:40:31,434 | INFO     | traces error code: 0
[2026-01-10 13:40:32] 2026-01-10 18:40:31,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:40:32] 2026-01-10 18:40:31,657 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:40:32] 2026-01-10 18:40:31,662 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:40:32] 2026-01-10 18:40:31,664 [wrapper] pilotpid: 1751387
[2026-01-10 13:40:32] 2026-01-10 18:40:31,666 [wrapper] Pilot exit status: 0
[2026-01-10 13:40:32] 2026-01-10 18:40:31,705 [wrapper] pandaids: 6963379036
[2026-01-10 13:40:32] 2026-01-10 18:40:31,793 [wrapper] cleanup supervisor_pilot 3454813 1751388
[2026-01-10 13:40:32] 2026-01-10 18:40:31,796 [wrapper] Test setup, not cleaning
[2026-01-10 13:40:32] 2026-01-10 18:40:31,798 [wrapper] apfmon messages muted
[2026-01-10 13:40:32] 2026-01-10 18:40:31,801 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:40:32] 2026-01-10 18:40:31,803 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:40:32]  *** Error codes and diagnostics ***
[2026-01-10 13:40:32]     "exeErrorCode": 0,
[2026-01-10 13:40:32]     "exeErrorDiag": "",
[2026-01-10 13:40:32]     "pilotErrorCode": 0,
[2026-01-10 13:40:32]     "pilotErrorDiag": "",
[2026-01-10 13:40:32]  *** Listing of results directory ***
[2026-01-10 13:40:32] total 1184480
[2026-01-10 13:40:32] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas       100 Jan 10 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:40:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 00:01 run_atlas
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas       105 Jan 10 00:01 job.xml
[2026-01-10 13:40:32] -rw-r--r--. 2 boincer umatlas 393896601 Jan 10 00:01 EVNT.47962006._000108.pool.root.1
[2026-01-10 13:40:32] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:01 start_atlas.sh
[2026-01-10 13:40:32] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 00:01 shared
[2026-01-10 13:40:32] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 00:01 input.tar.gz
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas         0 Jan 10 00:01 boinc_lockfile
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas      2892 Jan 10 00:01 pandaJob.out
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas        57 Jan 10 00:01 setup.sh.local
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas    989374 Jan 10 00:02 agis_schedconf.cvmfs.json
[2026-01-10 13:40:32] drwx------. 5 boincer umatlas      4096 Jan 10 00:02 pilot3
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas       533 Jan 10 13:22 boinc_task_state.xml
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas      6881 Jan 10 13:30 init_data.xml
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas 797897856 Jan 10 13:37 HITS.47962010._001326.pool.root.1
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas      1054 Jan 10 13:38 memory_monitor_summary.json
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:38 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas   2418825 Jan 10 13:38 log.47962010._001326.job.log.tgz.1
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas      8621 Jan 10 13:39 heartbeat.json
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas        95 Jan 10 13:39 pilot_heartbeat.json
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:40 boinc_mmap_file
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas        29 Jan 10 13:40 wrapper_checkpoint.txt
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas      4824 Jan 10 13:40 pilotlog.txt
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas   6175391 Jan 10 13:40 log.47962010._001326.job.log.1
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas       353 Jan 10 13:40 output.list
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:40 runtime_log
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas   8611840 Jan 10 13:40 result.tar.gz
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas      9355 Jan 10 13:40 runtime_log.err
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas       662 Jan 10 13:40 lVLKDmRvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXQhKDm5jZVVo.diag
[2026-01-10 13:40:32] -rw-r--r--. 1 boincer umatlas     21054 Jan 10 13:40 stderr.txt
[2026-01-10 13:40:32] HITS file was successfully produced:
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas 797897856 Jan 10 13:37 shared/HITS.pool.root.1
[2026-01-10 13:40:32]  *** Contents of shared directory: ***
[2026-01-10 13:40:32] total 1172884
[2026-01-10 13:40:32] -rw-r--r--. 2 boincer umatlas 393896601 Jan 10 00:01 ATLAS.root_0
[2026-01-10 13:40:32] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:01 start_atlas.sh
[2026-01-10 13:40:32] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 00:01 input.tar.gz
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas 797897856 Jan 10 13:37 HITS.pool.root.1
[2026-01-10 13:40:32] -rw-------. 1 boincer umatlas   8611840 Jan 10 13:40 result.tar.gz
13:40:33 (1747379): run_atlas exited; CPU time 283089.272644
13:40:33 (1747379): called boinc_finish(0)

</stderr_txt>
]]>

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