Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:09:12 (14004): wrapper (7.7.26015): starting
04:09:12 (14004): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:09:12] Arguments: --nthreads 8
[2026-01-10 04:09:12] Threads: 8
[2026-01-10 04:09:12] Checking for CVMFS
[2026-01-10 04:09:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:09:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:09:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:09:14] 2.11.0.0 4712 52936 81120 154965 3 49 3410618 4096000 3772 130560 1 2195751 99.044 4406665 629 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 04:09:14] CVMFS is ok
[2026-01-10 04:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:09:14] Further information can be found at the LHC@home message board.
[2026-01-10 04:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:09:14] Checking for apptainer binary...
[2026-01-10 04:09:14] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 04:09:14] apptainer is not installed, using version from CVMFS
[2026-01-10 04:09:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:09:14] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009994/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node041
[2026-01-10 04:09:14] apptainer works
[2026-01-10 04:09:14] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:09:14] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:09:14] Starting ATLAS job with PandaID=6963381533
[2026-01-10 04:09:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11009994/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:07:54]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:07:54] 2026-01-10 08:07:02,856 | INFO     | time since job start (17863s) is within the limit (349056.0s)
[2026-01-10 09:07:54] 2026-01-10 08:07:03,341 | INFO     | monitor loop #1307: job 0:6963381533 is in state 'finished'
[2026-01-10 09:07:54] 2026-01-10 08:07:03,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:07:54] 2026-01-10 08:07:04,416 | INFO     | job 6963381533 has state=finished
[2026-01-10 09:07:54] 2026-01-10 08:07:04,416 | INFO     | preparing for final server update for job 6963381533 in state='finished'
[2026-01-10 09:07:54] 2026-01-10 08:07:04,417 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:07:54] 2026-01-10 08:07:04,417 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:07:54] 2026-01-10 08:07:04,417 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:07:54] 2026-01-10 08:07:04,417 | INFO     | job 6963381533 has finished - writing final server update
[2026-01-10 09:07:54] 2026-01-10 08:07:04,417 | INFO     | total number of processed events: 900 (read)
[2026-01-10 09:07:54] 2026-01-10 08:07:04,417 | INFO     | executing command: lscpu
[2026-01-10 09:07:54] 2026-01-10 08:07:04,447 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:07:54] 2026-01-10 08:07:04,861 | INFO     | time since job start (17865s) is within the limit (349056.0s)
[2026-01-10 09:07:54] 2026-01-10 08:07:05,844 | INFO     | monitor loop #1308: job 0:6963381533 is in state 'finished'
[2026-01-10 09:07:54] 2026-01-10 08:07:05,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:07:54] 2026-01-10 08:07:05,984 | INFO     | PID=18854 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:07:54] 2026-01-10 08:07:06,081 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:07:54] 2026-01-10 08:07:06,085 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2365.237671875
[2026-01-10 09:07:54] 2026-01-10 08:07:06,090 | INFO     | using path: /tmp/job_11009994/atlas/pilot/slots/0/PanDA_Pilot-6963381533/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,091 | INFO     | extracted standard info from prmon json
[2026-01-10 09:07:54] 2026-01-10 08:07:06,091 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:07:54] 2026-01-10 08:07:06,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:07:54] 2026-01-10 08:07:06,093 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:07:54] 2026-01-10 08:07:06,094 | INFO     | sum of square deviations: 7799669962.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,095 | INFO     | sum of deviations: 815460607967.9998
[2026-01-10 09:07:54] 2026-01-10 08:07:06,095 | INFO     | mean x: 1768023483.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,095 | INFO     | mean y: 3206538.300341297
[2026-01-10 09:07:54] 2026-01-10 08:07:06,095 | INFO     | intersect: -184844807720.39328
[2026-01-10 09:07:54] 2026-01-10 08:07:06,095 | INFO     | chi2: 6.773997740862471
[2026-01-10 09:07:54] 2026-01-10 08:07:06,095 | INFO     | sum of square deviations: 7407141672.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,096 | INFO     | sum of deviations: 841515215979.5001
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | mean x: 1768023330.5
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | mean y: 3216389.392361111
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | intersect: -200859491616.67407
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | chi2: 5.3569470802793955
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | current chi2=5.3569470802793955 (change=20.918971555527204 %)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | right removable region: 287
[2026-01-10 09:07:54] 2026-01-10 08:07:06,097 | INFO     | sum of square deviations: 7407141672.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,098 | INFO     | sum of deviations: 748718650457.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,098 | INFO     | mean x: 1768023635.5
[2026-01-10 09:07:54] 2026-01-10 08:07:06,098 | INFO     | mean y: 3232330.597222222
[2026-01-10 09:07:54] 2026-01-10 08:07:06,098 | INFO     | intersect: -178709735365.3768
[2026-01-10 09:07:54] 2026-01-10 08:07:06,098 | INFO     | chi2: 5.500151410069953
[2026-01-10 09:07:54] 2026-01-10 08:07:06,098 | INFO     | current chi2=5.500151410069953 (change=18.80494177180418 %)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,099 | INFO     | left removable region: 10
[2026-01-10 09:07:54] 2026-01-10 08:07:06,099 | INFO     | sum of square deviations: 6590404498.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | sum of deviations: 728424109911.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | mean x: 1768023605.0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | mean y: 3246541.548736462
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | intersect: -195412834696.6506
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | chi2: 3.9116515645096315
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | current memory leak: 110.53 B/s (using 277 data points, chi2=3.91)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | could have reported an average CPU frequency of 2768 MHz (13 samples)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | ..............................
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | . Timing measurements:
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | . get job = 0 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | . initial setup = 1 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,100 | INFO     | . payload setup = 2 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,101 | INFO     | . stage-in = 0 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,101 | INFO     | . payload execution = 17840 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,101 | INFO     | . stage-out = 1 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,101 | INFO     | . log creation = 0 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,101 | INFO     | ..............................
[2026-01-10 09:07:54] 2026-01-10 08:07:06,430 | INFO     | 
[2026-01-10 09:07:54] 2026-01-10 08:07:06,430 | INFO     | job summary report
[2026-01-10 09:07:54] 2026-01-10 08:07:06,430 | INFO     | --------------------------------------------------
[2026-01-10 09:07:54] 2026-01-10 08:07:06,430 | INFO     | PanDA job id: 6963381533
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | task id: 47962010
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | errors: (none)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | pilot state: finished 
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | transexitcode: 0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | exeerrorcode: 0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | exeerrordiag: 
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | exitcode: 0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | exitmsg: OK
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | cpuconsumptiontime: 136036 s
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | nevents: 900
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | neventsw: 0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | pid: 27062
[2026-01-10 09:07:54] 2026-01-10 08:07:06,431 | INFO     | pgrp: 27062
[2026-01-10 09:07:54] 2026-01-10 08:07:06,432 | INFO     | corecount: 8
[2026-01-10 09:07:54] 2026-01-10 08:07:06,432 | INFO     | event service: False
[2026-01-10 09:07:54] 2026-01-10 08:07:06,432 | INFO     | sizes: {0: 2286805, 1: 2287115, 3: 2287409, 11: 2287437, 17846: 2321167, 17847: 2329079, 17850: 2329263, 17854: 2329509}
[2026-01-10 09:07:54] 2026-01-10 08:07:06,432 | INFO     | --------------------------------------------------
[2026-01-10 09:07:54] 2026-01-10 08:07:06,432 | INFO     | 
[2026-01-10 09:07:54] 2026-01-10 08:07:06,432 | INFO     | executing command: ls -lF /tmp/job_11009994/atlas/pilot/slots/0
[2026-01-10 09:07:54] 2026-01-10 08:07:06,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,440 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,440 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,440 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | job 6963381533 has completed (purged errors)
[2026-01-10 09:07:54] 2026-01-10 08:07:06,441 | INFO     | overall cleanup function is called
[2026-01-10 09:07:54] 2026-01-10 08:07:07,449 | INFO     | --- collectZombieJob: --- 10, [27062]
[2026-01-10 09:07:54] 2026-01-10 08:07:07,449 | INFO     | zombie collector waiting for pid 27062
[2026-01-10 09:07:54] 2026-01-10 08:07:07,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:07:54] 2026-01-10 08:07:07,449 | INFO     | collected zombie processes
[2026-01-10 09:07:54] 2026-01-10 08:07:07,449 | INFO     | will attempt to kill all subprocesses of pid=27062
[2026-01-10 09:07:54] 2026-01-10 08:07:07,535 | INFO     | process IDs to be killed: [27062] (in reverse order)
[2026-01-10 09:07:54] 2026-01-10 08:07:07,562 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:07:54] 2026-01-10 08:07:07,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:07:54] 2026-01-10 08:07:07,565 | INFO     | did not find any defunct processes belonging to 27062
[2026-01-10 09:07:54] 2026-01-10 08:07:07,568 | INFO     | did not find any defunct processes belonging to 27062
[2026-01-10 09:07:54] 2026-01-10 08:07:07,568 | INFO     | ready for new job
[2026-01-10 09:07:54] 2026-01-10 08:07:07,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:07:54] 2026-01-10 08:07:07,569 | INFO     | ***************************************
[2026-01-10 09:07:54] 2026-01-10 08:07:07,569 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:07:54] 2026-01-10 08:07:07,569 | INFO     | ***************************************
[2026-01-10 09:07:54] 2026-01-10 08:07:07,569 | INFO     | 
[2026-01-10 09:07:54] 2026-01-10 08:07:07,583 | INFO     | architecture information:
[2026-01-10 09:07:54] 2026-01-10 08:07:07,584 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:07:54] 2026-01-10 08:07:07,589 | INFO     | cat /etc/os-release:
[2026-01-10 09:07:54] NAME="CentOS Linux"
[2026-01-10 09:07:54] VERSION="7 (Core)"
[2026-01-10 09:07:54] ID="centos"
[2026-01-10 09:07:54] ID_LIKE="rhel fedora"
[2026-01-10 09:07:54] VERSION_ID="7"
[2026-01-10 09:07:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:07:54] ANSI_COLOR="0;31"
[2026-01-10 09:07:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:07:54] HOME_URL="https://www.centos.org/"
[2026-01-10 09:07:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:07:54] 
[2026-01-10 09:07:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:07:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:07:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:07:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:07:54] 
[2026-01-10 09:07:54] 2026-01-10 08:07:07,589 | INFO     | ***************************************
[2026-01-10 09:07:54] 2026-01-10 08:07:08,092 | INFO     | executing command: df -mP /tmp/job_11009994/atlas/pilot/slots/0
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | INFO     | sufficient remaining disk space (225589592064 B)
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | INFO     | update_server=False
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:07:54] 2026-01-10 08:07:08,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:07:54] 2026-01-10 08:07:08,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:07:54] 2026-01-10 08:07:08,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:07:54] 2026-01-10 08:07:08,347 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:07:54] 2026-01-10 08:07:08,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:07:54] 2026-01-10 08:07:08,347 | INFO     | will abort loop
[2026-01-10 09:07:54] 2026-01-10 08:07:08,865 | INFO     | all payload control threads have been joined
[2026-01-10 09:07:54] 2026-01-10 08:07:09,035 | INFO     | all data control threads have been joined
[2026-01-10 09:07:54] 2026-01-10 08:07:09,103 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:09,103 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:09,185 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:09,352 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:09,479 | INFO     | all job control threads have been joined
[2026-01-10 09:07:54] 2026-01-10 08:07:09,517 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:09,814 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:09,870 | INFO     | [payload] control thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,006 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,040 | INFO     | [data] control thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,104 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,275 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,297 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,480 | INFO     | [job] validate thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:10,484 | INFO     | [job] control thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:12,178 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:18,972 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:07:54] 2026-01-10 08:07:19,977 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:07:54] 2026-01-10 08:07:38,155 | INFO     | PID=18854 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:07:54] 2026-01-10 08:07:38,156 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:07:54] 2026-01-10 08:07:38,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:07:54] 2026-01-10 08:07:38,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:07:54] 2026-01-10 08:07:48,795 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:07:54] 2026-01-10 08:07:49,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067122944)>']
[2026-01-10 09:07:54] 2026-01-10 08:07:49,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:07:54] 2026-01-10 08:07:49,211 | INFO     | [monitor] control thread has ended
[2026-01-10 09:07:54] 2026-01-10 08:07:54,052 | INFO     | all workflow threads have been joined
[2026-01-10 09:07:54] 2026-01-10 08:07:54,052 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:07:54] 2026-01-10 08:07:54,052 | INFO     | traces error code: 0
[2026-01-10 09:07:54] 2026-01-10 08:07:54,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:07:54] 2026-01-10 08:07:54,106 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:07:54] 2026-01-10 08:07:54,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:07:54] 2026-01-10 08:07:54,109 [wrapper] pilotpid: 18854
[2026-01-10 09:07:54] 2026-01-10 08:07:54,110 [wrapper] Pilot exit status: 0
[2026-01-10 09:07:54] 2026-01-10 08:07:54,114 [wrapper] pandaids: 6963381533
[2026-01-10 09:07:54] 2026-01-10 08:07:54,135 [wrapper] cleanup supervisor_pilot 25095 18855
[2026-01-10 09:07:54] 2026-01-10 08:07:54,136 [wrapper] Test setup, not cleaning
[2026-01-10 09:07:54] 2026-01-10 08:07:54,137 [wrapper] apfmon messages muted
[2026-01-10 09:07:54] 2026-01-10 08:07:54,139 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:07:54] 2026-01-10 08:07:54,140 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:07:54]  *** Error codes and diagnostics ***
[2026-01-10 09:07:54]     "exeErrorCode": 0,
[2026-01-10 09:07:54]     "exeErrorDiag": "",
[2026-01-10 09:07:54]     "pilotErrorCode": 0,
[2026-01-10 09:07:54]     "pilotErrorDiag": "",
[2026-01-10 09:07:54]  *** Listing of results directory ***
[2026-01-10 09:07:54] total 1572880
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 09:07:54] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:15 runpilot2-wrapper.sh
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:16 queuedata.json
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user       100 Jan 10 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:07:54] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 00:49 run_atlas
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user       105 Jan 10 00:49 job.xml
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user 392111621 Jan 10 02:29 EVNT.47962006._000111.pool.root.1
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user     15897 Jan 10 04:09 start_atlas.sh
[2026-01-10 09:07:54] drwxrwx--x 2 mf493845 unix-user       120 Jan 10 04:09 shared
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user    592706 Jan 10 04:09 input.tar.gz
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      6390 Jan 10 04:09 init_data.xml
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user 392102156 Jan 10 04:09 EVNT.47962006._000112.pool.root.1
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user         0 Jan 10 04:09 boinc_setup_complete
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      8192 Jan 10 04:09 boinc_mmap_file
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user         0 Jan 10 04:09 boinc_lockfile
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      3423 Jan 10 04:09 pandaJob.out
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user    989382 Jan 10 04:09 agis_schedconf.cvmfs.json
[2026-01-10 09:07:54] drwx------ 5 mf493845 unix-user       440 Jan 10 04:09 pilot3
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user 814281711 Jan 10 09:06 HITS.47962010._001643.pool.root.1
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      1031 Jan 10 09:06 memory_monitor_summary.json
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user   1516240 Jan 10 09:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user   1563809 Jan 10 09:06 log.47962010._001643.job.log.tgz.1
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      8775 Jan 10 09:07 heartbeat.json
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user        95 Jan 10 09:07 pilot_heartbeat.json
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      5018 Jan 10 09:07 pilotlog.txt
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user   2557336 Jan 10 09:07 log.47962010._001643.job.log.1
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user       353 Jan 10 09:07 output.list
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user       620 Jan 10 09:07 runtime_log
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user   4136960 Jan 10 09:07 result.tar.gz
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user      9273 Jan 10 09:07 runtime_log.err
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user       651 Jan 10 09:07 5jHODmKtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiXmKDm4WgE7n.diag
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user     22105 Jan 10 09:07 stderr.txt
[2026-01-10 09:07:54] HITS file was successfully produced:
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user 814281711 Jan 10 09:06 shared/HITS.pool.root.1
[2026-01-10 09:07:54]  *** Contents of shared directory: ***
[2026-01-10 09:07:54] total 1565676
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user 392111621 Jan 10 02:29 ATLAS.root_0
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user     15897 Jan 10 04:09 start_atlas.sh
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user    592706 Jan 10 04:09 input.tar.gz
[2026-01-10 09:07:54] -rw-r--r-- 2 mf493845 unix-user 392102156 Jan 10 04:09 ATLAS.root_1
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user 814281711 Jan 10 09:06 HITS.pool.root.1
[2026-01-10 09:07:54] -rw------- 1 mf493845 unix-user   4136960 Jan 10 09:07 result.tar.gz
09:07:55 (14004): run_atlas exited; CPU time 136206.809257
09:07:55 (14004): called boinc_finish(0)

</stderr_txt>
]]>

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