Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 22:55:47 (307612): vboxwrapper version 26210
2026-01-09 22:55:47 (307612): BOINC client version: 8.2.8
2026-01-09 22:55:47 (307612): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-09 22:55:47 (307612): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 22:55:47 (307612): Create VM. (boinc_a01b824277b30761, slot#109)
2026-01-09 22:55:48 (307612): Setting Memory Size for VM. (4048MB)
2026-01-09 22:55:49 (307612): Setting CPU Count for VM. (1)
2026-01-09 22:55:49 (307612): Setting Chipset Options for VM.
2026-01-09 22:55:50 (307612): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 22:55:50 (307612): Setting Boot Options for VM.
2026-01-09 22:55:51 (307612): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 22:55:51 (307612): Enabling VM Network Access.
2026-01-09 22:55:52 (307612): Disabling USB Support for VM.
2026-01-09 22:55:52 (307612): Disabling COM Port Support for VM.
2026-01-09 22:55:53 (307612): Disabling LPT Port Support for VM.
2026-01-09 22:55:53 (307612): Disabling Audio Support for VM.
2026-01-09 22:55:54 (307612): Disabling Clipboard Support for VM.
2026-01-09 22:55:54 (307612): Disabling Drag and Drop Support for VM.
2026-01-09 22:55:55 (307612): Adding storage controller(s) to VM.
2026-01-09 22:55:55 (307612): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 22:55:56 (307612): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 22:55:57 (307612): forwarding host port 58715 to guest port 80
2026-01-09 22:55:57 (307612): Enabling remote desktop for VM.
2026-01-09 22:55:57 (307612): Enabling shared directory for VM.
2026-01-09 22:55:58 (307612): Starting VM using VBoxManage interface. (boinc_a01b824277b30761, slot#109)
2026-01-09 22:56:01 (307612): Successfully started VM. (PID = '308171')
2026-01-09 22:56:01 (307612): Reporting VM Process ID to BOINC.
2026-01-09 22:56:01 (307612): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-09 22:56:01 (307612): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 22:56:01 (307612): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 22:56:01 (307612): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 22:56:01 (307612): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 22:56:01 (307612): Detected: Web Application Enabled (http://localhost:58715)
2026-01-09 22:56:01 (307612): Detected: Remote Desktop Enabled (localhost:52461)
2026-01-09 22:56:01 (307612): Preference change detected
2026-01-09 22:56:01 (307612): Setting CPU throttle for VM. (100%)
2026-01-09 22:56:01 (307612): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 22:56:02 (307612): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 22:56:02 (307612): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 22:56:04 (307612): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 22:56:04 (307612): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 22:56:04 (307612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 22:56:09 (307612): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 22:56:09 (307612): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 22:56:24 (307612): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000296 main     Log opened 2026-01-09T21:56:22.467835000Z
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000480 main     OS Product: Linux
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000537 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000570 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000604 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000605 main     Process ID: 1241
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.000606 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 22:56:24 (307612): Guest Log: 00:00:00.002742 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 22:56:24 (307612): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 22:56:24 (307612): Guest Log: [INFO] Mounting shared directory
2026-01-09 22:56:24 (307612): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 22:56:26 (307612): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 22:56:26 (307612): Guest Log: [INFO] Detected branch: prod
2026-01-09 22:56:26 (307612): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 22:56:26 (307612): Guest Log: Copying input files
2026-01-09 22:56:28 (307612): Guest Log: Copied input files into RunAtlas.
2026-01-09 22:56:28 (307612): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-09 22:56:36 (307612): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 22:56:36 (307612): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 22:56:36 (307612): Guest Log: 2.6.3.0 1510 0 31524 154957 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-09 22:56:37 (307612): Guest Log: copied the webapp to /var/www
2026-01-09 22:56:37 (307612): Guest Log: core_number=1
2026-01-09 22:56:37 (307612): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 22:56:37 (307612): Guest Log:  *** Starting ATLAS job. (PandaID=6963383708 taskID=47929288) ***
2026-01-10 00:35:01 (307612): Status Report: Elapsed Time: '6000.000000'
2026-01-10 00:35:01 (307612): Status Report: CPU Time: '5904.510000'
2026-01-10 02:14:01 (307612): Status Report: Elapsed Time: '12000.000000'
2026-01-10 02:14:01 (307612): Status Report: CPU Time: '11845.770000'
2026-01-10 03:53:02 (307612): Status Report: Elapsed Time: '18000.000000'
2026-01-10 03:53:02 (307612): Status Report: CPU Time: '17787.180000'
2026-01-10 05:32:02 (307612): Status Report: Elapsed Time: '24000.000000'
2026-01-10 05:32:02 (307612): Status Report: CPU Time: '23728.300000'
2026-01-10 07:11:02 (307612): Status Report: Elapsed Time: '30000.000000'
2026-01-10 07:11:02 (307612): Status Report: CPU Time: '29668.690000'
2026-01-10 08:50:03 (307612): Status Report: Elapsed Time: '36000.000000'
2026-01-10 08:50:03 (307612): Status Report: CPU Time: '35609.180000'
2026-01-10 10:29:03 (307612): Status Report: Elapsed Time: '42000.000000'
2026-01-10 10:29:03 (307612): Status Report: CPU Time: '41549.620000'
2026-01-10 12:08:04 (307612): Status Report: Elapsed Time: '48000.000000'
2026-01-10 12:08:04 (307612): Status Report: CPU Time: '47490.300000'
2026-01-10 13:47:04 (307612): Status Report: Elapsed Time: '54000.000000'
2026-01-10 13:47:04 (307612): Status Report: CPU Time: '53430.690000'
2026-01-10 15:26:04 (307612): Status Report: Elapsed Time: '60000.000000'
2026-01-10 15:26:04 (307612): Status Report: CPU Time: '59371.900000'
2026-01-10 16:52:29 (307612): Guest Log:  *** Job finished ***
2026-01-10 16:52:29 (307612): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:15,598 | INFO     | all workflow threads have been joined
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:15,598 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:15,599 | INFO     | traces error code: 0
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:15,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,011 | INFO     | PID=5842 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,012 | INFO     | found 0 job(s) in 20 queues
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,013 | INFO     | [monitor] control thread has ended
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,147 [wrapper] ==== pilot stdout END ====
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,153 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,159 [wrapper] pilotpid: 5842
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,164 [wrapper] Pilot exit status: 0
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,214 [wrapper] pandaids: 6963383708
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,251 [wrapper] cleanup supervisor_pilot 29892 5843
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,257 [wrapper] Test setup, not cleaning
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,263 [wrapper] apfmon messages muted
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,269 [wrapper] ==== wrapper stdout END ====
2026-01-10 16:52:29 (307612): Guest Log: 2026-01-10 15:52:29,274 [wrapper] ==== wrapper stderr END ====
2026-01-10 16:52:29 (307612): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 16:52:29 (307612): Guest Log:     "exeErrorCode": 0,
2026-01-10 16:52:29 (307612): Guest Log:     "exeErrorDiag": "",
2026-01-10 16:52:29 (307612): Guest Log:     "pilotErrorCode": 0,
2026-01-10 16:52:29 (307612): Guest Log:     "pilotErrorDiag": "",
2026-01-10 16:52:29 (307612): Guest Log:  *** Listing of results directory ***
2026-01-10 16:52:29 (307612): Guest Log: total 200692
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 07:13 pilot3.tar.gz
2026-01-10 16:52:29 (307612): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 07:15 runpilot2-wrapper.sh
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 07:16 queuedata.json
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas    592404 Jan  9 21:56 input.tar.gz
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Jan  9 21:56 start_atlas.sh
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas      9779 Jan  9 21:56 init_data.xml
2026-01-10 16:52:29 (307612): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 21:56 EVNT.47929286._000018.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Jan  9 21:56 pandaJob.out
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas        50 Jan  9 21:56 setup.sh.local
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas    989398 Jan  9 21:56 agis_schedconf.cvmfs.json
2026-01-10 16:52:29 (307612): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 21:57 pilot3
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas 182246511 Jan 10 15:51 HITS.47929288._002253.pool.root.1
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 15:51 pilot_heartbeat.json
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas      1038 Jan 10 15:51 memory_monitor_summary.json
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 15:51 agis_ddmendpoints.agis.ALL.json
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas   1030588 Jan 10 15:51 log.47929288._002253.job.log.tgz.1
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas      7830 Jan 10 15:51 heartbeat.json
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas       744 Jan 10 15:52 pilotlog.txt
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas   8681653 Jan 10 15:52 log.47929288._002253.job.log.1
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 15:52 output.list
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 15:52 runtime_log
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas   9728000 Jan 10 15:52 result.tar.gz
2026-01-10 16:52:29 (307612): Guest Log: -rw-r--r--. 1 atlas atlas      9118 Jan 10 15:52 runtime_log.err
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas       659 Jan 10 15:52 ldeMDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsMhKDmiHqLjm.diag
2026-01-10 16:52:29 (307612): Guest Log: Looking for outputfile HITS.47929288._002253.pool.root.1
2026-01-10 16:52:29 (307612): Guest Log: HITS file was successfully produced
2026-01-10 16:52:29 (307612): Guest Log: -rw-------. 1 atlas atlas 182246511 Jan 10 15:51 /home/atlas/RunAtlas/HITS.47929288._002253.pool.root.1
2026-01-10 16:52:30 (307612): Guest Log: Successfully finished the ATLAS job!
2026-01-10 16:52:30 (307612): Guest Log: Copying the results back to the shared directory!
2026-01-10 16:52:30 (307612): Guest Log:  *** Contents of shared directory: ***
2026-01-10 16:52:30 (307612): Guest Log: total 256220
2026-01-10 16:52:30 (307612): Guest Log: -rw-r--r--. 1 root root 252013850 Jan  9 21:55 ATLAS.root_0
2026-01-10 16:52:30 (307612): Guest Log: -rw-r--r--. 1 root root      9779 Jan  9 21:55 init_data.xml
2026-01-10 16:52:30 (307612): Guest Log: -rw-r--r--. 1 root root    592404 Jan  9 21:55 input.tar.gz
2026-01-10 16:52:30 (307612): Guest Log: -rw-r--r--. 1 root root   9728000 Jan 10 15:52 result.tar.gz
2026-01-10 16:52:30 (307612): Guest Log: -rw-r--r--. 1 root root     15847 Jan  9 21:55 start_atlas.sh
2026-01-10 16:52:30 (307612): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 16:52:30 (307612): VM Completion File Detected.
2026-01-10 16:52:30 (307612): Powering off VM.
2026-01-10 16:52:31 (307612): Successfully stopped VM.
2026-01-10 16:52:31 (307612): Deregistering VM. (boinc_a01b824277b30761, slot#109)
2026-01-10 16:52:31 (307612): Removing network bandwidth throttle group from VM.
2026-01-10 16:52:32 (307612): Removing VM from VirtualBox.
2026-01-10 16:52:37 (307612): called boinc_finish(0)

</stderr_txt>
]]>

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