Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
02:13:20 (4317): wrapper (7.7.26015): starting
02:13:20 (4317): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 02:13:20] Arguments: --nthreads 8
[2026-01-10 02:13:20] Threads: 8
[2026-01-10 02:13:20] Checking for CVMFS
[2026-01-10 02:13:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 02:13:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 02:13:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 02:13:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 02:13:20] 2.11.0.0 4111 129640 79832 154962 2 188 2638947 4096001 917 130560 2 6970045 99.307 11161322 637 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 02:13:20] CVMFS is ok
[2026-01-10 02:13:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 02:13:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 02:13:20] Further information can be found at the LHC@home message board.
[2026-01-10 02:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:13:20] Checking for apptainer binary...
[2026-01-10 02:13:20] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 02:13:20] apptainer is not installed, using version from CVMFS
[2026-01-10 02:13:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:13:21] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009847/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node330
[2026-01-10 02:13:21] apptainer works
[2026-01-10 02:13:21] Set ATHENA_PROC_NUMBER=8
[2026-01-10 02:13:21] Set ATHENA_CORE_NUMBER=8
[2026-01-10 02:13:21] Starting ATLAS job with PandaID=6963197051
[2026-01-10 02:13:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11009847/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 02:38:22] run_atlas: line 178:  4695 Bus error               (core dumped) $cmd > runtime_log 2> runtime_log.err
[2026-01-10 02:38:22] Job failed
[2026-01-10 02:38:22] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009847/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-01-10 02:38:22] ++ pwd
[2026-01-10 02:38:22] + export RUNTIME_CONFIG_DIR=/tmp/job_11009847/atlas/pilot/slots/0/
[2026-01-10 02:38:22] + RUNTIME_CONFIG_DIR=/tmp/job_11009847/atlas/pilot/slots/0/
[2026-01-10 02:38:22] + mv ATLAS.root_0 EVNT.47962006._000063.pool.root.1
[2026-01-10 02:38:22] + tar --strip-components=5 -xvf input.tar.gz
[2026-01-10 02:38:22] + umask 077
[2026-01-10 02:38:22] ++ date +%s
[2026-01-10 02:38:22] + ACCOUNTING_STARTTIME=1768007601
[2026-01-10 02:38:22] + echo 'Detecting resource accounting method available for the job.'
[2026-01-10 02:38:22] Detecting resource accounting method available for the job.
[2026-01-10 02:38:22] + JOB_ACCOUNTING=
[2026-01-10 02:38:22] + command -v arc-job-cgroup
[2026-01-10 02:38:22] + '[' -z '' ']'
[2026-01-10 02:38:22] + GNU_TIME=/usr/bin/time
[2026-01-10 02:38:22] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-01-10 02:38:22] Looking for /usr/bin/time tool for accounting measurements
[2026-01-10 02:38:22] + '[' '!' -z /usr/bin/time ']'
[2026-01-10 02:38:22] + /usr/bin/time --version
[2026-01-10 02:38:22] + echo 'GNU time found and will be used for job accounting.'
[2026-01-10 02:38:22] GNU time found and will be used for job accounting.
[2026-01-10 02:38:22] + JOB_ACCOUNTING=gnutime
[2026-01-10 02:38:22] + '[' -z gnutime ']'
[2026-01-10 02:38:22] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-01-10 02:38:22] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-01-10 02:38:22] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-01-09/BOINC_MCORE/6963197051.out
[2026-01-10 02:38:22] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-01-09/BOINC_MCORE/6963197051.out
[2026-01-10 02:38:22] + export PILOT_NOKILL=YES
[2026-01-10 02:38:22] + PILOT_NOKILL=YES
[2026-01-10 02:38:22] + export GRID_GLOBAL_JOBID=OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn
[2026-01-10 02:38:22] + GRID_GLOBAL_JOBID=OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn
[2026-01-10 02:38:22] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn
[2026-01-10 02:38:22] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn
[2026-01-10 02:38:22] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-01-10 02:38:22] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-01-10 02:38:22] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-01-10 02:38:22] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-01-10 02:38:22] ++ pwd
[2026-01-10 02:38:22] + RUNTIME_JOB_DIR=/tmp/job_11009847/atlas/pilot/slots/0
[2026-01-10 02:38:22] + RUNTIME_JOB_STDIN=/dev/null
[2026-01-10 02:38:22] ++ pwd
[2026-01-10 02:38:22] + RUNTIME_JOB_STDOUT=/tmp/job_11009847/atlas/pilot/slots/0/log.47962010._000724.job.log.1
[2026-01-10 02:38:22] ++ pwd
[2026-01-10 02:38:22] + RUNTIME_JOB_STDERR=/tmp/job_11009847/atlas/pilot/slots/0/log.47962010._000724.job.log.1
[2026-01-10 02:38:22] ++ pwd
[2026-01-10 02:38:22] + RUNTIME_JOB_DIAG=/tmp/job_11009847/atlas/pilot/slots/0.diag
[2026-01-10 02:38:22] + '[' '!' -z '' ']'
[2026-01-10 02:38:22] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-01-10 02:38:22] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-01-10 02:38:22] + RUNTIME_FRONTEND_SEES_NODE=
[2026-01-10 02:38:22] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-01-10 02:38:22] + '[' '!' -z '' ']'
[2026-01-10 02:38:22] + '[' -z yes ']'
[2026-01-10 02:38:22] ++ pwd
[2026-01-10 02:38:22] + RUNTIME_JOB_DIAG=/tmp/job_11009847/atlas/pilot/slots/0/OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn.diag
[2026-01-10 02:38:22] + runtimeenvironments=
[2026-01-10 02:38:22] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-01-10 02:38:22] + RTE_function_0 1
[2026-01-10 02:38:22] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-01-10 02:38:22] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-01-10 02:38:22] + export BOINC_APP=ATLAS
[2026-01-10 02:38:22] + BOINC_APP=ATLAS
[2026-01-10 02:38:22] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-01-10 02:38:22] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-01-10 02:38:22] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-01-10 02:38:22] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-01-10 02:38:22] + '[' -z 1 ']'
[2026-01-10 02:38:22] + '[' 1 == 1 ']'
[2026-01-10 02:38:22] + shift
[2026-01-10 02:38:22] + export SITE_NAME=BOINC
[2026-01-10 02:38:22] + SITE_NAME=BOINC
[2026-01-10 02:38:22] + export ATLAS_LOCAL_AREA=/tmp/job_11009847/atlas/pilot/slots/0/
[2026-01-10 02:38:22] + ATLAS_LOCAL_AREA=/tmp/job_11009847/atlas/pilot/slots/0/
[2026-01-10 02:38:22] + '[' -e /tmp/job_11009847/atlas/pilot/slots/0/init_data.xml ']'
[2026-01-10 02:38:22] + grep '<use_http_proxy/>' /tmp/job_11009847/atlas/pilot/slots/0/init_data.xml
[2026-01-10 02:38:22] + '[' 0 -ne 0 ']'
[2026-01-10 02:38:22] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-01-10 02:38:22] + '[' -f /etc/os-release ']'
[2026-01-10 02:38:22] +++ cat /etc/os-release
[2026-01-10 02:38:22] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-01-10 02:38:22] +++ NAME='CentOS Linux'
[2026-01-10 02:38:22] +++ VERSION='7 (Core)'
[2026-01-10 02:38:22] +++ ID=centos
[2026-01-10 02:38:22] +++ ID_LIKE='rhel fedora'
[2026-01-10 02:38:22] +++ VERSION_ID=7
[2026-01-10 02:38:22] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-01-10 02:38:22] +++ ANSI_COLOR='0;31'
[2026-01-10 02:38:22] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-01-10 02:38:22] +++ HOME_URL=https://www.centos.org/
[2026-01-10 02:38:22] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-01-10 02:38:22] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-01-10 02:38:22] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-01-10 02:38:22] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-01-10 02:38:22] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-01-10 02:38:22] ++ echo 'CentOS Linux 7 (Core)'
[2026-01-10 02:38:22] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-01-10 02:38:22] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-01-10 02:38:22] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-01-10 02:38:22] + HOME=/tmp/job_11009847/atlas/pilot/slots/0
[2026-01-10 02:38:22] + export HOME
[2026-01-10 02:38:22] + cd /tmp/job_11009847/atlas/pilot/slots/0
[2026-01-10 02:38:22] + '[' '!' -z '' ']'
[2026-01-10 02:38:22] + '[' -z '' ']'
[2026-01-10 02:38:22] ++ /bin/hostname -f
[2026-01-10 02:38:22] + nodename=hpc-node330.cm.cluster
[2026-01-10 02:38:22] + echo nodename=hpc-node330.cm.cluster
[2026-01-10 02:38:22] + echo Processors=2
[2026-01-10 02:38:22] + echo Nodecount=1
[2026-01-10 02:38:22] + echo Benchmark=HEPSPEC:1.0
[2026-01-10 02:38:22] + executable=./runpilot2-wrapper.sh
[2026-01-10 02:38:22] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-01-10 02:38:22] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-01-10 02:38:22] ++ head -n 1
[2026-01-10 02:38:22] ++ tr -d '\0'
[2026-01-10 02:38:22] + line1='#!/bin/bash'
[2026-01-10 02:38:22] ++ echo '#!/bin/bash'
[2026-01-10 02:38:22] ++ sed -n 's/^#! *//p'
[2026-01-10 02:38:22] + shebang=/bin/bash
[2026-01-10 02:38:22] ++ echo /bin/bash
[2026-01-10 02:38:22] ++ awk '{print $1}'
[2026-01-10 02:38:22] + interpreter=/bin/bash
[2026-01-10 02:38:22] + '[' /bin/bash = /usr/bin/env ']'
[2026-01-10 02:38:22] + '[' x/bin/bash = x ']'
[2026-01-10 02:38:22] + type /bin/bash
[2026-01-10 02:38:22] + '[' xgnutime = xgnutime ']'
[2026-01-10 02:38:22] + /usr/bin/time -o /tmp/job_11009847/atlas/pilot/slots/0/OUiKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmOhKDm398Ynn.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.2.19 -z -t --piloturl local --mute --container
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_7/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_7/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_7/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_6/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_6/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_6/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_5/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_5/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_5/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_4/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_4/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_4/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_3/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_3/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_3/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_2/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_2/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_2/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_1/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_1/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_1/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_0/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_0/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/worker_0/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/evt_counter/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/evt_counter/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/athenaMP-workers-EVNTtoHITS-sim/evt_counter/AthenaMP.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/PoolFileCatalog.xml.AthenaMP-saved
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/PoolFileCatalog.xml.BAK
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/log.EVNTtoHITS
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/prmon.log
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/PoolFileCatalog.xml
[2026-01-10 02:38:22] ./PanDA_Pilot-6963197051/pilotlog.txt
[2026-01-10 02:38:22] ./pilotlog.txt
[2026-01-10 02:38:22] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-01-10 02:38:22] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-01-10 02:38:22] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-01-10 02:38:22] ./pilot3/pilot/util/realtimelogger.py
[2026-01-10 02:38:22] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-01-10 02:38:22] ./pilot3/pilot/util/loggingsupport.py
[2026-01-10 02:38:22] ./log.47962010._000724.job.log.1
[2026-01-10 02:38:22] ./runtime_log.err
[2026-01-10 02:38:22] ./runtime_log
02:48:22 (4317): run_atlas exited; CPU time 0.189421
02:48:22 (4317): app exit status: 0x1
02:48:22 (4317): called boinc_finish(195)

</stderr_txt>
]]>

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