Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:34:40 (3488083): wrapper (7.7.26015): starting
03:34:40 (3488083): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 03:34:40] Arguments: --nthreads 12
[2026-01-12 03:34:40] Threads: 12
[2026-01-12 03:34:40] Checking for CVMFS
[2026-01-12 03:34:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:34:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:34:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:34:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:34:41] 2.13.3.0 40677 4182 49428 155038 2 253 3386097 4096001 7861 130560 0 21885800 99.975 367804 261 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-12 03:34:41] CVMFS is ok
[2026-01-12 03:34:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:34:41] Checking for apptainer binary...
[2026-01-12 03:34:41] apptainer is not installed, using version from CVMFS
[2026-01-12 03:34:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:34:43] epyc7v12
[2026-01-12 03:34:43] apptainer works
[2026-01-12 03:34:43] Set ATHENA_PROC_NUMBER=12
[2026-01-12 03:34:43] Set ATHENA_CORE_NUMBER=12
[2026-01-12 03:34:43] Starting ATLAS job with PandaID=6963383894
[2026-01-12 03:34:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31420/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 05:13:32]  *** The last 200 lines of the pilot log: ***
[2026-01-12 05:13:32] 2026-01-12 05:12:42,790 | INFO     | adding to output.list: log.47929288._002355.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/0a/log.47929288._002355.job.log.tg
[2026-01-12 05:13:32] 2026-01-12 05:12:42,792 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 05:13:32] 2026-01-12 05:12:42,792 | INFO     | summary of transferred files:
[2026-01-12 05:13:32] 2026-01-12 05:12:42,792 | INFO     |  -- lfn=log.47929288._002355.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 05:13:32] 2026-01-12 05:12:42,792 | INFO     | stage-out finished correctly
[2026-01-12 05:13:32] 2026-01-12 05:12:42,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 05:13:32] 2026-01-12 05:12:43,160 | INFO     | job 6963383894 has state=finished
[2026-01-12 05:13:32] 2026-01-12 05:12:43,160 | INFO     | preparing for final server update for job 6963383894 in state='finished'
[2026-01-12 05:13:32] 2026-01-12 05:12:43,164 | INFO     | this job has now completed (state=finished)
[2026-01-12 05:13:32] 2026-01-12 05:12:43,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 05:13:32] 2026-01-12 05:12:43,165 | INFO     | log transfer has been attempted: DONE
[2026-01-12 05:13:32] 2026-01-12 05:12:43,165 | INFO     | job 6963383894 has finished - writing final server update
[2026-01-12 05:13:32] 2026-01-12 05:12:43,165 | INFO     | total number of processed events: 400 (read)
[2026-01-12 05:13:32] 2026-01-12 05:12:43,168 | INFO     | executing command: lscpu
[2026-01-12 05:13:32] 2026-01-12 05:12:43,255 | INFO     | time since job start (5847s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:43,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 05:13:32] 2026-01-12 05:12:43,779 | WARNING  | process 3502428 can no longer be monitored (due to stat problems) - aborting
[2026-01-12 05:13:32] 2026-01-12 05:12:43,780 | INFO     | using path: /opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6963383894/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 05:13:32] 2026-01-12 05:12:44,901 | INFO     | number of running child processes to parent process 3502428: 1
[2026-01-12 05:13:32] 2026-01-12 05:12:44,901 | INFO     | maximum number of monitored processes: 6
[2026-01-12 05:13:32] 2026-01-12 05:12:45,267 | INFO     | time since job start (5849s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:47,273 | INFO     | time since job start (5851s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:47,406 | INFO     | monitor loop #395: job 0:6963383894 is in state 'finished'
[2026-01-12 05:13:32] 2026-01-12 05:12:47,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:13:32] 2026-01-12 05:12:49,281 | INFO     | time since job start (5853s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:49,910 | INFO     | monitor loop #396: job 0:6963383894 is in state 'finished'
[2026-01-12 05:13:32] 2026-01-12 05:12:49,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:13:32] 2026-01-12 05:12:51,287 | INFO     | time since job start (5855s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:52,426 | INFO     | monitor loop #397: job 0:6963383894 is in state 'finished'
[2026-01-12 05:13:32] 2026-01-12 05:12:52,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:13:32] 2026-01-12 05:12:53,296 | INFO     | time since job start (5857s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:54,931 | INFO     | monitor loop #398: job 0:6963383894 is in state 'finished'
[2026-01-12 05:13:32] 2026-01-12 05:12:54,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:13:32] 2026-01-12 05:12:55,304 | INFO     | time since job start (5859s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:57,309 | INFO     | time since job start (5861s) is within the limit (349056.0s)
[2026-01-12 05:13:32] 2026-01-12 05:12:57,440 | INFO     | monitor loop #399: job 0:6963383894 is in state 'finished'
[2026-01-12 05:13:32] 2026-01-12 05:12:57,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,117 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 05:13:32] 2026-01-12 05:12:58,173 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2541.683609374999
[2026-01-12 05:13:32] 2026-01-12 05:12:58,213 | INFO     | using path: /opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6963383894/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,214 | INFO     | extracted standard info from prmon json
[2026-01-12 05:13:32] 2026-01-12 05:12:58,214 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 05:13:32] 2026-01-12 05:12:58,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 05:13:32] 2026-01-12 05:12:58,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 05:13:32] 2026-01-12 05:12:58,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 05:13:32] 2026-01-12 05:12:58,216 | INFO     | fitting pss+swap vs Time
[2026-01-12 05:13:32] 2026-01-12 05:12:58,217 | INFO     | sum of square deviations: 211285822.0
[2026-01-12 05:13:32] 2026-01-12 05:12:58,217 | INFO     | sum of deviations: 169258346.99999994
[2026-01-12 05:13:32] 2026-01-12 05:12:58,217 | INFO     | mean x: 1768191944.5
[2026-01-12 05:13:32] 2026-01-12 05:12:58,217 | INFO     | mean y: 2729139.2045454546
[2026-01-12 05:13:32] 2026-01-12 05:12:58,217 | INFO     | intersect: -1413746622.7364788
[2026-01-12 05:13:32] 2026-01-12 05:12:58,218 | INFO     | chi2: 0.11697013509869149
[2026-01-12 05:13:32] 2026-01-12 05:12:58,218 | INFO     | current memory leak: 0.80 B/s (using 88 data points, chi2=0.12)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,218 | INFO     | could have reported an average CPU frequency of 2508 MHz (7 samples)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,218 | INFO     | ..............................
[2026-01-12 05:13:32] 2026-01-12 05:12:58,218 | INFO     | . Timing measurements:
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . get job = 0 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . initial setup = 2 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . payload setup = 18 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . stage-in = 0 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . payload execution = 5784 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . stage-out = 1 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | . log creation = 0 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,219 | INFO     | ..............................
[2026-01-12 05:13:32] 2026-01-12 05:12:58,331 | INFO     | 
[2026-01-12 05:13:32] 2026-01-12 05:12:58,331 | INFO     | job summary report
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | --------------------------------------------------
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | PanDA job id: 6963383894
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | task id: 47929288
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | errors: (none)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | pilot state: finished 
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | transexitcode: 0
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | exeerrorcode: 0
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | exeerrordiag: 
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | exitcode: 0
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | exitmsg: OK
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | cpuconsumptiontime: 42605 s
[2026-01-12 05:13:32] 2026-01-12 05:12:58,332 | INFO     | nevents: 400
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | neventsw: 0
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | pid: 3502428
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | pgrp: 3502428
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | corecount: 12
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | event service: False
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | sizes: {0: 2283819, 1: 2284018, 12: 2284018, 13: 2284308, 23: 2284364, 5806: 2311204, 5807: 2311331, 5808: 2320431, 5809: 2320487, 5824: 2320681}
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | --------------------------------------------------
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | 
[2026-01-12 05:13:32] 2026-01-12 05:12:58,333 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31420/slots/1
[2026-01-12 05:13:32] 2026-01-12 05:12:58,420 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,422 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 05:13:32] 2026-01-12 05:12:58,423 | INFO     | job 6963383894 has completed (purged errors)
[2026-01-12 05:13:32] 2026-01-12 05:12:58,423 | INFO     | overall cleanup function is called
[2026-01-12 05:13:32] 2026-01-12 05:12:59,440 | INFO     | --- collectZombieJob: --- 10, [3502428]
[2026-01-12 05:13:32] 2026-01-12 05:12:59,440 | INFO     | zombie collector waiting for pid 3502428
[2026-01-12 05:13:32] 2026-01-12 05:12:59,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 05:13:32] 2026-01-12 05:12:59,441 | INFO     | collected zombie processes
[2026-01-12 05:13:32] 2026-01-12 05:12:59,441 | INFO     | will attempt to kill all subprocesses of pid=3502428
[2026-01-12 05:13:32] 2026-01-12 05:13:00,351 | INFO     | process IDs to be killed: [3502428] (in reverse order)
[2026-01-12 05:13:32] 2026-01-12 05:13:00,938 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 05:13:32] 2026-01-12 05:13:00,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 05:13:32] 2026-01-12 05:13:00,985 | INFO     | did not find any defunct processes belonging to 3502428
[2026-01-12 05:13:32] 2026-01-12 05:13:01,016 | INFO     | did not find any defunct processes belonging to 3502428
[2026-01-12 05:13:32] 2026-01-12 05:13:01,016 | INFO     | ready for new job
[2026-01-12 05:13:32] 2026-01-12 05:13:01,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 05:13:32] 2026-01-12 05:13:01,019 | INFO     | ***************************************
[2026-01-12 05:13:32] 2026-01-12 05:13:01,019 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 05:13:32] 2026-01-12 05:13:01,019 | INFO     | ***************************************
[2026-01-12 05:13:32] 2026-01-12 05:13:01,019 | INFO     | 
[2026-01-12 05:13:32] 2026-01-12 05:13:01,028 | INFO     | architecture information:
[2026-01-12 05:13:32] 2026-01-12 05:13:01,030 | INFO     | executing command: cat /etc/os-release
[2026-01-12 05:13:32] 2026-01-12 05:13:01,085 | INFO     | cat /etc/os-release:
[2026-01-12 05:13:32] NAME="CentOS Linux"
[2026-01-12 05:13:32] VERSION="7 (Core)"
[2026-01-12 05:13:32] ID="centos"
[2026-01-12 05:13:32] ID_LIKE="rhel fedora"
[2026-01-12 05:13:32] VERSION_ID="7"
[2026-01-12 05:13:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 05:13:32] ANSI_COLOR="0;31"
[2026-01-12 05:13:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 05:13:32] HOME_URL="https://www.centos.org/"
[2026-01-12 05:13:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 05:13:32] 
[2026-01-12 05:13:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 05:13:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 05:13:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 05:13:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 05:13:32] 
[2026-01-12 05:13:32] 2026-01-12 05:13:01,086 | INFO     | ***************************************
[2026-01-12 05:13:32] 2026-01-12 05:13:01,588 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31420/slots/1
[2026-01-12 05:13:32] 2026-01-12 05:13:01,662 | INFO     | sufficient remaining disk space (387390111744 B)
[2026-01-12 05:13:32] 2026-01-12 05:13:01,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 05:13:32] 2026-01-12 05:13:01,663 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 05:13:32] 2026-01-12 05:13:01,663 | INFO     | update_server=False
[2026-01-12 05:13:32] 2026-01-12 05:13:01,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 05:13:32] 2026-01-12 05:13:01,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:13:32] 2026-01-12 05:13:01,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 05:13:32] 2026-01-12 05:13:01,665 | INFO     | aborting loop
[2026-01-12 05:13:32] 2026-01-12 05:13:01,795 | INFO     | all payload control threads have been joined
[2026-01-12 05:13:32] 2026-01-12 05:13:01,991 | INFO     | all job control threads have been joined
[2026-01-12 05:13:32] 2026-01-12 05:13:02,106 | INFO     | all data control threads have been joined
[2026-01-12 05:13:32] 2026-01-12 05:13:02,671 | INFO     | [job] job monitor thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:02,673 | INFO     | [job] retrieve thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:02,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 05:13:32] 2026-01-12 05:13:02,691 | INFO     | [job] validate thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:02,800 | INFO     | [payload] control thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:02,920 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:02,997 | INFO     | [job] control thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:03,011 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:03,112 | INFO     | [data] control thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:03,118 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:03,245 | INFO     | [payload] validate_post thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:03,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:03,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:13:32] 2026-01-12 05:13:03,680 | INFO     | [data] copytool_out thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:04,038 | INFO     | [data] copytool_in thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:04,090 | INFO     | [payload] failed_post thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:04,353 | INFO     | [job] queue monitor thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:06,706 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 05:13:32] 2026-01-12 05:13:25,266 | INFO     | [monitor] cgroup control has ended
[2026-01-12 05:13:32] 2026-01-12 05:13:25,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132136149608256)>', '<ExcThread(monitor, started 132135465772800)>']
[2026-01-12 05:13:32] 2026-01-12 05:13:29,360 | INFO     | 5866s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 05:13:32] 2026-01-12 05:13:30,442 | INFO     | all workflow threads have been joined
[2026-01-12 05:13:32] 2026-01-12 05:13:30,442 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 05:13:32] 2026-01-12 05:13:30,443 | INFO     | traces error code: 0
[2026-01-12 05:13:32] 2026-01-12 05:13:30,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 05:13:32] 2026-01-12 05:13:31,720 | INFO     | PID=3494586 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 05:13:32] 2026-01-12 05:13:31,721 | INFO     | .. there are 10 such processes running
[2026-01-12 05:13:32] 2026-01-12 05:13:31,721 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 05:13:32] 2026-01-12 05:13:31,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 05:13:32] 2026-01-12 05:13:31,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 05:13:32] 2026-01-12 05:13:31,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 05:13:32] 2026-01-12 05:13:31,721 | INFO     | [monitor] control thread has ended
[2026-01-12 05:13:32] 2026-01-12 05:13:31,979 [wrapper] ==== pilot stdout END ====
[2026-01-12 05:13:32] 2026-01-12 05:13:31,988 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 05:13:32] 2026-01-12 05:13:32,000 [wrapper] pilotpid: 3494586
[2026-01-12 05:13:32] 2026-01-12 05:13:32,007 [wrapper] Pilot exit status: 0
[2026-01-12 05:13:32] 2026-01-12 05:13:32,047 [wrapper] pandaids: 6963383894
[2026-01-12 05:13:32] 2026-01-12 05:13:32,250 [wrapper] cleanup supervisor_pilot 3695644 3494587
[2026-01-12 05:13:32] 2026-01-12 05:13:32,260 [wrapper] Test setup, not cleaning
[2026-01-12 05:13:32] 2026-01-12 05:13:32,271 [wrapper] apfmon messages muted
[2026-01-12 05:13:32] 2026-01-12 05:13:32,279 [wrapper] ==== wrapper stdout END ====
[2026-01-12 05:13:32] 2026-01-12 05:13:32,294 [wrapper] ==== wrapper stderr END ====
[2026-01-12 05:13:32]  *** Error codes and diagnostics ***
[2026-01-12 05:13:32]     "exeErrorCode": 0,
[2026-01-12 05:13:32]     "exeErrorDiag": "",
[2026-01-12 05:13:32]     "pilotErrorCode": 0,
[2026-01-12 05:13:32]     "pilotErrorDiag": "",
[2026-01-12 05:13:32]  *** Listing of results directory ***
[2026-01-12 05:13:32] total 431692
[2026-01-12 05:13:32] -rw-r--r-- 1 boinc boinc    579449 Jan  9 07:13 pilot3.tar.gz
[2026-01-12 05:13:32] -rwx------ 1 boinc boinc     36322 Jan  9 07:15 runpilot2-wrapper.sh
[2026-01-12 05:13:32] -rw-r--r-- 1 boinc boinc      5112 Jan  9 07:16 queuedata.json
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc       100 Jan 12 03:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 05:13:32] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 03:34 run_atlas
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc       105 Jan 12 03:34 job.xml
[2026-01-12 05:13:32] -rw-r--r-- 2 boinc boinc 251465997 Jan 12 03:34 EVNT.47929286._000072.pool.root.1
[2026-01-12 05:13:32] -rw-r--r-- 2 boinc boinc     15847 Jan 12 03:34 start_atlas.sh
[2026-01-12 05:13:32] drwxrwx--x 2 boinc boinc      4096 Jan 12 03:34 shared
[2026-01-12 05:13:32] -rw-r--r-- 2 boinc boinc    592402 Jan 12 03:34 input.tar.gz
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc      6557 Jan 12 03:34 init_data.xml
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc         0 Jan 12 03:34 boinc_setup_complete
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc         0 Jan 12 03:34 boinc_lockfile
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc      2550 Jan 12 03:34 pandaJob.out
[2026-01-12 05:13:32] -rw------- 1 boinc boinc    990058 Jan 12 03:35 agis_schedconf.cvmfs.json
[2026-01-12 05:13:32] -rw------- 1 boinc boinc   1516240 Jan 12 03:35 agis_ddmendpoints.agis.ALL.json
[2026-01-12 05:13:32] drwx------ 5 boinc boinc      4096 Jan 12 03:35 pilot3
[2026-01-12 05:13:32] -rw------- 1 boinc boinc 184173401 Jan 12 05:11 HITS.47929288._002355.pool.root.1
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc       530 Jan 12 05:11 boinc_task_state.xml
[2026-01-12 05:13:32] -rw------- 1 boinc boinc      1021 Jan 12 05:12 memory_monitor_summary.json
[2026-01-12 05:13:32] -rw------- 1 boinc boinc        95 Jan 12 05:12 pilot_heartbeat.json
[2026-01-12 05:13:32] -rw------- 1 boinc boinc    418569 Jan 12 05:12 log.47929288._002355.job.log.tgz.1
[2026-01-12 05:13:32] -rw------- 1 boinc boinc      7728 Jan 12 05:12 heartbeat.json
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc      8192 Jan 12 05:13 boinc_mmap_file
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc        27 Jan 12 05:13 wrapper_checkpoint.txt
[2026-01-12 05:13:32] -rw------- 1 boinc boinc       823 Jan 12 05:13 pilotlog.txt
[2026-01-12 05:13:32] -rw------- 1 boinc boinc    831449 Jan 12 05:13 log.47929288._002355.job.log.1
[2026-01-12 05:13:32] -rw------- 1 boinc boinc       357 Jan 12 05:13 output.list
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc       620 Jan 12 05:13 runtime_log
[2026-01-12 05:13:32] -rw------- 1 boinc boinc   1269760 Jan 12 05:13 result.tar.gz
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc      9167 Jan 12 05:13 runtime_log.err
[2026-01-12 05:13:32] -rw------- 1 boinc boinc       651 Jan 12 05:13 ozsLDmWtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeYmKDmxal7bm.diag
[2026-01-12 05:13:32] -rw-rw-r-- 1 boinc boinc     22238 Jan 12 05:13 stderr.txt
[2026-01-12 05:13:32] HITS file was successfully produced:
[2026-01-12 05:13:32] -rw------- 1 boinc boinc 184173401 Jan 12 05:11 shared/HITS.pool.root.1
[2026-01-12 05:13:32]  *** Contents of shared directory: ***
[2026-01-12 05:13:32] total 427280
[2026-01-12 05:13:32] -rw-r--r-- 2 boinc boinc 251465997 Jan 12 03:34 ATLAS.root_0
[2026-01-12 05:13:32] -rw-r--r-- 2 boinc boinc     15847 Jan 12 03:34 start_atlas.sh
[2026-01-12 05:13:32] -rw-r--r-- 2 boinc boinc    592402 Jan 12 03:34 input.tar.gz
[2026-01-12 05:13:32] -rw------- 1 boinc boinc 184173401 Jan 12 05:11 HITS.pool.root.1
[2026-01-12 05:13:32] -rw------- 1 boinc boinc   1269760 Jan 12 05:13 result.tar.gz
05:13:34 (3488083): run_atlas exited; CPU time 42872.345577
05:13:34 (3488083): called boinc_finish(0)

</stderr_txt>
]]>

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