Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:32:03 (3377098): wrapper (7.7.26015): starting
19:32:03 (3377098): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:32:03] Arguments: --nthreads 8
[2026-01-09 19:32:03] Threads: 8
[2026-01-09 19:32:03] Checking for CVMFS
[2026-01-09 19:32:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:32:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:32:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:32:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:32:04] 2.13.3.0 7489 94133 404564 154962 2 110 24611733 32935937 13877 16776704 0 446270880 99.521 565716588 39805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:32:04] CVMFS is ok
[2026-01-09 19:32:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:32:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:32:04] Further information can be found at the LHC@home message board.
[2026-01-09 19:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:32:04] Checking for apptainer binary...
[2026-01-09 19:32:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:32:04] Running /usr/bin/apptainer --version
[2026-01-09 19:32:04] apptainer version 1.4.5-2.el9
[2026-01-09 19:32:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:32:05] c7-13-32.aglt2.org
[2026-01-09 19:32:05] apptainer works
[2026-01-09 19:32:05] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:32:05] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:32:05] Starting ATLAS job with PandaID=6963383896
[2026-01-09 19:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:31:20]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:31:20] 2026-01-10 03:30:41,510 | INFO     | time since job start (10674s) is within the limit (349056.0s)
[2026-01-09 22:31:20] 2026-01-10 03:30:43,523 | INFO     | time since job start (10676s) is within the limit (349056.0s)
[2026-01-09 22:31:20] 2026-01-10 03:30:43,537 | INFO     | monitor loop #763: job 0:6963383896 is in state 'finished'
[2026-01-09 22:31:20] 2026-01-10 03:30:43,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:31:20] 2026-01-10 03:30:45,009 | INFO     | PID=3381694 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:31:20] 2026-01-10 03:30:45,010 | INFO     | .. there are 14 such processes running
[2026-01-09 22:31:20] 2026-01-10 03:30:46,017 | INFO     | time since job start (10679s) is within the limit (349056.0s)
[2026-01-09 22:31:20] 2026-01-10 03:30:46,060 | INFO     | monitor loop #764: job 0:6963383896 is in state 'finished'
[2026-01-09 22:31:20] 2026-01-10 03:30:46,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,318 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:31:20] 2026-01-10 03:30:47,322 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.9140625
[2026-01-09 22:31:20] 2026-01-10 03:30:47,333 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963383896/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,333 | INFO     | extracted standard info from prmon json
[2026-01-09 22:31:20] 2026-01-10 03:30:47,333 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:31:20] 2026-01-10 03:30:47,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:31:20] 2026-01-10 03:30:47,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:31:20] 2026-01-10 03:30:47,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:31:20] 2026-01-10 03:30:47,337 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:31:20] 2026-01-10 03:30:47,337 | INFO     | sum of square deviations: 1633457498.0287323
[2026-01-09 22:31:20] 2026-01-10 03:30:47,338 | INFO     | sum of deviations: -5780765389.90229
[2026-01-09 22:31:20] 2026-01-10 03:30:47,338 | INFO     | mean x: 1768010527.591954
[2026-01-09 22:31:20] 2026-01-10 03:30:47,338 | INFO     | mean y: 2570409.2126436783
[2026-01-09 22:31:20] 2026-01-10 03:30:47,338 | INFO     | intersect: 6259515618.5128975
[2026-01-09 22:31:20] 2026-01-10 03:30:47,338 | INFO     | chi2: 2.871031866048165
[2026-01-09 22:31:20] 2026-01-10 03:30:47,339 | INFO     | sum of square deviations: 1496650510.4852028
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | sum of deviations: 5454303922.071012
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | mean x: 1768010375.0946746
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | mean y: 2582648.74556213
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | intersect: -6440648991.228188
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | chi2: 2.205229594683289
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | current chi2=2.205229594683289 (change=23.19034766692856 %)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,340 | INFO     | right removable region: 168
[2026-01-09 22:31:20] 2026-01-10 03:30:47,341 | INFO     | sum of square deviations: 1496640750.4852028
[2026-01-09 22:31:20] 2026-01-10 03:30:47,341 | INFO     | sum of deviations: -41256613177.00002
[2026-01-09 22:31:20] 2026-01-10 03:30:47,341 | INFO     | mean x: 1768010680.0946746
[2026-01-09 22:31:20] 2026-01-10 03:30:47,341 | INFO     | mean y: 2609551.0
[2026-01-09 22:31:20] 2026-01-10 03:30:47,342 | INFO     | intersect: 48739845055.127014
[2026-01-09 22:31:20] 2026-01-10 03:30:47,342 | INFO     | chi2: 0.8281155189802795
[2026-01-09 22:31:20] 2026-01-10 03:30:47,342 | INFO     | current chi2=0.8281155189802795 (change=71.15617110442804 %)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,342 | INFO     | sum of square deviations: 1367684615.4390273
[2026-01-09 22:31:20] 2026-01-10 03:30:47,343 | INFO     | sum of deviations: -37836406762.29269
[2026-01-09 22:31:20] 2026-01-10 03:30:47,343 | INFO     | mean x: 1768010832.597561
[2026-01-09 22:31:20] 2026-01-10 03:30:47,343 | INFO     | mean y: 2605438.7682926827
[2026-01-09 22:31:20] 2026-01-10 03:30:47,343 | INFO     | intersect: 48913864852.78729
[2026-01-09 22:31:20] 2026-01-10 03:30:47,343 | INFO     | chi2: 0.8137347163589571
[2026-01-09 22:31:20] 2026-01-10 03:30:47,344 | INFO     | current chi2=0.8137347163589571 (change=1.7365696321004238 %)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,344 | INFO     | left removable region: 20
[2026-01-09 22:31:20] 2026-01-10 03:30:47,344 | INFO     | sum of square deviations: 1005151123.2702714
[2026-01-09 22:31:20] 2026-01-10 03:30:47,345 | INFO     | sum of deviations: -17264296979.36486
[2026-01-09 22:31:20] 2026-01-10 03:30:47,345 | INFO     | mean x: 1768010954.608108
[2026-01-09 22:31:20] 2026-01-10 03:30:47,345 | INFO     | mean y: 2607513.304054054
[2026-01-09 22:31:20] 2026-01-10 03:30:47,345 | INFO     | intersect: 30369649320.72528
[2026-01-09 22:31:20] 2026-01-10 03:30:47,345 | INFO     | chi2: 0.09422680969804921
[2026-01-09 22:31:20] 2026-01-10 03:30:47,345 | INFO     | current memory leak: -17.18 B/s (using 148 data points, chi2=0.09)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | could have reported an average CPU frequency of 3290 MHz (9 samples)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | ..............................
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . Timing measurements:
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . get job = 0 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . initial setup = 4 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . payload setup = 30 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . stage-in = 0 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . payload execution = 10584 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . stage-out = 0 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | . log creation = 0 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,346 | INFO     | ..............................
[2026-01-09 22:31:20] 2026-01-10 03:30:47,458 | INFO     | 
[2026-01-09 22:31:20] 2026-01-10 03:30:47,458 | INFO     | job summary report
[2026-01-09 22:31:20] 2026-01-10 03:30:47,458 | INFO     | --------------------------------------------------
[2026-01-09 22:31:20] 2026-01-10 03:30:47,458 | INFO     | PanDA job id: 6963383896
[2026-01-09 22:31:20] 2026-01-10 03:30:47,458 | INFO     | task id: 47929288
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | errors: (none)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | pilot state: finished 
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | transexitcode: 0
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | exeerrorcode: 0
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | exeerrordiag: 
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | exitcode: 0
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | exitmsg: OK
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | cpuconsumptiontime: 33570 s
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | nevents: 400
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | neventsw: 0
[2026-01-09 22:31:20] 2026-01-10 03:30:47,459 | INFO     | pid: 3391561
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | pgrp: 3391561
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | corecount: 8
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | event service: False
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | sizes: {0: 2283967, 11: 2283967, 15: 2284257, 22: 2284285, 10617: 2313373, 10619: 2322371, 10622: 2322555, 10637: 2322813}
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | --------------------------------------------------
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | 
[2026-01-09 22:31:20] 2026-01-10 03:30:47,460 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | job 6963383896 has completed (purged errors)
[2026-01-09 22:31:20] 2026-01-10 03:30:47,524 | INFO     | overall cleanup function is called
[2026-01-09 22:31:20] 2026-01-10 03:30:48,536 | INFO     | --- collectZombieJob: --- 10, [3391561]
[2026-01-09 22:31:20] 2026-01-10 03:30:48,536 | INFO     | zombie collector waiting for pid 3391561
[2026-01-09 22:31:20] 2026-01-10 03:30:48,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:31:20] 2026-01-10 03:30:48,537 | INFO     | collected zombie processes
[2026-01-09 22:31:20] 2026-01-10 03:30:48,537 | INFO     | will attempt to kill all subprocesses of pid=3391561
[2026-01-09 22:31:20] 2026-01-10 03:30:48,886 | INFO     | process IDs to be killed: [3391561] (in reverse order)
[2026-01-09 22:31:20] 2026-01-10 03:30:49,005 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:31:20] 2026-01-10 03:30:49,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:31:20] 2026-01-10 03:30:49,021 | INFO     | did not find any defunct processes belonging to 3391561
[2026-01-09 22:31:20] 2026-01-10 03:30:49,036 | INFO     | did not find any defunct processes belonging to 3391561
[2026-01-09 22:31:20] 2026-01-10 03:30:49,036 | INFO     | ready for new job
[2026-01-09 22:31:20] 2026-01-10 03:30:49,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:31:20] 2026-01-10 03:30:49,038 | INFO     | ***************************************
[2026-01-09 22:31:20] 2026-01-10 03:30:49,038 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:31:20] 2026-01-10 03:30:49,038 | INFO     | ***************************************
[2026-01-09 22:31:20] 2026-01-10 03:30:49,038 | INFO     | 
[2026-01-09 22:31:20] 2026-01-10 03:30:49,042 | INFO     | architecture information:
[2026-01-09 22:31:20] 2026-01-10 03:30:49,042 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:31:20] 2026-01-10 03:30:49,097 | INFO     | cat /etc/os-release:
[2026-01-09 22:31:20] NAME="CentOS Linux"
[2026-01-09 22:31:20] VERSION="7 (Core)"
[2026-01-09 22:31:20] ID="centos"
[2026-01-09 22:31:20] ID_LIKE="rhel fedora"
[2026-01-09 22:31:20] VERSION_ID="7"
[2026-01-09 22:31:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:31:20] ANSI_COLOR="0;31"
[2026-01-09 22:31:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:31:20] HOME_URL="https://www.centos.org/"
[2026-01-09 22:31:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:31:20] 
[2026-01-09 22:31:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:31:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:31:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:31:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:31:20] 
[2026-01-09 22:31:20] 2026-01-10 03:30:49,097 | INFO     | ***************************************
[2026-01-09 22:31:20] 2026-01-10 03:30:49,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:31:20] 2026-01-10 03:30:49,620 | INFO     | sufficient remaining disk space (95696191488 B)
[2026-01-09 22:31:20] 2026-01-10 03:30:49,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:31:20] 2026-01-10 03:30:49,620 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:31:20] 2026-01-10 03:30:49,620 | INFO     | update_server=False
[2026-01-09 22:31:20] 2026-01-10 03:30:49,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:31:20] 2026-01-10 03:30:49,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:31:20] 2026-01-10 03:30:49,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:31:20] 2026-01-10 03:30:49,621 | INFO     | aborting loop
[2026-01-09 22:31:20] 2026-01-10 03:30:50,397 | INFO     | all job control threads have been joined
[2026-01-09 22:31:20] 2026-01-10 03:30:50,497 | INFO     | all payload control threads have been joined
[2026-01-09 22:31:20] 2026-01-10 03:30:50,582 | INFO     | all data control threads have been joined
[2026-01-09 22:31:20] 2026-01-10 03:30:50,625 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:50,626 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:50,723 | INFO     | [job] validate thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:50,806 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:50,857 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:50,932 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,074 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:31:20] 2026-01-10 03:30:51,406 | INFO     | [job] control thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,517 | INFO     | [payload] control thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,607 | INFO     | [data] control thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,613 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,635 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,704 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:51,732 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:52,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:31:20] 2026-01-10 03:30:53,477 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:30:55,310 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:31:20] 2026-01-10 03:31:04,929 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:31:20] 2026-01-10 03:31:05,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560900904768)>', '<ExcThread(monitor, started 140560555816704)>']
[2026-01-09 22:31:20] 2026-01-10 03:31:10,316 | INFO     | all workflow threads have been joined
[2026-01-09 22:31:20] 2026-01-10 03:31:10,316 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:31:20] 2026-01-10 03:31:10,316 | INFO     | traces error code: 0
[2026-01-09 22:31:20] 2026-01-10 03:31:10,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:31:20] 2026-01-10 03:31:19,730 | INFO     | PID=3381694 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:31:20] 2026-01-10 03:31:19,732 | INFO     | .. there are 14 such processes running
[2026-01-09 22:31:20] 2026-01-10 03:31:19,733 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:31:20] 2026-01-10 03:31:19,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:31:20] 2026-01-10 03:31:19,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:31:20] 2026-01-10 03:31:19,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:31:20] 2026-01-10 03:31:19,733 | INFO     | [monitor] control thread has ended
[2026-01-09 22:31:20] 2026-01-10 03:31:19,850 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:31:20] 2026-01-10 03:31:19,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:31:20] 2026-01-10 03:31:19,856 [wrapper] pilotpid: 3381694
[2026-01-09 22:31:20] 2026-01-10 03:31:19,860 [wrapper] Pilot exit status: 0
[2026-01-09 22:31:20] 2026-01-10 03:31:19,939 [wrapper] pandaids: 6963383896
[2026-01-09 22:31:20] 2026-01-10 03:31:20,099 [wrapper] cleanup supervisor_pilot 4138496 3381695
[2026-01-09 22:31:20] 2026-01-10 03:31:20,102 [wrapper] Test setup, not cleaning
[2026-01-09 22:31:20] 2026-01-10 03:31:20,104 [wrapper] apfmon messages muted
[2026-01-09 22:31:20] 2026-01-10 03:31:20,107 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:31:20] 2026-01-10 03:31:20,132 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:31:20]  *** Error codes and diagnostics ***
[2026-01-09 22:31:20]     "exeErrorCode": 0,
[2026-01-09 22:31:20]     "exeErrorDiag": "",
[2026-01-09 22:31:20]     "pilotErrorCode": 0,
[2026-01-09 22:31:20]     "pilotErrorDiag": "",
[2026-01-09 22:31:20]  *** Listing of results directory ***
[2026-01-09 22:31:20] total 436324
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-09 22:31:20] -rwx------. 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:31:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:32 run_atlas
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:32 job.xml
[2026-01-09 22:31:20] -rw-r--r--. 2 boincer umatlas 252053687 Jan  9 19:32 EVNT.47929286._000074.pool.root.1
[2026-01-09 22:31:20] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:32 start_atlas.sh
[2026-01-09 22:31:20] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:32 shared
[2026-01-09 22:31:20] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 19:32 input.tar.gz
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:32 boinc_lockfile
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas      2550 Jan  9 19:32 pandaJob.out
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas        57 Jan  9 19:32 setup.sh.local
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas    989374 Jan  9 19:32 agis_schedconf.cvmfs.json
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:31:20] drwx------. 5 boincer umatlas      4096 Jan  9 19:32 pilot3
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas      6904 Jan  9 22:28 init_data.xml
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas 187063223 Jan  9 22:29 HITS.47929288._002357.pool.root.1
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas       531 Jan  9 22:29 boinc_task_state.xml
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas      1034 Jan  9 22:30 memory_monitor_summary.json
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas    399173 Jan  9 22:30 log.47929288._002357.job.log.tgz.1
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas      7781 Jan  9 22:30 heartbeat.json
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:31 wrapper_checkpoint.txt
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:31 boinc_mmap_file
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas       823 Jan  9 22:31 pilotlog.txt
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas        95 Jan  9 22:31 pilot_heartbeat.json
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas   1485442 Jan  9 22:31 log.47929288._002357.job.log.1
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas       357 Jan  9 22:31 output.list
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:31 runtime_log
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas   1904640 Jan  9 22:31 result.tar.gz
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 22:31 runtime_log.err
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas       656 Jan  9 22:31 2XuLDmWtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfYmKDmnFHT4m.diag
[2026-01-09 22:31:20] -rw-r--r--. 1 boincer umatlas     21462 Jan  9 22:31 stderr.txt
[2026-01-09 22:31:20] HITS file was successfully produced:
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas 187063223 Jan  9 22:29 shared/HITS.pool.root.1
[2026-01-09 22:31:20]  *** Contents of shared directory: ***
[2026-01-09 22:31:20] total 431288
[2026-01-09 22:31:20] -rw-r--r--. 2 boincer umatlas 252053687 Jan  9 19:32 ATLAS.root_0
[2026-01-09 22:31:20] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:32 start_atlas.sh
[2026-01-09 22:31:20] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 19:32 input.tar.gz
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas 187063223 Jan  9 22:29 HITS.pool.root.1
[2026-01-09 22:31:20] -rw-------. 1 boincer umatlas   1904640 Jan  9 22:31 result.tar.gz
22:31:22 (3377098): run_atlas exited; CPU time 33803.144315
22:31:22 (3377098): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN