Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:08 (1775711): wrapper (7.7.26015): starting
16:54:08 (1775711): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:54:08] Arguments: --nthreads 8
[2026-01-09 16:54:08] Threads: 8
[2026-01-09 16:54:08] Checking for CVMFS
[2026-01-09 16:54:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:54:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:54:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:54:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:54:09] 2.13.3.0 12210 22844 147860 154957 2 678 34138491 40960001 30745 16776704 0 74176406 99.803 36869049 47429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 16:54:09] CVMFS is ok
[2026-01-09 16:54:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:54:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:54:09] Further information can be found at the LHC@home message board.
[2026-01-09 16:54:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:54:09] Checking for apptainer binary...
[2026-01-09 16:54:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:54:09] Running /usr/bin/apptainer --version
[2026-01-09 16:54:09] apptainer version 1.4.5-2.el9
[2026-01-09 16:54:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:54:09] c-208-37.aglt2.org
[2026-01-09 16:54:09] apptainer works
[2026-01-09 16:54:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:54:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:54:09] Starting ATLAS job with PandaID=6963195791
[2026-01-09 16:54:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:28:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:28:13] 2026-01-10 04:27:08,364 | INFO     | PID=1779521 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 23:28:13] 2026-01-10 04:27:08,364 | INFO     | .. there are 26 such processes running
[2026-01-09 23:28:13] 2026-01-10 04:27:08,605 | INFO     | monitor loop #1454: job 0:6963195791 is in state 'finished'
[2026-01-09 23:28:13] 2026-01-10 04:27:08,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:28:13] 2026-01-10 04:27:09,365 | INFO     | time since job start (23562s) is within the limit (349056.0s)
[2026-01-09 23:28:13] 2026-01-10 04:27:11,110 | INFO     | monitor loop #1455: job 0:6963195791 is in state 'finished'
[2026-01-09 23:28:13] 2026-01-10 04:27:11,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:28:13] 2026-01-10 04:27:11,376 | INFO     | time since job start (23564s) is within the limit (349056.0s)
[2026-01-09 23:28:13] 2026-01-10 04:27:13,383 | INFO     | time since job start (23566s) is within the limit (349056.0s)
[2026-01-09 23:28:13] 2026-01-10 04:27:13,615 | INFO     | monitor loop #1456: job 0:6963195791 is in state 'finished'
[2026-01-09 23:28:13] 2026-01-10 04:27:13,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:28:13] 2026-01-10 04:27:15,390 | INFO     | time since job start (23568s) is within the limit (349056.0s)
[2026-01-09 23:28:13] 2026-01-10 04:27:16,120 | INFO     | monitor loop #1457: job 0:6963195791 is in state 'finished'
[2026-01-09 23:28:13] 2026-01-10 04:27:16,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:28:13] 2026-01-10 04:27:17,397 | INFO     | time since job start (23570s) is within the limit (349056.0s)
[2026-01-09 23:28:13] 2026-01-10 04:27:18,625 | INFO     | monitor loop #1458: job 0:6963195791 is in state 'finished'
[2026-01-09 23:28:13] 2026-01-10 04:27:18,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,403 | INFO     | time since job start (23572s) is within the limit (349056.0s)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,600 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 23:28:13] 2026-01-10 04:27:19,609 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1344218749996
[2026-01-09 23:28:13] 2026-01-10 04:27:19,639 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963195791/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,639 | INFO     | extracted standard info from prmon json
[2026-01-09 23:28:13] 2026-01-10 04:27:19,639 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:28:13] 2026-01-10 04:27:19,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:28:13] 2026-01-10 04:27:19,648 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:28:13] 2026-01-10 04:27:19,649 | INFO     | sum of square deviations: 17695854246.649395
[2026-01-09 23:28:13] 2026-01-10 04:27:19,651 | INFO     | sum of deviations: 906236715877.74
[2026-01-09 23:28:13] 2026-01-10 04:27:19,651 | INFO     | mean x: 1768007461.8441558
[2026-01-09 23:28:13] 2026-01-10 04:27:19,651 | INFO     | mean y: 2747414.662337662
[2026-01-09 23:28:13] 2026-01-10 04:27:19,651 | INFO     | intersect: -90540113841.80173
[2026-01-09 23:28:13] 2026-01-10 04:27:19,652 | INFO     | chi2: 21.730207382015568
[2026-01-09 23:28:13] 2026-01-10 04:27:19,652 | INFO     | sum of square deviations: 17015555694.421143
[2026-01-09 23:28:13] 2026-01-10 04:27:19,666 | INFO     | sum of deviations: 1034416990045.579
[2026-01-09 23:28:13] 2026-01-10 04:27:19,666 | INFO     | mean x: 1768007309.368421
[2026-01-09 23:28:13] 2026-01-10 04:27:19,666 | INFO     | mean y: 2776173.931578947
[2026-01-09 23:28:13] 2026-01-10 04:27:19,666 | INFO     | intersect: -107478685623.7039
[2026-01-09 23:28:13] 2026-01-10 04:27:19,667 | INFO     | chi2: 18.338349936783743
[2026-01-09 23:28:13] 2026-01-10 04:27:19,667 | INFO     | current chi2=18.338349936783743 (change=15.608951104806327 %)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,667 | INFO     | right removable region: 379
[2026-01-09 23:28:13] 2026-01-10 04:27:19,667 | INFO     | sum of square deviations: 17015122594.421139
[2026-01-09 23:28:13] 2026-01-10 04:27:19,669 | INFO     | sum of deviations: 749760363344.2097
[2026-01-09 23:28:13] 2026-01-10 04:27:19,669 | INFO     | mean x: 1768007614.368421
[2026-01-09 23:28:13] 2026-01-10 04:27:19,669 | INFO     | mean y: 2782470.6842105263
[2026-01-09 23:28:13] 2026-01-10 04:27:19,669 | INFO     | intersect: -77903328636.55074
[2026-01-09 23:28:13] 2026-01-10 04:27:19,670 | INFO     | chi2: 16.389757687417752
[2026-01-09 23:28:13] 2026-01-10 04:27:19,670 | INFO     | current chi2=16.389757687417752 (change=24.576156134697992 %)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,670 | INFO     | left removable region: 10
[2026-01-09 23:28:13] 2026-01-10 04:27:19,674 | INFO     | sum of square deviations: 15579920349.875381
[2026-01-09 23:28:13] 2026-01-10 04:27:19,676 | INFO     | sum of deviations: 764815992042.3143
[2026-01-09 23:28:13] 2026-01-10 04:27:19,677 | INFO     | mean x: 1768007583.9241192
[2026-01-09 23:28:13] 2026-01-10 04:27:19,677 | INFO     | mean y: 2852365.5826558266
[2026-01-09 23:28:13] 2026-01-10 04:27:19,677 | INFO     | intersect: -86788379160.06993
[2026-01-09 23:28:13] 2026-01-10 04:27:19,677 | INFO     | chi2: 7.958328158770725
[2026-01-09 23:28:13] 2026-01-10 04:27:19,677 | INFO     | current memory leak: 49.09 B/s (using 369 data points, chi2=7.96)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,678 | INFO     | could have reported an average CPU frequency of 3793 MHz (16 samples)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | ..............................
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . Timing measurements:
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . get job = 0 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . initial setup = 2 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . payload setup = 32 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . stage-in = 0 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . payload execution = 23482 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . stage-out = 4 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,682 | INFO     | . log creation = 1 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,683 | INFO     | ..............................
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | 
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | job summary report
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | --------------------------------------------------
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | PanDA job id: 6963195791
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | task id: 47962010
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | errors: (none)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | pilot state: finished 
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | transexitcode: 0
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | exeerrorcode: 0
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | exeerrordiag: 
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | exitcode: 0
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | exitmsg: OK
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | cpuconsumptiontime: 69982 s
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | nevents: 450
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | neventsw: 0
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | pid: 1791969
[2026-01-09 23:28:13] 2026-01-10 04:27:19,807 | INFO     | pgrp: 1791969
[2026-01-09 23:28:13] 2026-01-10 04:27:19,808 | INFO     | corecount: 8
[2026-01-09 23:28:13] 2026-01-10 04:27:19,808 | INFO     | event service: False
[2026-01-09 23:28:13] 2026-01-10 04:27:19,808 | INFO     | sizes: {0: 2284620, 9: 2284882, 11: 2284910, 23519: 2320799, 23524: 2329793, 23526: 2329849, 23550: 2330223}
[2026-01-09 23:28:13] 2026-01-10 04:27:19,808 | INFO     | --------------------------------------------------
[2026-01-09 23:28:13] 2026-01-10 04:27:19,808 | INFO     | 
[2026-01-09 23:28:13] 2026-01-10 04:27:19,808 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | job 6963195791 has completed (purged errors)
[2026-01-09 23:28:13] 2026-01-10 04:27:19,843 | INFO     | overall cleanup function is called
[2026-01-09 23:28:13] 2026-01-10 04:27:20,857 | INFO     | --- collectZombieJob: --- 10, [1791969]
[2026-01-09 23:28:13] 2026-01-10 04:27:20,857 | INFO     | zombie collector waiting for pid 1791969
[2026-01-09 23:28:13] 2026-01-10 04:27:20,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:28:13] 2026-01-10 04:27:20,857 | INFO     | collected zombie processes
[2026-01-09 23:28:13] 2026-01-10 04:27:20,857 | INFO     | will attempt to kill all subprocesses of pid=1791969
[2026-01-09 23:28:13] 2026-01-10 04:27:21,891 | INFO     | process IDs to be killed: [1791969] (in reverse order)
[2026-01-09 23:28:13] 2026-01-10 04:27:22,241 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:28:13] 2026-01-10 04:27:22,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:28:13] 2026-01-10 04:27:22,270 | INFO     | did not find any defunct processes belonging to 1791969
[2026-01-09 23:28:13] 2026-01-10 04:27:22,292 | INFO     | did not find any defunct processes belonging to 1791969
[2026-01-09 23:28:13] 2026-01-10 04:27:22,293 | INFO     | ready for new job
[2026-01-09 23:28:13] 2026-01-10 04:27:22,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:28:13] 2026-01-10 04:27:22,295 | INFO     | ***************************************
[2026-01-09 23:28:13] 2026-01-10 04:27:22,295 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:28:13] 2026-01-10 04:27:22,295 | INFO     | ***************************************
[2026-01-09 23:28:13] 2026-01-10 04:27:22,295 | INFO     | 
[2026-01-09 23:28:13] 2026-01-10 04:27:22,299 | INFO     | architecture information:
[2026-01-09 23:28:13] 2026-01-10 04:27:22,300 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:28:13] 2026-01-10 04:27:22,331 | INFO     | cat /etc/os-release:
[2026-01-09 23:28:13] NAME="CentOS Linux"
[2026-01-09 23:28:13] VERSION="7 (Core)"
[2026-01-09 23:28:13] ID="centos"
[2026-01-09 23:28:13] ID_LIKE="rhel fedora"
[2026-01-09 23:28:13] VERSION_ID="7"
[2026-01-09 23:28:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:28:13] ANSI_COLOR="0;31"
[2026-01-09 23:28:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:28:13] HOME_URL="https://www.centos.org/"
[2026-01-09 23:28:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:28:13] 
[2026-01-09 23:28:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:28:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:28:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:28:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:28:13] 
[2026-01-09 23:28:13] 2026-01-10 04:27:22,332 | INFO     | ***************************************
[2026-01-09 23:28:13] 2026-01-10 04:27:22,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 23:28:13] 2026-01-10 04:27:22,898 | INFO     | sufficient remaining disk space (167686176768 B)
[2026-01-09 23:28:13] 2026-01-10 04:27:22,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:28:13] 2026-01-10 04:27:22,899 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:28:13] 2026-01-10 04:27:22,899 | INFO     | update_server=False
[2026-01-09 23:28:13] 2026-01-10 04:27:22,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:28:13] 2026-01-10 04:27:22,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:28:13] 2026-01-10 04:27:22,899 | INFO     | aborting loop
[2026-01-09 23:28:13] 2026-01-10 04:27:23,412 | INFO     | all payload control threads have been joined
[2026-01-09 23:28:13] 2026-01-10 04:27:23,873 | INFO     | all data control threads have been joined
[2026-01-09 23:28:13] 2026-01-10 04:27:23,905 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:23,905 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,015 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,035 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,167 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:28:13] 2026-01-10 04:27:24,420 | INFO     | [payload] control thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,437 | INFO     | all job control threads have been joined
[2026-01-09 23:28:13] 2026-01-10 04:27:24,482 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:28:13] 2026-01-10 04:27:24,530 | INFO     | [job] validate thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:28:13] 2026-01-10 04:27:24,879 | INFO     | [data] control thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:24,926 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:25,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:25,177 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:25,443 | INFO     | [job] control thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:25,836 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:26,235 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:28,533 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:28:13] 2026-01-10 04:27:53,340 | INFO     | PID=1779521 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:28:13] 2026-01-10 04:27:53,340 | INFO     | .. there are 26 such processes running
[2026-01-09 23:28:13] 2026-01-10 04:27:53,340 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:28:13] 2026-01-10 04:27:53,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:28:13] 2026-01-10 04:27:53,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:28:13] 2026-01-10 04:28:07,648 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:28:13] 2026-01-10 04:28:07,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111195526976)>', '<ExcThread(monitor, started 140110733494016)>']
[2026-01-09 23:28:13] 2026-01-10 04:28:08,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:28:13] 2026-01-10 04:28:08,433 | INFO     | [monitor] control thread has ended
[2026-01-09 23:28:13] 2026-01-10 04:28:12,680 | INFO     | all workflow threads have been joined
[2026-01-09 23:28:13] 2026-01-10 04:28:12,680 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:28:13] 2026-01-10 04:28:12,681 | INFO     | traces error code: 0
[2026-01-09 23:28:13] 2026-01-10 04:28:12,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:28:13] 2026-01-10 04:28:12,788 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:28:13] 2026-01-10 04:28:12,811 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:28:13] 2026-01-10 04:28:12,826 [wrapper] pilotpid: 1779521
[2026-01-09 23:28:13] 2026-01-10 04:28:12,841 [wrapper] Pilot exit status: 0
[2026-01-09 23:28:13] 2026-01-10 04:28:12,935 [wrapper] pandaids: 6963195791
[2026-01-09 23:28:13] 2026-01-10 04:28:13,081 [wrapper] cleanup supervisor_pilot  262746 1779522
[2026-01-09 23:28:13] 2026-01-10 04:28:13,102 [wrapper] Test setup, not cleaning
[2026-01-09 23:28:13] 2026-01-10 04:28:13,121 [wrapper] apfmon messages muted
[2026-01-09 23:28:13] 2026-01-10 04:28:13,132 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:28:13] 2026-01-10 04:28:13,175 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:28:13]  *** Error codes and diagnostics ***
[2026-01-09 23:28:13]     "exeErrorCode": 0,
[2026-01-09 23:28:13]     "exeErrorDiag": "",
[2026-01-09 23:28:13]     "pilotErrorCode": 0,
[2026-01-09 23:28:13]     "pilotErrorDiag": "",
[2026-01-09 23:28:13]  *** Listing of results directory ***
[2026-01-09 23:28:13] total 787316
[2026-01-09 23:28:13] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:28:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:54 run_atlas
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:54 job.xml
[2026-01-09 23:28:13] -rw-r--r--. 2 boincer umatlas 392145699 Jan  9 16:54 EVNT.47962006._000058.pool.root.1
[2026-01-09 23:28:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:54 start_atlas.sh
[2026-01-09 23:28:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:54 shared
[2026-01-09 23:28:13] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 16:54 input.tar.gz
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:54 boinc_lockfile
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 16:54 pandaJob.out
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas        57 Jan  9 16:54 setup.sh.local
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas    989398 Jan  9 16:54 agis_schedconf.cvmfs.json
[2026-01-09 23:28:13] drwx------. 5 boincer umatlas      4096 Jan  9 16:54 pilot3
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas       531 Jan  9 23:18 boinc_task_state.xml
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas      7185 Jan  9 23:21 init_data.xml
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas 400907143 Jan  9 23:26 HITS.47962010._000622.pool.root.1
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas      1071 Jan  9 23:26 memory_monitor_summary.json
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas   1558964 Jan  9 23:26 log.47962010._000622.job.log.tgz.1
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas        95 Jan  9 23:27 pilot_heartbeat.json
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas      8619 Jan  9 23:27 heartbeat.json
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:28 boinc_mmap_file
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas      4825 Jan  9 23:28 pilotlog.txt
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:28 wrapper_checkpoint.txt
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas   3060379 Jan  9 23:28 log.47962010._000622.job.log.1
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas       353 Jan  9 23:28 output.list
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:28 runtime_log
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas   4638720 Jan  9 23:28 result.tar.gz
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 23:28 runtime_log.err
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas       664 Jan  9 23:28 3z9MDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvNhKDm50skKm.diag
[2026-01-09 23:28:13] -rw-r--r--. 1 boincer umatlas     21736 Jan  9 23:28 stderr.txt
[2026-01-09 23:28:13] HITS file was successfully produced:
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas 400907143 Jan  9 23:26 shared/HITS.pool.root.1
[2026-01-09 23:28:13]  *** Contents of shared directory: ***
[2026-01-09 23:28:13] total 779600
[2026-01-09 23:28:13] -rw-r--r--. 2 boincer umatlas 392145699 Jan  9 16:54 ATLAS.root_0
[2026-01-09 23:28:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:54 start_atlas.sh
[2026-01-09 23:28:13] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 16:54 input.tar.gz
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas 400907143 Jan  9 23:26 HITS.pool.root.1
[2026-01-09 23:28:13] -rw-------. 1 boincer umatlas   4638720 Jan  9 23:28 result.tar.gz
23:28:14 (1775711): run_atlas exited; CPU time 70405.589789
23:28:14 (1775711): called boinc_finish(0)

</stderr_txt>
]]>

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