Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:48:08 (484091): wrapper (7.7.26015): starting
18:48:08 (484091): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 18:48:08] Arguments: --nthreads 10
[2026-01-09 18:48:08] Threads: 10
[2026-01-09 18:48:08] Checking for CVMFS
[2026-01-09 18:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:48:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:48:08] 2.13.3.0 10223 94068 175204 154961 3 625 27588148 40960001 30242 16776704 0 1010179259 99.692 830531154 51134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:48:08] CVMFS is ok
[2026-01-09 18:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:48:08] Further information can be found at the LHC@home message board.
[2026-01-09 18:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:48:08] Checking for apptainer binary...
[2026-01-09 18:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:48:08] Running /usr/bin/apptainer --version
[2026-01-09 18:48:08] apptainer version 1.4.5-2.el9
[2026-01-09 18:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:48:09] c8-7-6.aglt2.org
[2026-01-09 18:48:09] apptainer works
[2026-01-09 18:48:09] Set ATHENA_PROC_NUMBER=10
[2026-01-09 18:48:09] Set ATHENA_CORE_NUMBER=10
[2026-01-09 18:48:09] Starting ATLAS job with PandaID=6963195787
[2026-01-09 18:48:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:32:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:32:52] 2026-01-10 02:31:47,080 | INFO     | executing command: lscpu
[2026-01-09 21:32:52] 2026-01-10 02:31:47,171 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:32:52] 2026-01-10 02:31:47,763 | INFO     | monitor loop #659: job 0:6963195787 is in state 'finished'
[2026-01-09 21:32:52] 2026-01-10 02:31:47,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:32:52] 2026-01-10 02:31:48,322 | INFO     | time since job start (9801s) is within the limit (349056.0s)
[2026-01-09 21:32:52] 2026-01-10 02:31:50,268 | INFO     | monitor loop #660: job 0:6963195787 is in state 'finished'
[2026-01-09 21:32:52] 2026-01-10 02:31:50,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:32:52] 2026-01-10 02:31:50,329 | INFO     | time since job start (9803s) is within the limit (349056.0s)
[2026-01-09 21:32:52] 2026-01-10 02:31:52,336 | INFO     | time since job start (9805s) is within the limit (349056.0s)
[2026-01-09 21:32:52] 2026-01-10 02:31:52,773 | INFO     | monitor loop #661: job 0:6963195787 is in state 'finished'
[2026-01-09 21:32:52] 2026-01-10 02:31:52,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:32:52] 2026-01-10 02:31:54,343 | INFO     | time since job start (9807s) is within the limit (349056.0s)
[2026-01-09 21:32:52] 2026-01-10 02:31:55,278 | INFO     | monitor loop #662: job 0:6963195787 is in state 'finished'
[2026-01-09 21:32:52] 2026-01-10 02:31:55,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:32:52] 2026-01-10 02:31:56,350 | INFO     | time since job start (9809s) is within the limit (349056.0s)
[2026-01-09 21:32:52] 2026-01-10 02:31:57,783 | INFO     | monitor loop #663: job 0:6963195787 is in state 'finished'
[2026-01-09 21:32:52] 2026-01-10 02:31:57,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:32:52] 2026-01-10 02:31:58,357 | INFO     | time since job start (9811s) is within the limit (349056.0s)
[2026-01-09 21:32:52] 2026-01-10 02:31:58,999 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:32:52] 2026-01-10 02:31:59,004 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.996414062501
[2026-01-09 21:32:52] 2026-01-10 02:31:59,019 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963195787/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,020 | INFO     | extracted standard info from prmon json
[2026-01-09 21:32:52] 2026-01-10 02:31:59,020 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:32:52] 2026-01-10 02:31:59,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:32:52] 2026-01-10 02:31:59,027 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:32:52] 2026-01-10 02:31:59,027 | INFO     | sum of square deviations: 1269410521.1000001
[2026-01-09 21:32:52] 2026-01-10 02:31:59,028 | INFO     | sum of deviations: -179230346127.69998
[2026-01-09 21:32:52] 2026-01-10 02:31:59,028 | INFO     | mean x: 1768007421.425
[2026-01-09 21:32:52] 2026-01-10 02:31:59,028 | INFO     | mean y: 2615506.525
[2026-01-09 21:32:52] 2026-01-10 02:31:59,028 | INFO     | intersect: 249630751425.67123
[2026-01-09 21:32:52] 2026-01-10 02:31:59,028 | INFO     | chi2: 23.95568579304624
[2026-01-09 21:32:52] 2026-01-10 02:31:59,028 | INFO     | sum of square deviations: 1154116231.9741974
[2026-01-09 21:32:52] 2026-01-10 02:31:59,045 | INFO     | sum of deviations: -133973430136.54195
[2026-01-09 21:32:52] 2026-01-10 02:31:59,045 | INFO     | mean x: 1768007268.9870968
[2026-01-09 21:32:52] 2026-01-10 02:31:59,045 | INFO     | mean y: 2675436.729032258
[2026-01-09 21:32:52] 2026-01-10 02:31:59,045 | INFO     | intersect: 205238501578.2305
[2026-01-09 21:32:52] 2026-01-10 02:31:59,045 | INFO     | chi2: 20.51661680081692
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | current chi2=20.51661680081692 (change=14.355961344373613 %)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | right removable region: 154
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | sum of square deviations: 1153937870.9419298
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | sum of deviations: -220045327638.77423
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | mean x: 1768007573.9806452
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | mean y: 2668941.7419354836
[2026-01-09 21:32:52] 2026-01-10 02:31:59,046 | INFO     | intersect: 337145435186.8957
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | chi2: 21.168137052642713
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | current chi2=21.168137052642713 (change=11.636271925108838 %)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | left removable region: 10
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | sum of square deviations: 925314541.9930569
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | sum of deviations: -163353224170.45142
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | mean x: 1768007543.5069444
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | mean y: 2745362.951388889
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | intersect: 312123348123.03
[2026-01-09 21:32:52] 2026-01-10 02:31:59,047 | INFO     | chi2: 17.053991098831833
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | current memory leak: -176.54 B/s (using 144 data points, chi2=17.05)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | ..............................
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . Timing measurements:
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . get job = 0 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . initial setup = 2 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . payload setup = 19 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . stage-in = 0 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . payload execution = 9737 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . stage-out = 4 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | . log creation = 2 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,048 | INFO     | ..............................
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | 
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | job summary report
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | --------------------------------------------------
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | PanDA job id: 6963195787
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | task id: 47962010
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | errors: (none)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | pilot state: finished 
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | transexitcode: 0
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | exeerrorcode: 0
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | exeerrordiag: 
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | exitcode: 0
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | exitmsg: OK
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | cpuconsumptiontime: 67700 s
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | nevents: 450
[2026-01-09 21:32:52] 2026-01-10 02:31:59,761 | INFO     | neventsw: 0
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | pid: 496004
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | pgrp: 496004
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | corecount: 10
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | event service: False
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | sizes: {0: 2284620, 11: 2284910, 21: 2284910, 9761: 2314563, 9762: 2314562, 9767: 2323612, 9769: 2323796, 9781: 2324106}
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | --------------------------------------------------
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | 
[2026-01-09 21:32:52] 2026-01-10 02:31:59,762 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 21:32:52] 2026-01-10 02:31:59,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | job 6963195787 has completed (purged errors)
[2026-01-09 21:32:52] 2026-01-10 02:31:59,865 | INFO     | overall cleanup function is called
[2026-01-09 21:32:52] 2026-01-10 02:32:00,909 | INFO     | --- collectZombieJob: --- 10, [496004]
[2026-01-09 21:32:52] 2026-01-10 02:32:00,909 | INFO     | zombie collector waiting for pid 496004
[2026-01-09 21:32:52] 2026-01-10 02:32:00,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:32:52] 2026-01-10 02:32:00,909 | INFO     | collected zombie processes
[2026-01-09 21:32:52] 2026-01-10 02:32:00,909 | INFO     | will attempt to kill all subprocesses of pid=496004
[2026-01-09 21:32:52] 2026-01-10 02:32:01,835 | INFO     | process IDs to be killed: [496004] (in reverse order)
[2026-01-09 21:32:52] 2026-01-10 02:32:02,231 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:32:52] 2026-01-10 02:32:02,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:32:52] 2026-01-10 02:32:02,263 | INFO     | did not find any defunct processes belonging to 496004
[2026-01-09 21:32:52] 2026-01-10 02:32:02,286 | INFO     | did not find any defunct processes belonging to 496004
[2026-01-09 21:32:52] 2026-01-10 02:32:02,286 | INFO     | ready for new job
[2026-01-09 21:32:52] 2026-01-10 02:32:02,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:32:52] 2026-01-10 02:32:02,289 | INFO     | ***************************************
[2026-01-09 21:32:52] 2026-01-10 02:32:02,289 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:32:52] 2026-01-10 02:32:02,289 | INFO     | ***************************************
[2026-01-09 21:32:52] 2026-01-10 02:32:02,289 | INFO     | 
[2026-01-09 21:32:52] 2026-01-10 02:32:02,311 | INFO     | architecture information:
[2026-01-09 21:32:52] 2026-01-10 02:32:02,315 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:32:52] 2026-01-10 02:32:02,378 | INFO     | cat /etc/os-release:
[2026-01-09 21:32:52] NAME="CentOS Linux"
[2026-01-09 21:32:52] VERSION="7 (Core)"
[2026-01-09 21:32:52] ID="centos"
[2026-01-09 21:32:52] ID_LIKE="rhel fedora"
[2026-01-09 21:32:52] VERSION_ID="7"
[2026-01-09 21:32:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:32:52] ANSI_COLOR="0;31"
[2026-01-09 21:32:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:32:52] HOME_URL="https://www.centos.org/"
[2026-01-09 21:32:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:32:52] 
[2026-01-09 21:32:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:32:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:32:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:32:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:32:52] 
[2026-01-09 21:32:52] 2026-01-10 02:32:02,383 | INFO     | ***************************************
[2026-01-09 21:32:52] 2026-01-10 02:32:02,886 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 21:32:52] 2026-01-10 02:32:02,971 | INFO     | sufficient remaining disk space (168690712576 B)
[2026-01-09 21:32:52] 2026-01-10 02:32:02,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:32:52] 2026-01-10 02:32:02,972 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:32:52] 2026-01-10 02:32:02,972 | INFO     | update_server=False
[2026-01-09 21:32:52] 2026-01-10 02:32:02,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:32:52] 2026-01-10 02:32:02,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:32:52] 2026-01-10 02:32:02,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:32:52] 2026-01-10 02:32:03,239 | INFO     | all data control threads have been joined
[2026-01-09 21:32:52] 2026-01-10 02:32:03,499 | INFO     | all job control threads have been joined
[2026-01-09 21:32:52] 2026-01-10 02:32:03,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:32:52] 2026-01-10 02:32:03,819 | INFO     | aborting loop
[2026-01-09 21:32:52] 2026-01-10 02:32:03,978 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,084 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,202 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,245 | INFO     | [data] control thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,328 | INFO     | all payload control threads have been joined
[2026-01-09 21:32:52] 2026-01-10 02:32:04,370 | INFO     | [job] validate thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:32:52] 2026-01-10 02:32:04,505 | INFO     | [job] control thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,525 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,655 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,825 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:04,978 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:05,101 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:05,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:05,274 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:05,333 | INFO     | [payload] control thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:05,437 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:06,980 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:32:52] 2026-01-10 02:32:33,325 | INFO     | PID=487884 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 21:32:52] 2026-01-10 02:32:33,325 | INFO     | .. there are 27 such processes running
[2026-01-09 21:32:52] 2026-01-10 02:32:33,325 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:32:52] 2026-01-10 02:32:33,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:32:52] 2026-01-10 02:32:33,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:32:52] 2026-01-10 02:32:44,469 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:32:52] 2026-01-10 02:32:45,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066081281856)>', '<ExcThread(monitor, started 140065451796224)>']
[2026-01-09 21:32:52] 2026-01-10 02:32:45,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:32:52] 2026-01-10 02:32:45,412 | INFO     | [monitor] control thread has ended
[2026-01-09 21:32:52] 2026-01-10 02:32:50,164 | INFO     | all workflow threads have been joined
[2026-01-09 21:32:52] 2026-01-10 02:32:50,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:32:52] 2026-01-10 02:32:50,164 | INFO     | traces error code: 0
[2026-01-09 21:32:52] 2026-01-10 02:32:50,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:32:52] 2026-01-10 02:32:50,478 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:32:52] 2026-01-10 02:32:50,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:32:52] 2026-01-10 02:32:50,519 [wrapper] pilotpid: 487884
[2026-01-09 21:32:52] 2026-01-10 02:32:50,535 [wrapper] Pilot exit status: 0
[2026-01-09 21:32:52] 2026-01-10 02:32:50,713 [wrapper] pandaids: 6963195787
[2026-01-09 21:32:52] 2026-01-10 02:32:51,065 [wrapper] cleanup supervisor_pilot 1285423 487885
[2026-01-09 21:32:52] 2026-01-10 02:32:51,086 [wrapper] Test setup, not cleaning
[2026-01-09 21:32:52] 2026-01-10 02:32:51,113 [wrapper] apfmon messages muted
[2026-01-09 21:32:52] 2026-01-10 02:32:51,145 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:32:52] 2026-01-10 02:32:51,170 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:32:52]  *** Error codes and diagnostics ***
[2026-01-09 21:32:52]     "exeErrorCode": 0,
[2026-01-09 21:32:52]     "exeErrorDiag": "",
[2026-01-09 21:32:52]     "pilotErrorCode": 0,
[2026-01-09 21:32:52]     "pilotErrorDiag": "",
[2026-01-09 21:32:52]  *** Listing of results directory ***
[2026-01-09 21:32:52] total 772032
[2026-01-09 21:32:52] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:32:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:48 run_atlas
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:48 job.xml
[2026-01-09 21:32:52] -rw-r--r--. 2 boincer umatlas 392145699 Jan  9 18:48 EVNT.47962006._000058.pool.root.1
[2026-01-09 21:32:52] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:48 shared
[2026-01-09 21:32:52] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 18:48 input.tar.gz
[2026-01-09 21:32:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:48 start_atlas.sh
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:48 boinc_lockfile
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 18:48 pandaJob.out
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas        57 Jan  9 18:48 setup.sh.local
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas    989374 Jan  9 18:48 agis_schedconf.cvmfs.json
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:32:52] drwx------. 5 boincer umatlas      4096 Jan  9 18:48 pilot3
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:04 boinc_task_state.xml
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas      7172 Jan  9 21:30 init_data.xml
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas 388612823 Jan  9 21:31 HITS.47962010._000618.pool.root.1
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas      1054 Jan  9 21:31 memory_monitor_summary.json
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas   1571665 Jan  9 21:31 log.47962010._000618.job.log.tgz.1
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas      8599 Jan  9 21:31 heartbeat.json
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas        95 Jan  9 21:32 pilot_heartbeat.json
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:32 boinc_mmap_file
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:32 wrapper_checkpoint.txt
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas      4824 Jan  9 21:32 pilotlog.txt
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas   1366550 Jan  9 21:32 log.47962010._000618.job.log.1
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas       353 Jan  9 21:32 output.list
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:32 runtime_log
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas   2959360 Jan  9 21:32 result.tar.gz
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas      9334 Jan  9 21:32 runtime_log.err
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas       658 Jan  9 21:32 ko1MDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrNhKDmQyBIim.diag
[2026-01-09 21:32:52] -rw-r--r--. 1 boincer umatlas     21711 Jan  9 21:32 stderr.txt
[2026-01-09 21:32:52] HITS file was successfully produced:
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas 388612823 Jan  9 21:31 shared/HITS.pool.root.1
[2026-01-09 21:32:52]  *** Contents of shared directory: ***
[2026-01-09 21:32:52] total 765960
[2026-01-09 21:32:52] -rw-r--r--. 2 boincer umatlas 392145699 Jan  9 18:48 ATLAS.root_0
[2026-01-09 21:32:52] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 18:48 input.tar.gz
[2026-01-09 21:32:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:48 start_atlas.sh
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas 388612823 Jan  9 21:31 HITS.pool.root.1
[2026-01-09 21:32:52] -rw-------. 1 boincer umatlas   2959360 Jan  9 21:32 result.tar.gz
21:32:53 (484091): run_atlas exited; CPU time 67804.914677
21:32:53 (484091): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN