Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:22:37 (638372): wrapper (7.7.26015): starting
17:22:37 (638372): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:22:37] Arguments: --nthreads 8
[2026-01-09 17:22:37] Threads: 8
[2026-01-09 17:22:37] Checking for CVMFS
[2026-01-09 17:22:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:22:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:22:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:22:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:22:39] 2.13.3.0 12388 93958 211844 154959 2 59 32829992 32935936 17781 16776704 0 414912185 99.473 552482660 38101 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 17:22:39] CVMFS is ok
[2026-01-09 17:22:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:22:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:22:39] Further information can be found at the LHC@home message board.
[2026-01-09 17:22:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:22:39] Checking for apptainer binary...
[2026-01-09 17:22:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:22:39] Running /usr/bin/apptainer --version
[2026-01-09 17:22:39] apptainer version 1.4.5-2.el9
[2026-01-09 17:22:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:22:40] c7-4-31.aglt2.org
[2026-01-09 17:22:40] apptainer works
[2026-01-09 17:22:40] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:22:40] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:22:40] Starting ATLAS job with PandaID=6963169981
[2026-01-09 17:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:41:30]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:41:30] 2026-01-10 05:40:32,293 | INFO     | time since job start (26212s) is within the limit (349056.0s)
[2026-01-10 00:41:30] 2026-01-10 05:40:32,841 | INFO     | monitor loop #1721: job 0:6963169981 is in state 'finished'
[2026-01-10 00:41:30] 2026-01-10 05:40:32,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,206 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:41:30] 2026-01-10 05:40:34,211 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3203.3350520833324
[2026-01-10 00:41:30] 2026-01-10 05:40:34,224 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963169981/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,224 | INFO     | extracted standard info from prmon json
[2026-01-10 00:41:30] 2026-01-10 05:40:34,224 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:41:30] 2026-01-10 05:40:34,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:41:30] 2026-01-10 05:40:34,230 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:41:30] 2026-01-10 05:40:34,230 | INFO     | sum of square deviations: 24303681951.072403
[2026-01-10 00:41:30] 2026-01-10 05:40:34,233 | INFO     | sum of deviations: 438678698761.3787
[2026-01-10 00:41:30] 2026-01-10 05:40:34,234 | INFO     | mean x: 1768010583.9042056
[2026-01-10 00:41:30] 2026-01-10 05:40:34,234 | INFO     | mean y: 2758133.7897196263
[2026-01-10 00:41:30] 2026-01-10 05:40:34,234 | INFO     | intersect: -31909632091.890438
[2026-01-10 00:41:30] 2026-01-10 05:40:34,234 | INFO     | chi2: 8.934518709783728
[2026-01-10 00:41:30] 2026-01-10 05:40:34,234 | INFO     | sum of square deviations: 23461877651.82978
[2026-01-10 00:41:30] 2026-01-10 05:40:34,238 | INFO     | sum of deviations: 536007625443.3401
[2026-01-10 00:41:30] 2026-01-10 05:40:34,238 | INFO     | mean x: 1768010431.432624
[2026-01-10 00:41:30] 2026-01-10 05:40:34,238 | INFO     | mean y: 2775711.8014184395
[2026-01-10 00:41:30] 2026-01-10 05:40:34,238 | INFO     | intersect: -40389007383.07581
[2026-01-10 00:41:30] 2026-01-10 05:40:34,238 | INFO     | chi2: 7.051676233811523
[2026-01-10 00:41:30] 2026-01-10 05:40:34,238 | INFO     | current chi2=7.051676233811523 (change=21.07379856858324 %)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,239 | INFO     | right removable region: 422
[2026-01-10 00:41:30] 2026-01-10 05:40:34,239 | INFO     | sum of square deviations: 23461249961.829784
[2026-01-10 00:41:30] 2026-01-10 05:40:34,242 | INFO     | sum of deviations: 277408541143.1698
[2026-01-10 00:41:30] 2026-01-10 05:40:34,242 | INFO     | mean x: 1768010736.432624
[2026-01-10 00:41:30] 2026-01-10 05:40:34,242 | INFO     | mean y: 2787318.5673758867
[2026-01-10 00:41:30] 2026-01-10 05:40:34,242 | INFO     | intersect: -20902376725.001923
[2026-01-10 00:41:30] 2026-01-10 05:40:34,243 | INFO     | chi2: 4.717079888257171
[2026-01-10 00:41:30] 2026-01-10 05:40:34,243 | INFO     | current chi2=4.717079888257171 (change=47.20387251423245 %)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,243 | INFO     | sum of square deviations: 22638492759.38747
[2026-01-10 00:41:30] 2026-01-10 05:40:34,247 | INFO     | sum of deviations: 149961912130.15793
[2026-01-10 00:41:30] 2026-01-10 05:40:34,247 | INFO     | mean x: 1768010888.9617224
[2026-01-10 00:41:30] 2026-01-10 05:40:34,247 | INFO     | mean y: 2810927.447368421
[2026-01-10 00:41:30] 2026-01-10 05:40:34,247 | INFO     | intersect: -11708847458.718704
[2026-01-10 00:41:30] 2026-01-10 05:40:34,247 | INFO     | chi2: 2.1904811913442255
[2026-01-10 00:41:30] 2026-01-10 05:40:34,247 | INFO     | current chi2=2.1904811913442255 (change=53.56277096774914 %)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,248 | INFO     | sum of square deviations: 21835508050.59074
[2026-01-10 00:41:30] 2026-01-10 05:40:34,251 | INFO     | sum of deviations: 126870350471.50108
[2026-01-10 00:41:30] 2026-01-10 05:40:34,251 | INFO     | mean x: 1768011041.4600484
[2026-01-10 00:41:30] 2026-01-10 05:40:34,251 | INFO     | mean y: 2815309.9394673123
[2026-01-10 00:41:30] 2026-01-10 05:40:34,251 | INFO     | intersect: -10269818601.202873
[2026-01-10 00:41:30] 2026-01-10 05:40:34,251 | INFO     | chi2: 2.1450734649531853
[2026-01-10 00:41:30] 2026-01-10 05:40:34,252 | INFO     | current chi2=2.1450734649531853 (change=2.07295668962923 %)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,252 | INFO     | left removable region: 30
[2026-01-10 00:41:30] 2026-01-10 05:40:34,252 | INFO     | sum of square deviations: 18670790976.979668
[2026-01-10 00:41:30] 2026-01-10 05:40:34,255 | INFO     | sum of deviations: 196787187830.6124
[2026-01-10 00:41:30] 2026-01-10 05:40:34,255 | INFO     | mean x: 1768011315.9489796
[2026-01-10 00:41:30] 2026-01-10 05:40:34,255 | INFO     | mean y: 2843386.7806122447
[2026-01-10 00:41:30] 2026-01-10 05:40:34,255 | INFO     | intersect: -18631716624.483707
[2026-01-10 00:41:30] 2026-01-10 05:40:34,255 | INFO     | chi2: 0.08356802400331317
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | current memory leak: 10.54 B/s (using 392 data points, chi2=0.08)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | could have reported an average CPU frequency of 3220 MHz (18 samples)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | ..............................
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | . Timing measurements:
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | . get job = 0 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | . initial setup = 6 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | . payload setup = 49 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,256 | INFO     | . stage-in = 0 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,257 | INFO     | . payload execution = 26084 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,257 | INFO     | . stage-out = 2 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,257 | INFO     | . log creation = 0 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,257 | INFO     | ..............................
[2026-01-10 00:41:30] 2026-01-10 05:40:34,303 | INFO     | time since job start (26214s) is within the limit (349056.0s)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,324 | INFO     | 
[2026-01-10 00:41:30] 2026-01-10 05:40:34,324 | INFO     | job summary report
[2026-01-10 00:41:30] 2026-01-10 05:40:34,324 | INFO     | --------------------------------------------------
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | PanDA job id: 6963169981
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | task id: 47962010
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | errors: (none)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | pilot state: finished 
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | transexitcode: 0
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | exeerrorcode: 0
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | exeerrordiag: 
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | exitcode: 0
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | exitmsg: OK
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | cpuconsumptiontime: 98362 s
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | nevents: 450
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | neventsw: 0
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | pid: 654728
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | pgrp: 654728
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | corecount: 8
[2026-01-10 00:41:30] 2026-01-10 05:40:34,325 | INFO     | event service: False
[2026-01-10 00:41:30] 2026-01-10 05:40:34,326 | INFO     | sizes: {0: 2283792, 1: 2284477, 2: 2284676, 13: 2284676, 24: 2284732, 30: 2285022, 35: 2285178, 26138: 2322710, 26142: 2331704, 26144: 2331760, 26154: 2332006}
[2026-01-10 00:41:30] 2026-01-10 05:40:34,326 | INFO     | --------------------------------------------------
[2026-01-10 00:41:30] 2026-01-10 05:40:34,326 | INFO     | 
[2026-01-10 00:41:30] 2026-01-10 05:40:34,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 00:41:30] 2026-01-10 05:40:34,343 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,343 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,343 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,343 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,344 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:41:30] 2026-01-10 05:40:34,345 | INFO     | job 6963169981 has completed (purged errors)
[2026-01-10 00:41:30] 2026-01-10 05:40:34,345 | INFO     | overall cleanup function is called
[2026-01-10 00:41:30] 2026-01-10 05:40:35,360 | INFO     | --- collectZombieJob: --- 10, [654728]
[2026-01-10 00:41:30] 2026-01-10 05:40:35,361 | INFO     | zombie collector waiting for pid 654728
[2026-01-10 00:41:30] 2026-01-10 05:40:35,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:41:30] 2026-01-10 05:40:35,361 | INFO     | collected zombie processes
[2026-01-10 00:41:30] 2026-01-10 05:40:35,361 | INFO     | will attempt to kill all subprocesses of pid=654728
[2026-01-10 00:41:30] 2026-01-10 05:40:35,806 | INFO     | process IDs to be killed: [654728] (in reverse order)
[2026-01-10 00:41:30] 2026-01-10 05:40:35,973 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:41:30] 2026-01-10 05:40:35,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:41:30] 2026-01-10 05:40:35,997 | INFO     | did not find any defunct processes belonging to 654728
[2026-01-10 00:41:30] 2026-01-10 05:40:36,011 | INFO     | did not find any defunct processes belonging to 654728
[2026-01-10 00:41:30] 2026-01-10 05:40:36,011 | INFO     | ready for new job
[2026-01-10 00:41:30] 2026-01-10 05:40:36,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:41:30] 2026-01-10 05:40:36,014 | INFO     | ***************************************
[2026-01-10 00:41:30] 2026-01-10 05:40:36,014 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:41:30] 2026-01-10 05:40:36,014 | INFO     | ***************************************
[2026-01-10 00:41:30] 2026-01-10 05:40:36,014 | INFO     | 
[2026-01-10 00:41:30] 2026-01-10 05:40:36,018 | INFO     | architecture information:
[2026-01-10 00:41:30] 2026-01-10 05:40:36,019 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:41:30] 2026-01-10 05:40:36,034 | INFO     | cat /etc/os-release:
[2026-01-10 00:41:30] NAME="CentOS Linux"
[2026-01-10 00:41:30] VERSION="7 (Core)"
[2026-01-10 00:41:30] ID="centos"
[2026-01-10 00:41:30] ID_LIKE="rhel fedora"
[2026-01-10 00:41:30] VERSION_ID="7"
[2026-01-10 00:41:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:41:30] ANSI_COLOR="0;31"
[2026-01-10 00:41:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:41:30] HOME_URL="https://www.centos.org/"
[2026-01-10 00:41:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:41:30] 
[2026-01-10 00:41:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:41:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:41:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:41:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:41:30] 
[2026-01-10 00:41:30] 2026-01-10 05:40:36,034 | INFO     | ***************************************
[2026-01-10 00:41:30] 2026-01-10 05:40:36,535 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 00:41:30] 2026-01-10 05:40:36,549 | INFO     | sufficient remaining disk space (76043780096 B)
[2026-01-10 00:41:30] 2026-01-10 05:40:36,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:41:30] 2026-01-10 05:40:36,550 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:41:30] 2026-01-10 05:40:36,550 | INFO     | update_server=False
[2026-01-10 00:41:30] 2026-01-10 05:40:36,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:41:30] 2026-01-10 05:40:36,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:41:30] 2026-01-10 05:40:36,550 | INFO     | aborting loop
[2026-01-10 00:41:30] 2026-01-10 05:40:36,594 | INFO     | all job control threads have been joined
[2026-01-10 00:41:30] 2026-01-10 05:40:37,221 | INFO     | all data control threads have been joined
[2026-01-10 00:41:30] 2026-01-10 05:40:37,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:41:30] 2026-01-10 05:40:37,550 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:37,554 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:37,600 | INFO     | [job] control thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:37,613 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:37,657 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:37,874 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:37,940 | INFO     | all payload control threads have been joined
[2026-01-10 00:41:30] 2026-01-10 05:40:38,223 | INFO     | [data] control thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:38,303 | INFO     | [job] validate thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:38,644 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:38,889 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:38,947 | INFO     | [payload] control thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:38,978 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:39,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:41:30] 2026-01-10 05:40:39,029 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:39,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:41:30] 2026-01-10 05:40:39,514 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:40,343 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:40:43,012 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:41:30] 2026-01-10 05:41:07,956 | INFO     | PID=643449 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 00:41:30] 2026-01-10 05:41:07,956 | INFO     | .. there are 13 such processes running
[2026-01-10 00:41:30] 2026-01-10 05:41:07,959 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:41:30] 2026-01-10 05:41:07,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:41:30] 2026-01-10 05:41:07,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:41:30] 2026-01-10 05:41:23,786 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:41:30] 2026-01-10 05:41:24,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457244202816)>', '<ExcThread(monitor, started 140456595793664)>']
[2026-01-10 00:41:30] 2026-01-10 05:41:25,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:41:30] 2026-01-10 05:41:25,063 | INFO     | [monitor] control thread has ended
[2026-01-10 00:41:30] 2026-01-10 05:41:29,274 | INFO     | all workflow threads have been joined
[2026-01-10 00:41:30] 2026-01-10 05:41:29,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:41:30] 2026-01-10 05:41:29,290 | INFO     | traces error code: 0
[2026-01-10 00:41:30] 2026-01-10 05:41:29,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:41:30] 2026-01-10 05:41:29,546 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:41:30] 2026-01-10 05:41:29,581 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:41:30] 2026-01-10 05:41:29,607 [wrapper] pilotpid: 643449
[2026-01-10 00:41:30] 2026-01-10 05:41:29,638 [wrapper] Pilot exit status: 0
[2026-01-10 00:41:30] 2026-01-10 05:41:29,746 [wrapper] pandaids: 6963169981
[2026-01-10 00:41:30] 2026-01-10 05:41:29,961 [wrapper] cleanup supervisor_pilot 1700206 643450
[2026-01-10 00:41:30] 2026-01-10 05:41:29,964 [wrapper] Test setup, not cleaning
[2026-01-10 00:41:30] 2026-01-10 05:41:29,981 [wrapper] apfmon messages muted
[2026-01-10 00:41:30] 2026-01-10 05:41:29,984 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:41:30] 2026-01-10 05:41:29,986 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:41:30]  *** Error codes and diagnostics ***
[2026-01-10 00:41:30]     "exeErrorCode": 0,
[2026-01-10 00:41:30]     "exeErrorDiag": "",
[2026-01-10 00:41:30]     "pilotErrorCode": 0,
[2026-01-10 00:41:30]     "pilotErrorDiag": "",
[2026-01-10 00:41:30]  *** Listing of results directory ***
[2026-01-10 00:41:30] total 773144
[2026-01-10 00:41:30] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:41:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:22 run_atlas
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:22 job.xml
[2026-01-10 00:41:30] -rw-r--r--. 2 boincer umatlas 390768179 Jan  9 17:22 EVNT.47962006._000052.pool.root.1
[2026-01-10 00:41:30] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:22 start_atlas.sh
[2026-01-10 00:41:30] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:22 shared
[2026-01-10 00:41:30] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 17:22 input.tar.gz
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:22 boinc_lockfile
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 17:22 pandaJob.out
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas        57 Jan  9 17:22 setup.sh.local
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas    989375 Jan  9 17:23 agis_schedconf.cvmfs.json
[2026-01-10 00:41:30] drwx------. 5 boincer umatlas      4096 Jan  9 17:23 pilot3
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas       532 Jan 10 00:33 boinc_task_state.xml
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 00:36 init_data.xml
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas 386846696 Jan 10 00:39 HITS.47962010._000481.pool.root.1
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas      1049 Jan 10 00:40 memory_monitor_summary.json
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas   1578399 Jan 10 00:40 log.47962010._000481.job.log.tgz.1
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas      8575 Jan 10 00:40 heartbeat.json
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas        95 Jan 10 00:41 pilot_heartbeat.json
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:41 boinc_mmap_file
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:41 wrapper_checkpoint.txt
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas      4823 Jan 10 00:41 pilotlog.txt
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas   3505891 Jan 10 00:41 log.47962010._000481.job.log.1
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas       353 Jan 10 00:41 output.list
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:41 runtime_log
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas   5099520 Jan 10 00:41 result.tar.gz
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas       661 Jan 10 00:41 TqaMDm3uLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYZmKDmqIdUWo.diag
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 00:41 runtime_log.err
[2026-01-10 00:41:30] -rw-r--r--. 1 boincer umatlas     21268 Jan 10 00:41 stderr.txt
[2026-01-10 00:41:30] HITS file was successfully produced:
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas 386846696 Jan 10 00:39 shared/HITS.pool.root.1
[2026-01-10 00:41:30]  *** Contents of shared directory: ***
[2026-01-10 00:41:30] total 764976
[2026-01-10 00:41:30] -rw-r--r--. 2 boincer umatlas 390768179 Jan  9 17:22 ATLAS.root_0
[2026-01-10 00:41:30] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:22 start_atlas.sh
[2026-01-10 00:41:30] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 17:22 input.tar.gz
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas 386846696 Jan 10 00:39 HITS.pool.root.1
[2026-01-10 00:41:30] -rw-------. 1 boincer umatlas   5099520 Jan 10 00:41 result.tar.gz
00:41:31 (638372): run_atlas exited; CPU time 98526.113026
00:41:31 (638372): called boinc_finish(0)

</stderr_txt>
]]>

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