Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:03:06 (2064058): wrapper (7.7.26015): starting
17:03:06 (2064058): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:03:06] Arguments: --nthreads 8
[2026-01-09 17:03:06] Threads: 8
[2026-01-09 17:03:06] Checking for CVMFS
[2026-01-09 17:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:03:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:03:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:03:08] 2.13.3.0 6248 14558 144116 154957 2 122 37209784 40960001 16353 16776704 0 20095623 99.672 18431192 38010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:03:08] CVMFS is ok
[2026-01-09 17:03:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:03:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:03:08] Further information can be found at the LHC@home message board.
[2026-01-09 17:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:03:08] Checking for apptainer binary...
[2026-01-09 17:03:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:03:08] Running /usr/bin/apptainer --version
[2026-01-09 17:03:08] apptainer version 1.4.5-2.el9
[2026-01-09 17:03:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:03:09] c-211-35-1.aglt2.org
[2026-01-09 17:03:09] apptainer works
[2026-01-09 17:03:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:03:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:03:09] Starting ATLAS job with PandaID=6963381807
[2026-01-09 17:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:47:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:47:56] 2026-01-10 22:46:46,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:47:56] 2026-01-10 22:46:47,688 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 17:47:56] 2026-01-10 22:46:47,708 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2606.6273749999996
[2026-01-10 17:47:56] 2026-01-10 22:46:47,723 | INFO     | time since job start (88955s) is within the limit (349056.0s)
[2026-01-10 17:47:56] 2026-01-10 22:46:47,746 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963381807/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:47:56] 2026-01-10 22:46:47,747 | INFO     | extracted standard info from prmon json
[2026-01-10 17:47:56] 2026-01-10 22:46:47,747 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:47:56] 2026-01-10 22:46:47,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:47:56] 2026-01-10 22:46:47,771 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:47:56] 2026-01-10 22:46:47,774 | INFO     | sum of square deviations: 959051556922.3877
[2026-01-10 17:47:56] 2026-01-10 22:46:47,895 | INFO     | sum of deviations: 5722282711064.265
[2026-01-10 17:47:56] 2026-01-10 22:46:47,896 | INFO     | mean x: 1768040737.6774194
[2026-01-10 17:47:56] 2026-01-10 22:46:47,896 | INFO     | mean y: 2880634.494166095
[2026-01-10 17:47:56] 2026-01-10 22:46:47,904 | INFO     | intersect: -10546321723.442839
[2026-01-10 17:47:56] 2026-01-10 22:46:47,906 | INFO     | chi2: 6.337342675584215
[2026-01-10 17:47:56] 2026-01-10 22:46:47,915 | INFO     | sum of square deviations: 949213136779.5334
[2026-01-10 17:47:56] 2026-01-10 22:46:48,003 | INFO     | sum of deviations: 6235241967366.094
[2026-01-10 17:47:56] 2026-01-10 22:46:48,003 | INFO     | mean x: 1768040585.1900826
[2026-01-10 17:47:56] 2026-01-10 22:46:48,003 | INFO     | mean y: 2888585.492424242
[2026-01-10 17:47:56] 2026-01-10 22:46:48,004 | INFO     | intersect: -11611110873.244743
[2026-01-10 17:47:56] 2026-01-10 22:46:48,005 | INFO     | chi2: 2.8955074066116158
[2026-01-10 17:47:56] 2026-01-10 22:46:48,006 | INFO     | current chi2=2.8955074066116158 (change=54.310385995583076 %)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,007 | INFO     | sum of square deviations: 939441722598.6278
[2026-01-10 17:47:56] 2026-01-10 22:46:48,079 | INFO     | sum of deviations: 6366332088911.4375
[2026-01-10 17:47:56] 2026-01-10 22:46:48,079 | INFO     | mean x: 1768040432.6986868
[2026-01-10 17:47:56] 2026-01-10 22:46:48,079 | INFO     | mean y: 2890628.4941257774
[2026-01-10 17:47:56] 2026-01-10 22:46:48,079 | INFO     | intersect: -11978621657.384579
[2026-01-10 17:47:56] 2026-01-10 22:46:48,081 | INFO     | chi2: 2.4153646010179535
[2026-01-10 17:47:56] 2026-01-10 22:46:48,081 | INFO     | current chi2=2.4153646010179535 (change=16.58233733049005 %)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,082 | INFO     | right removable region: 1446
[2026-01-10 17:47:56] 2026-01-10 22:46:48,089 | INFO     | sum of square deviations: 949209957038.9186
[2026-01-10 17:47:56] 2026-01-10 22:46:48,144 | INFO     | sum of deviations: 5314422837653.875
[2026-01-10 17:47:56] 2026-01-10 22:46:48,145 | INFO     | mean x: 1768040890.189394
[2026-01-10 17:47:56] 2026-01-10 22:46:48,145 | INFO     | mean y: 2886949.5895316806
[2026-01-10 17:47:56] 2026-01-10 22:46:48,145 | INFO     | intersect: -9895994551.864368
[2026-01-10 17:47:56] 2026-01-10 22:46:48,147 | INFO     | chi2: 4.0546783367236765
[2026-01-10 17:47:56] 2026-01-10 22:46:48,147 | INFO     | current chi2=4.0546783367236765 (change=36.019266366247244 %)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,149 | INFO     | sum of square deviations: 939436247862.6284
[2026-01-10 17:47:56] 2026-01-10 22:46:48,240 | INFO     | sum of deviations: 5206827513588.633
[2026-01-10 17:47:56] 2026-01-10 22:46:48,240 | INFO     | mean x: 1768041042.6986868
[2026-01-10 17:47:56] 2026-01-10 22:46:48,240 | INFO     | mean y: 2888628.2308223913
[2026-01-10 17:47:56] 2026-01-10 22:46:48,241 | INFO     | intersect: -9796482821.638561
[2026-01-10 17:47:56] 2026-01-10 22:46:48,244 | INFO     | chi2: 4.0171414418143785
[2026-01-10 17:47:56] 2026-01-10 22:46:48,245 | INFO     | current chi2=4.0171414418143785 (change=0.9257675157440269 %)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,245 | INFO     | left removable region: 20
[2026-01-10 17:47:56] 2026-01-10 22:46:48,246 | INFO     | sum of square deviations: 899124423085.457
[2026-01-10 17:47:56] 2026-01-10 22:46:48,321 | INFO     | sum of deviations: 5703950168227.373
[2026-01-10 17:47:56] 2026-01-10 22:46:48,321 | INFO     | mean x: 1768041012.2391305
[2026-01-10 17:47:56] 2026-01-10 22:46:48,321 | INFO     | mean y: 2901210.943197756
[2026-01-10 17:47:56] 2026-01-10 22:46:48,321 | INFO     | intersect: -11213363824.530958
[2026-01-10 17:47:56] 2026-01-10 22:46:48,323 | INFO     | chi2: 0.054754255536459656
[2026-01-10 17:47:56] 2026-01-10 22:46:48,324 | INFO     | current memory leak: 6.34 B/s (using 1426 data points, chi2=0.05)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | could have reported an average CPU frequency of 2658 MHz (52 samples)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | ..............................
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . Timing measurements:
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . get job = 0 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . initial setup = 3 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . payload setup = 17 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . stage-in = 0 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . payload execution = 88865 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,326 | INFO     | . stage-out = 4 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,327 | INFO     | . log creation = 1 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,327 | INFO     | ..............................
[2026-01-10 17:47:56] 2026-01-10 22:46:48,426 | INFO     | 
[2026-01-10 17:47:56] 2026-01-10 22:46:48,426 | INFO     | job summary report
[2026-01-10 17:47:56] 2026-01-10 22:46:48,426 | INFO     | --------------------------------------------------
[2026-01-10 17:47:56] 2026-01-10 22:46:48,426 | INFO     | PanDA job id: 6963381807
[2026-01-10 17:47:56] 2026-01-10 22:46:48,426 | INFO     | task id: 47962010
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | errors: (none)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | pilot state: finished 
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | transexitcode: 0
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | exeerrorcode: 0
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | exeerrordiag: 
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | exitcode: 0
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | exitmsg: OK
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | cpuconsumptiontime: 271811 s
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | nevents: 900
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | neventsw: 0
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | pid: 2081053
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | pgrp: 2081053
[2026-01-10 17:47:56] 2026-01-10 22:46:48,427 | INFO     | corecount: 8
[2026-01-10 17:47:56] 2026-01-10 22:46:48,428 | INFO     | event service: False
[2026-01-10 17:47:56] 2026-01-10 22:46:48,428 | INFO     | sizes: {0: 2284451, 1: 2284650, 12: 2284650, 14: 2284940, 23: 2284968, 88886: 2350387, 88892: 2359437, 88918: 2359627}
[2026-01-10 17:47:56] 2026-01-10 22:46:48,428 | INFO     | --------------------------------------------------
[2026-01-10 17:47:56] 2026-01-10 22:46:48,428 | INFO     | 
[2026-01-10 17:47:56] 2026-01-10 22:46:48,428 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 17:47:56] 2026-01-10 22:46:48,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,540 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,540 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,540 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,542 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:47:56] 2026-01-10 22:46:48,542 | INFO     | job 6963381807 has completed (purged errors)
[2026-01-10 17:47:56] 2026-01-10 22:46:48,546 | INFO     | overall cleanup function is called
[2026-01-10 17:47:56] 2026-01-10 22:46:49,570 | INFO     | --- collectZombieJob: --- 10, [2081053]
[2026-01-10 17:47:56] 2026-01-10 22:46:49,570 | INFO     | zombie collector waiting for pid 2081053
[2026-01-10 17:47:56] 2026-01-10 22:46:49,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:47:56] 2026-01-10 22:46:49,570 | INFO     | collected zombie processes
[2026-01-10 17:47:56] 2026-01-10 22:46:49,570 | INFO     | will attempt to kill all subprocesses of pid=2081053
[2026-01-10 17:47:56] 2026-01-10 22:46:50,141 | INFO     | process IDs to be killed: [2081053] (in reverse order)
[2026-01-10 17:47:56] 2026-01-10 22:46:50,607 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:47:56] 2026-01-10 22:46:50,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:47:56] 2026-01-10 22:46:50,619 | INFO     | did not find any defunct processes belonging to 2081053
[2026-01-10 17:47:56] 2026-01-10 22:46:50,632 | INFO     | did not find any defunct processes belonging to 2081053
[2026-01-10 17:47:56] 2026-01-10 22:46:50,633 | INFO     | ready for new job
[2026-01-10 17:47:56] 2026-01-10 22:46:50,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:47:56] 2026-01-10 22:46:50,640 | INFO     | ***************************************
[2026-01-10 17:47:56] 2026-01-10 22:46:50,640 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:47:56] 2026-01-10 22:46:50,640 | INFO     | ***************************************
[2026-01-10 17:47:56] 2026-01-10 22:46:50,640 | INFO     | 
[2026-01-10 17:47:56] 2026-01-10 22:46:50,646 | INFO     | architecture information:
[2026-01-10 17:47:56] 2026-01-10 22:46:50,647 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:47:56] 2026-01-10 22:46:50,754 | INFO     | cat /etc/os-release:
[2026-01-10 17:47:56] NAME="CentOS Linux"
[2026-01-10 17:47:56] VERSION="7 (Core)"
[2026-01-10 17:47:56] ID="centos"
[2026-01-10 17:47:56] ID_LIKE="rhel fedora"
[2026-01-10 17:47:56] VERSION_ID="7"
[2026-01-10 17:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:47:56] ANSI_COLOR="0;31"
[2026-01-10 17:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:47:56] HOME_URL="https://www.centos.org/"
[2026-01-10 17:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:47:56] 
[2026-01-10 17:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:47:56] 
[2026-01-10 17:47:56] 2026-01-10 22:46:50,754 | INFO     | ***************************************
[2026-01-10 17:47:56] 2026-01-10 22:46:51,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 17:47:56] 2026-01-10 22:46:51,389 | INFO     | sufficient remaining disk space (128862650368 B)
[2026-01-10 17:47:56] 2026-01-10 22:46:51,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:47:56] 2026-01-10 22:46:51,389 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:47:56] 2026-01-10 22:46:51,390 | INFO     | update_server=False
[2026-01-10 17:47:56] 2026-01-10 22:46:51,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:47:56] 2026-01-10 22:46:51,393 | INFO     | all job control threads have been joined
[2026-01-10 17:47:56] 2026-01-10 22:46:51,601 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 17:47:56] 2026-01-10 22:46:51,603 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 17:47:56] 2026-01-10 22:46:51,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:47:56] 2026-01-10 22:46:51,603 | INFO     | will abort loop
[2026-01-10 17:47:56] 2026-01-10 22:46:51,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:47:56] 2026-01-10 22:46:51,989 | INFO     | all payload control threads have been joined
[2026-01-10 17:47:56] 2026-01-10 22:46:52,183 | INFO     | all data control threads have been joined
[2026-01-10 17:47:56] 2026-01-10 22:46:52,396 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,399 | INFO     | [job] control thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,546 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,609 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,681 | INFO     | [job] validate thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,714 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:52,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:47:56] 2026-01-10 22:46:52,995 | INFO     | [payload] control thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:53,111 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:53,189 | INFO     | [data] control thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:53,349 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:53,360 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:53,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:47:56] 2026-01-10 22:46:53,674 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:54,447 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:54,838 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:46:55,678 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:47:56] 2026-01-10 22:47:21,258 | INFO     | PID=2071855 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:47:56] 2026-01-10 22:47:21,259 | INFO     | .. there are 13 such processes running
[2026-01-10 17:47:56] 2026-01-10 22:47:21,260 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:47:56] 2026-01-10 22:47:21,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:47:56] 2026-01-10 22:47:21,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:47:56] 2026-01-10 22:47:49,044 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:47:56] 2026-01-10 22:47:49,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223034963776)>', '<ExcThread(monitor, started 140222671079168)>']
[2026-01-10 17:47:56] 2026-01-10 22:47:50,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:47:56] 2026-01-10 22:47:50,434 | INFO     | [monitor] control thread has ended
[2026-01-10 17:47:56] 2026-01-10 22:47:54,840 | INFO     | all workflow threads have been joined
[2026-01-10 17:47:56] 2026-01-10 22:47:54,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:47:56] 2026-01-10 22:47:54,840 | INFO     | traces error code: 0
[2026-01-10 17:47:56] 2026-01-10 22:47:54,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:47:56] 2026-01-10 22:47:55,175 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:47:56] 2026-01-10 22:47:55,209 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:47:56] 2026-01-10 22:47:55,229 [wrapper] pilotpid: 2071855
[2026-01-10 17:47:56] 2026-01-10 22:47:55,272 [wrapper] Pilot exit status: 0
[2026-01-10 17:47:56] 2026-01-10 22:47:55,435 [wrapper] pandaids: 6963381807
[2026-01-10 17:47:56] 2026-01-10 22:47:55,955 [wrapper] cleanup supervisor_pilot  743830 2071856
[2026-01-10 17:47:56] 2026-01-10 22:47:55,959 [wrapper] Test setup, not cleaning
[2026-01-10 17:47:56] 2026-01-10 22:47:56,002 [wrapper] apfmon messages muted
[2026-01-10 17:47:56] 2026-01-10 22:47:56,012 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:47:56] 2026-01-10 22:47:56,018 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:47:56]  *** Error codes and diagnostics ***
[2026-01-10 17:47:56]     "exeErrorCode": 0,
[2026-01-10 17:47:56]     "exeErrorDiag": "",
[2026-01-10 17:47:56]     "pilotErrorCode": 0,
[2026-01-10 17:47:56]     "pilotErrorDiag": "",
[2026-01-10 17:47:56]  *** Listing of results directory ***
[2026-01-10 17:47:56] total 1186284
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 17:47:56] -rwx------. 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:47:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:03 run_atlas
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:03 job.xml
[2026-01-10 17:47:56] -rw-r--r--. 2 boincer umatlas 392245836 Jan  9 17:03 EVNT.47962006._000122.pool.root.1
[2026-01-10 17:47:56] -rw-r--r--. 2 boincer umatlas    592614 Jan  9 17:03 input.tar.gz
[2026-01-10 17:47:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:03 start_atlas.sh
[2026-01-10 17:47:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:03 shared
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:03 boinc_lockfile
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 17:03 pandaJob.out
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas        57 Jan  9 17:03 setup.sh.local
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas    989398 Jan  9 17:04 agis_schedconf.cvmfs.json
[2026-01-10 17:47:56] drwx------. 5 boincer umatlas      4096 Jan  9 17:04 pilot3
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas       533 Jan 10 17:34 boinc_task_state.xml
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas      6861 Jan 10 17:39 init_data.xml
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas 791346768 Jan 10 17:45 HITS.47962010._001755.pool.root.1
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas      1054 Jan 10 17:46 memory_monitor_summary.json
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas   2447748 Jan 10 17:46 log.47962010._001755.job.log.tgz.1
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas        95 Jan 10 17:46 pilot_heartbeat.json
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas      8611 Jan 10 17:46 heartbeat.json
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 17:47 boinc_mmap_file
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas        29 Jan 10 17:47 wrapper_checkpoint.txt
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas      5011 Jan 10 17:47 pilotlog.txt
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas  11171692 Jan 10 17:47 log.47962010._001755.job.log.1
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas       353 Jan 10 17:47 output.list
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas       620 Jan 10 17:47 runtime_log
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas  13639680 Jan 10 17:47 result.tar.gz
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 17:47 runtime_log.err
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas       662 Jan 10 17:47 ALRKDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0LhKDmIclGln.diag
[2026-01-10 17:47:56] -rw-r--r--. 1 boincer umatlas     21235 Jan 10 17:47 stderr.txt
[2026-01-10 17:47:56] HITS file was successfully produced:
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas 791346768 Jan 10 17:45 shared/HITS.pool.root.1
[2026-01-10 17:47:56]  *** Contents of shared directory: ***
[2026-01-10 17:47:56] total 1169780
[2026-01-10 17:47:56] -rw-r--r--. 2 boincer umatlas 392245836 Jan  9 17:03 ATLAS.root_0
[2026-01-10 17:47:56] -rw-r--r--. 2 boincer umatlas    592614 Jan  9 17:03 input.tar.gz
[2026-01-10 17:47:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:03 start_atlas.sh
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas 791346768 Jan 10 17:45 HITS.pool.root.1
[2026-01-10 17:47:56] -rw-------. 1 boincer umatlas  13639680 Jan 10 17:47 result.tar.gz
17:47:58 (2064058): run_atlas exited; CPU time 274061.395109
17:47:58 (2064058): called boinc_finish(0)

</stderr_txt>
]]>

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