Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:00 (36479): wrapper (7.7.26015): starting
06:32:00 (36479): wrapper: running run_atlas (--nthreads 2)
[2026-01-10 06:32:00] Arguments: --nthreads 2
[2026-01-10 06:32:00] Threads: 2
[2026-01-10 06:32:00] Checking for CVMFS
[2026-01-10 06:32:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:32:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:32:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:32:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:32:01] 2.9.2.0 3553530 3656 59224 154969 3 56 19170659 36864000 0 130560 0 1747147 99.985 136874 7116 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 06:32:01] CVMFS is ok
[2026-01-10 06:32:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 06:32:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 06:32:01] Further information can be found at the LHC@home message board.
[2026-01-10 06:32:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:32:01] Checking for apptainer binary...
[2026-01-10 06:32:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:32:01] Running /usr/bin/apptainer --version
[2026-01-10 06:32:01] apptainer version 1.4.1-1.1
[2026-01-10 06:32:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:32:01] madmaxA277a
[2026-01-10 06:32:01] apptainer works
[2026-01-10 06:32:01] Set ATHENA_PROC_NUMBER=2
[2026-01-10 06:32:01] Set ATHENA_CORE_NUMBER=2
[2026-01-10 06:32:01] Starting ATLAS job with PandaID=6963379552
[2026-01-10 06:32:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:34:26]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:34:26] 2026-01-10 18:33:34,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:34:26] 2026-01-10 18:33:34,083 | INFO     | all data control threads have been joined
[2026-01-10 19:34:26] 2026-01-10 18:33:34,466 | INFO     | all job control threads have been joined
[2026-01-10 19:34:26] 2026-01-10 18:33:35,048 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,048 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,049 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,089 | INFO     | [data] control thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:34:26] 2026-01-10 18:33:35,180 | INFO     | all payload control threads have been joined
[2026-01-10 19:34:26] 2026-01-10 18:33:35,397 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,472 | INFO     | [job] control thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,495 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,656 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:35,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:34:26] 2026-01-10 18:33:36,074 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:36,152 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:36,186 | INFO     | [payload] control thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:36,337 | INFO     | [job] validate thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:36,485 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:36,617 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:37,143 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:33:39,905 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:34:26] 2026-01-10 18:34:04,168 | INFO     | PID=40193 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 19:34:26] 2026-01-10 18:34:04,168 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:34:26] 2026-01-10 18:34:04,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:34:26] 2026-01-10 18:34:04,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:34:26] 2026-01-10 18:34:19,776 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:34:26] 2026-01-10 18:34:20,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725361780544)>', '<ExcThread(monitor, started 139724865918720)>']
[2026-01-10 19:34:26] 2026-01-10 18:34:21,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:34:26] 2026-01-10 18:34:21,255 | INFO     | [monitor] control thread has ended
[2026-01-10 19:34:26] 2026-01-10 18:34:25,939 | INFO     | all workflow threads have been joined
[2026-01-10 19:34:26] 2026-01-10 18:34:25,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:34:26] 2026-01-10 18:34:25,942 | INFO     | traces error code: 0
[2026-01-10 19:34:26] 2026-01-10 18:34:25,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:34:26] 2026-01-10 18:34:25,986 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:34:26] 2026-01-10 18:34:25,988 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:34:26] 2026-01-10 18:34:25,991 [wrapper] pilotpid: 40193
[2026-01-10 19:34:26] 2026-01-10 18:34:25,993 [wrapper] Pilot exit status: 0
[2026-01-10 19:34:26] 2026-01-10 18:34:25,999 [wrapper] pandaids: 6963379552
[2026-01-10 19:34:26] 2026-01-10 18:34:26,012 [wrapper] cleanup supervisor_pilot  119798 40194
[2026-01-10 19:34:26] 2026-01-10 18:34:26,014 [wrapper] Test setup, not cleaning
[2026-01-10 19:34:26] 2026-01-10 18:34:26,016 [wrapper] apfmon messages muted
[2026-01-10 19:34:26] 2026-01-10 18:34:26,018 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:34:26] 2026-01-10 18:34:26,020 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:34:26]  *** Error codes and diagnostics ***
[2026-01-10 19:34:26]     "exeErrorCode": 0,
[2026-01-10 19:34:26]     "exeErrorDiag": "",
[2026-01-10 19:34:26]     "pilotErrorCode": 0,
[2026-01-10 19:34:26]     "pilotErrorDiag": "",
[2026-01-10 19:34:26]  *** Listing of results directory ***
[2026-01-10 19:34:26] total 1179232
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 19:34:26] -rwx------ 1 boinc boinc     36322 Jan  9 08:15 runpilot2-wrapper.sh
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:16 queuedata.json
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc       100 Jan 10 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:34:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 06:32 run_atlas
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc       105 Jan 10 06:32 job.xml
[2026-01-10 19:34:26] -rw-r--r-- 2 boinc boinc 392887092 Jan 10 06:32 EVNT.47962006._000016.pool.root.1
[2026-01-10 19:34:26] -rw-r--r-- 2 boinc boinc    592610 Jan 10 06:32 input.tar.gz
[2026-01-10 19:34:26] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:32 start_atlas.sh
[2026-01-10 19:34:26] drwxrwx--x 2 boinc boinc      4096 Jan 10 06:32 shared
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc         0 Jan 10 06:32 boinc_setup_complete
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc      6210 Jan 10 06:32 init_data.xml
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc         0 Jan 10 06:32 boinc_lockfile
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc      2892 Jan 10 06:32 pandaJob.out
[2026-01-10 19:34:26] -rw------- 1 boinc boinc    989374 Jan 10 06:32 agis_schedconf.cvmfs.json
[2026-01-10 19:34:26] drwx------ 5 boinc boinc      4096 Jan 10 06:32 pilot3
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc       531 Jan 10 19:30 boinc_task_state.xml
[2026-01-10 19:34:26] -rw------- 1 boinc boinc 795158454 Jan 10 19:33 HITS.47962010._001413.pool.root.1
[2026-01-10 19:34:26] -rw------- 1 boinc boinc      1024 Jan 10 19:33 memory_monitor_summary.json
[2026-01-10 19:34:26] -rw------- 1 boinc boinc   1516240 Jan 10 19:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:34:26] -rw------- 1 boinc boinc   1234061 Jan 10 19:33 log.47962010._001413.job.log.tgz.1
[2026-01-10 19:34:26] -rw------- 1 boinc boinc      8558 Jan 10 19:33 heartbeat.json
[2026-01-10 19:34:26] -rw------- 1 boinc boinc        95 Jan 10 19:34 pilot_heartbeat.json
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc        28 Jan 10 19:34 wrapper_checkpoint.txt
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc      8192 Jan 10 19:34 boinc_mmap_file
[2026-01-10 19:34:26] -rw------- 1 boinc boinc      4750 Jan 10 19:34 pilotlog.txt
[2026-01-10 19:34:26] -rw------- 1 boinc boinc   6557273 Jan 10 19:34 log.47962010._001413.job.log.1
[2026-01-10 19:34:26] -rw------- 1 boinc boinc       353 Jan 10 19:34 output.list
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc       620 Jan 10 19:34 runtime_log
[2026-01-10 19:34:26] -rw------- 1 boinc boinc   7813120 Jan 10 19:34 result.tar.gz
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc      8923 Jan 10 19:34 runtime_log.err
[2026-01-10 19:34:26] -rw------- 1 boinc boinc       670 Jan 10 19:34 LvKMDmHtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmALhKDmyqK2Um.diag
[2026-01-10 19:34:26] -rw-r--r-- 1 boinc boinc      6992 Jan 10 19:34 stderr.txt
[2026-01-10 19:34:26] HITS file was successfully produced:
[2026-01-10 19:34:26] -rw------- 1 boinc boinc 795158454 Jan 10 19:33 shared/HITS.pool.root.1
[2026-01-10 19:34:26]  *** Contents of shared directory: ***
[2026-01-10 19:34:26] total 1168440
[2026-01-10 19:34:26] -rw-r--r-- 2 boinc boinc 392887092 Jan 10 06:32 ATLAS.root_0
[2026-01-10 19:34:26] -rw-r--r-- 2 boinc boinc    592610 Jan 10 06:32 input.tar.gz
[2026-01-10 19:34:26] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:32 start_atlas.sh
[2026-01-10 19:34:26] -rw------- 1 boinc boinc 795158454 Jan 10 19:33 HITS.pool.root.1
[2026-01-10 19:34:26] -rw------- 1 boinc boinc   7813120 Jan 10 19:34 result.tar.gz
19:34:27 (36479): run_atlas exited; CPU time 93044.719598
19:34:27 (36479): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN