Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:39 (1106884): wrapper (7.7.26015): starting
14:13:39 (1106884): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 14:13:39] Arguments: --nthreads 4
[2026-01-10 14:13:39] Threads: 4
[2026-01-10 14:13:39] Checking for CVMFS
[2026-01-10 14:13:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 14:13:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 14:13:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 14:13:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 14:13:39] 2.9.2.0 4123 3818 98364 154980 2 57 27353721 36864001 0 130560 0 2852867 99.990 141589 3381 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 14:13:39] CVMFS is ok
[2026-01-10 14:13:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 14:13:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 14:13:39] Further information can be found at the LHC@home message board.
[2026-01-10 14:13:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 14:13:39] Checking for apptainer binary...
[2026-01-10 14:13:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 14:13:39] Running /usr/bin/apptainer --version
[2026-01-10 14:13:39] apptainer version 1.4.1-1.1
[2026-01-10 14:13:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 14:13:39] atlasA237
[2026-01-10 14:13:39] apptainer works
[2026-01-10 14:13:39] Set ATHENA_PROC_NUMBER=4
[2026-01-10 14:13:39] Set ATHENA_CORE_NUMBER=4
[2026-01-10 14:13:39] Starting ATLAS job with PandaID=6963383852
[2026-01-10 14:13:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:32:24]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:32:24] 2026-01-10 20:31:33,460 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:32:24] 2026-01-10 20:31:33,473 | INFO     | cat /etc/os-release:
[2026-01-10 21:32:24] NAME="CentOS Linux"
[2026-01-10 21:32:24] VERSION="7 (Core)"
[2026-01-10 21:32:24] ID="centos"
[2026-01-10 21:32:24] ID_LIKE="rhel fedora"
[2026-01-10 21:32:24] VERSION_ID="7"
[2026-01-10 21:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:32:24] ANSI_COLOR="0;31"
[2026-01-10 21:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:32:24] HOME_URL="https://www.centos.org/"
[2026-01-10 21:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:32:24] 
[2026-01-10 21:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:32:24] 
[2026-01-10 21:32:24] 2026-01-10 20:31:33,473 | INFO     | ***************************************
[2026-01-10 21:32:24] 2026-01-10 20:31:33,976 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | INFO     | sufficient remaining disk space (332809633792 B)
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | INFO     | update_server=False
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:32:24] 2026-01-10 20:31:33,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:32:24] 2026-01-10 20:31:34,072 | INFO     | all job control threads have been joined
[2026-01-10 21:32:24] 2026-01-10 20:31:34,209 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 21:32:24] 2026-01-10 20:31:34,209 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 21:32:24] 2026-01-10 20:31:34,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:32:24] 2026-01-10 20:31:34,209 | INFO     | will abort loop
[2026-01-10 21:32:24] 2026-01-10 20:31:34,488 | INFO     | all data control threads have been joined
[2026-01-10 21:32:24] 2026-01-10 20:31:35,000 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,000 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,078 | INFO     | [job] control thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,215 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,225 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,322 | INFO     | all payload control threads have been joined
[2026-01-10 21:32:24] 2026-01-10 20:31:35,494 | INFO     | [data] control thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,559 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:35,863 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,000 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,066 | INFO     | [job] validate thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,222 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,303 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,328 | INFO     | [payload] control thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,500 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:36,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:32:24] 2026-01-10 20:31:40,865 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:31:44,664 | INFO     | job.realtimelogging is not enabled
[2026-01-10 21:32:24] 2026-01-10 20:31:45,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:32:24] 2026-01-10 20:32:04,728 | INFO     | PID=1110671 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:32:24] 2026-01-10 20:32:04,728 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:32:24] 2026-01-10 20:32:04,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:32:24] 2026-01-10 20:32:04,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:32:24] 2026-01-10 20:32:18,668 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:32:24] 2026-01-10 20:32:18,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907635726144)>', '<ExcThread(monitor, started 139906328286976)>']
[2026-01-10 21:32:24] 2026-01-10 20:32:19,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:32:24] 2026-01-10 20:32:19,809 | INFO     | [monitor] control thread has ended
[2026-01-10 21:32:24] 2026-01-10 20:32:23,958 | INFO     | all workflow threads have been joined
[2026-01-10 21:32:24] 2026-01-10 20:32:23,958 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:32:24] 2026-01-10 20:32:23,958 | INFO     | traces error code: 0
[2026-01-10 21:32:24] 2026-01-10 20:32:23,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:32:24] 2026-01-10 20:32:24,027 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:32:24] 2026-01-10 20:32:24,031 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:32:24] 2026-01-10 20:32:24,035 [wrapper] pilotpid: 1110671
[2026-01-10 21:32:24] 2026-01-10 20:32:24,038 [wrapper] Pilot exit status: 0
[2026-01-10 21:32:24] 2026-01-10 20:32:24,048 [wrapper] pandaids: 6963383852
[2026-01-10 21:32:24] 2026-01-10 20:32:24,070 [wrapper] cleanup supervisor_pilot 1164592 1110672
[2026-01-10 21:32:24] 2026-01-10 20:32:24,074 [wrapper] Test setup, not cleaning
[2026-01-10 21:32:24] 2026-01-10 20:32:24,078 [wrapper] apfmon messages muted
[2026-01-10 21:32:24] 2026-01-10 20:32:24,082 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:32:24] 2026-01-10 20:32:24,085 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:32:24]  *** Error codes and diagnostics ***
[2026-01-10 21:32:24]     "exeErrorCode": 0,
[2026-01-10 21:32:24]     "exeErrorDiag": "",
[2026-01-10 21:32:24]     "pilotErrorCode": 0,
[2026-01-10 21:32:24]     "pilotErrorDiag": "",
[2026-01-10 21:32:24]  *** Listing of results directory ***
[2026-01-10 21:32:24] total 1176532
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 21:32:24] -rwx------ 1 boinc boinc     36322 Jan  9 08:15 runpilot2-wrapper.sh
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:16 queuedata.json
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc       100 Jan 10 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:32:24] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 14:13 run_atlas
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc       105 Jan 10 14:13 job.xml
[2026-01-10 21:32:24] -rw-r--r-- 2 boinc boinc 393730590 Jan 10 14:13 EVNT.47962006._000129.pool.root.1
[2026-01-10 21:32:24] drwxrwx--x 2 boinc boinc      4096 Jan 10 14:13 shared
[2026-01-10 21:32:24] -rw-r--r-- 2 boinc boinc    592613 Jan 10 14:13 input.tar.gz
[2026-01-10 21:32:24] -rw-r--r-- 2 boinc boinc     15847 Jan 10 14:13 start_atlas.sh
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc         0 Jan 10 14:13 boinc_setup_complete
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc      6371 Jan 10 14:13 init_data.xml
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc         0 Jan 10 14:13 boinc_lockfile
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc      2893 Jan 10 14:13 pandaJob.out
[2026-01-10 21:32:24] -rw------- 1 boinc boinc    989556 Jan 10 14:13 agis_schedconf.cvmfs.json
[2026-01-10 21:32:24] drwx------ 5 boinc boinc      4096 Jan 10 14:13 pilot3
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc       532 Jan 10 21:27 boinc_task_state.xml
[2026-01-10 21:32:24] -rw------- 1 boinc boinc 797220179 Jan 10 21:31 HITS.47962010._001840.pool.root.1
[2026-01-10 21:32:24] -rw------- 1 boinc boinc        95 Jan 10 21:31 pilot_heartbeat.json
[2026-01-10 21:32:24] -rw------- 1 boinc boinc      1025 Jan 10 21:31 memory_monitor_summary.json
[2026-01-10 21:32:24] -rw------- 1 boinc boinc   1516240 Jan 10 21:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:32:24] -rw------- 1 boinc boinc   1251251 Jan 10 21:31 log.47962010._001840.job.log.tgz.1
[2026-01-10 21:32:24] -rw------- 1 boinc boinc      8572 Jan 10 21:31 heartbeat.json
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc      8192 Jan 10 21:32 boinc_mmap_file
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc        29 Jan 10 21:32 wrapper_checkpoint.txt
[2026-01-10 21:32:24] -rw------- 1 boinc boinc      5010 Jan 10 21:32 pilotlog.txt
[2026-01-10 21:32:24] -rw------- 1 boinc boinc   3703717 Jan 10 21:32 log.47962010._001840.job.log.1
[2026-01-10 21:32:24] -rw------- 1 boinc boinc       353 Jan 10 21:32 output.list
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc       620 Jan 10 21:32 runtime_log
[2026-01-10 21:32:24] -rw------- 1 boinc boinc   4976640 Jan 10 21:32 result.tar.gz
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc      8913 Jan 10 21:32 runtime_log.err
[2026-01-10 21:32:24] -rw------- 1 boinc boinc       669 Jan 10 21:32 F9zLDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdMhKDmEOnN4n.diag
[2026-01-10 21:32:24] -rw-r--r-- 1 boinc boinc      9209 Jan 10 21:32 stderr.txt
[2026-01-10 21:32:24] HITS file was successfully produced:
[2026-01-10 21:32:24] -rw------- 1 boinc boinc 797220179 Jan 10 21:31 shared/HITS.pool.root.1
[2026-01-10 21:32:24]  *** Contents of shared directory: ***
[2026-01-10 21:32:24] total 1168504
[2026-01-10 21:32:24] -rw-r--r-- 2 boinc boinc 393730590 Jan 10 14:13 ATLAS.root_0
[2026-01-10 21:32:24] -rw-r--r-- 2 boinc boinc    592613 Jan 10 14:13 input.tar.gz
[2026-01-10 21:32:24] -rw-r--r-- 2 boinc boinc     15847 Jan 10 14:13 start_atlas.sh
[2026-01-10 21:32:24] -rw------- 1 boinc boinc 797220179 Jan 10 21:31 HITS.pool.root.1
[2026-01-10 21:32:24] -rw------- 1 boinc boinc   4976640 Jan 10 21:32 result.tar.gz
21:32:25 (1106884): run_atlas exited; CPU time 103072.585111
21:32:25 (1106884): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN