Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:10 (6005): wrapper (7.7.26015): starting
17:04:10 (6005): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:04:10] Arguments: --nthreads 8
[2026-01-09 17:04:10] Threads: 8
[2026-01-09 17:04:10] Checking for CVMFS
[2026-01-09 17:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:04:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:04:10] 2.11.2.0 2873 124335 87772 154957 3 58 17070474 20275200 1 130560 0 30989848 99.838 7322432 35785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:04:10] CVMFS is ok
[2026-01-09 17:04:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:04:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:04:10] Further information can be found at the LHC@home message board.
[2026-01-09 17:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:04:10] Checking for apptainer binary...
[2026-01-09 17:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:04:10] Running /usr/bin/apptainer --version
[2026-01-09 17:04:10] apptainer version 1.3.2-1.el7
[2026-01-09 17:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:04:12] c-115-13.aglt2.org
[2026-01-09 17:04:12] apptainer works
[2026-01-09 17:04:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:04:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:04:12] Starting ATLAS job with PandaID=6963383820
[2026-01-09 17:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:20:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:20:06] 2026-01-10 10:19:32,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,456 | INFO     | time since job start (44102s) is within the limit (349056.0s)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,639 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 05:20:06] 2026-01-10 10:19:32,643 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-10 05:20:06] 2026-01-10 10:19:32,644 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963383820/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,645 | INFO     | extracted standard info from prmon json
[2026-01-10 05:20:06] 2026-01-10 10:19:32,645 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:20:06] 2026-01-10 10:19:32,645 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:20:06] 2026-01-10 10:19:32,657 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:20:06] 2026-01-10 10:19:32,658 | INFO     | sum of square deviations: 117191089946.72218
[2026-01-10 05:20:06] 2026-01-10 10:19:32,672 | INFO     | sum of deviations: 898632076489.5865
[2026-01-10 05:20:06] 2026-01-10 10:19:32,672 | INFO     | mean x: 1768018324.4937758
[2026-01-10 05:20:06] 2026-01-10 10:19:32,672 | INFO     | mean y: 2885558.1300138314
[2026-01-10 05:20:06] 2026-01-10 10:19:32,672 | INFO     | intersect: -13554441871.231606
[2026-01-10 05:20:06] 2026-01-10 10:19:32,673 | INFO     | chi2: 5.67751118827076
[2026-01-10 05:20:06] 2026-01-10 10:19:32,674 | INFO     | sum of square deviations: 114776632627.99457
[2026-01-10 05:20:06] 2026-01-10 10:19:32,684 | INFO     | sum of deviations: 1123929910189.909
[2026-01-10 05:20:06] 2026-01-10 10:19:32,684 | INFO     | mean x: 1768018171.9972146
[2026-01-10 05:20:06] 2026-01-10 10:19:32,684 | INFO     | mean y: 2899776.454038997
[2026-01-10 05:20:06] 2026-01-10 10:19:32,684 | INFO     | intersect: -17310106013.735752
[2026-01-10 05:20:06] 2026-01-10 10:19:32,685 | INFO     | chi2: 2.857832828371694
[2026-01-10 05:20:06] 2026-01-10 10:19:32,685 | INFO     | current chi2=2.857832828371694 (change=49.66398596843409 %)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,686 | INFO     | sum of square deviations: 112395571284.24965
[2026-01-10 05:20:06] 2026-01-10 10:19:32,696 | INFO     | sum of deviations: 1180707683444.0652
[2026-01-10 05:20:06] 2026-01-10 10:19:32,697 | INFO     | mean x: 1768018019.5007012
[2026-01-10 05:20:06] 2026-01-10 10:19:32,697 | INFO     | mean y: 2903399.870967742
[2026-01-10 05:20:06] 2026-01-10 10:19:32,697 | INFO     | intersect: -18570003310.240364
[2026-01-10 05:20:06] 2026-01-10 10:19:32,698 | INFO     | chi2: 2.4661837260038975
[2026-01-10 05:20:06] 2026-01-10 10:19:32,698 | INFO     | current chi2=2.4661837260038975 (change=13.704409106075891 %)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,698 | INFO     | right removable region: 712
[2026-01-10 05:20:06] 2026-01-10 10:19:32,699 | INFO     | sum of square deviations: 114776414857.99445
[2026-01-10 05:20:06] 2026-01-10 10:19:32,709 | INFO     | sum of deviations: 702737858335.2489
[2026-01-10 05:20:06] 2026-01-10 10:19:32,709 | INFO     | mean x: 1768018476.9972146
[2026-01-10 05:20:06] 2026-01-10 10:19:32,709 | INFO     | mean y: 2897907.123955432
[2026-01-10 05:20:06] 2026-01-10 10:19:32,709 | INFO     | intersect: -10822091874.612823
[2026-01-10 05:20:06] 2026-01-10 10:19:32,710 | INFO     | chi2: 3.4315480697672527
[2026-01-10 05:20:06] 2026-01-10 10:19:32,710 | INFO     | current chi2=3.4315480697672527 (change=39.55893778146083 %)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,711 | INFO     | sum of square deviations: 112395179298.24965
[2026-01-10 05:20:06] 2026-01-10 10:19:32,721 | INFO     | sum of deviations: 663071806780.4731
[2026-01-10 05:20:06] 2026-01-10 10:19:32,722 | INFO     | mean x: 1768018629.4992988
[2026-01-10 05:20:06] 2026-01-10 10:19:32,722 | INFO     | mean y: 2900445.948106592
[2026-01-10 05:20:06] 2026-01-10 10:19:32,722 | INFO     | intersect: -10427469561.049986
[2026-01-10 05:20:06] 2026-01-10 10:19:32,722 | INFO     | chi2: 3.4019053418428946
[2026-01-10 05:20:06] 2026-01-10 10:19:32,723 | INFO     | current chi2=3.4019053418428946 (change=0.8638295988191886 %)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,723 | INFO     | left removable region: 20
[2026-01-10 05:20:06] 2026-01-10 10:19:32,723 | INFO     | sum of square deviations: 102753850644.92899
[2026-01-10 05:20:06] 2026-01-10 10:19:32,733 | INFO     | sum of deviations: 865787318113.6376
[2026-01-10 05:20:06] 2026-01-10 10:19:32,733 | INFO     | mean x: 1768018599.0101156
[2026-01-10 05:20:06] 2026-01-10 10:19:32,733 | INFO     | mean y: 2923692.9089595377
[2026-01-10 05:20:06] 2026-01-10 10:19:32,733 | INFO     | intersect: -14894114925.152231
[2026-01-10 05:20:06] 2026-01-10 10:19:32,734 | INFO     | chi2: 0.1267164782206352
[2026-01-10 05:20:06] 2026-01-10 10:19:32,734 | INFO     | current memory leak: 8.43 B/s (using 692 data points, chi2=0.13)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,734 | INFO     | could have reported an average CPU frequency of 2353 MHz (28 samples)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,734 | INFO     | ..............................
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . Timing measurements:
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . get job = 0 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . initial setup = 2 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . payload setup = 10 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . stage-in = 0 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . payload execution = 44057 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . stage-out = 3 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,735 | INFO     | . log creation = 0 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,736 | INFO     | ..............................
[2026-01-10 05:20:06] 2026-01-10 10:19:32,820 | INFO     | 
[2026-01-10 05:20:06] 2026-01-10 10:19:32,820 | INFO     | job summary report
[2026-01-10 05:20:06] 2026-01-10 10:19:32,820 | INFO     | --------------------------------------------------
[2026-01-10 05:20:06] 2026-01-10 10:19:32,820 | INFO     | PanDA job id: 6963383820
[2026-01-10 05:20:06] 2026-01-10 10:19:32,820 | INFO     | task id: 47962010
[2026-01-10 05:20:06] 2026-01-10 10:19:32,821 | INFO     | errors: (none)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,821 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:20:06] 2026-01-10 10:19:32,821 | INFO     | pilot state: finished 
[2026-01-10 05:20:06] 2026-01-10 10:19:32,821 | INFO     | transexitcode: 0
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | exeerrorcode: 0
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | exeerrordiag: 
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | exitcode: 0
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | exitmsg: OK
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | cpuconsumptiontime: 342593 s
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | nevents: 900
[2026-01-10 05:20:06] 2026-01-10 10:19:32,822 | INFO     | neventsw: 0
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | pid: 16172
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | pgrp: 16172
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | corecount: 8
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | event service: False
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | sizes: {0: 2284453, 1: 2284652, 7: 2284914, 12: 2284942, 44071: 2330656, 44075: 2339650, 44078: 2339834, 44086: 2340080}
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | --------------------------------------------------
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | 
[2026-01-10 05:20:06] 2026-01-10 10:19:32,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 05:20:06] 2026-01-10 10:19:32,853 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,854 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,854 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,854 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,856 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:20:06] 2026-01-10 10:19:32,857 | INFO     | job 6963383820 has completed (purged errors)
[2026-01-10 05:20:06] 2026-01-10 10:19:32,857 | INFO     | overall cleanup function is called
[2026-01-10 05:20:06] 2026-01-10 10:19:33,873 | INFO     | --- collectZombieJob: --- 10, [16172]
[2026-01-10 05:20:06] 2026-01-10 10:19:33,873 | INFO     | zombie collector waiting for pid 16172
[2026-01-10 05:20:06] 2026-01-10 10:19:33,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:20:06] 2026-01-10 10:19:33,873 | INFO     | collected zombie processes
[2026-01-10 05:20:06] 2026-01-10 10:19:33,873 | INFO     | will attempt to kill all subprocesses of pid=16172
[2026-01-10 05:20:06] 2026-01-10 10:19:33,958 | INFO     | process IDs to be killed: [16172] (in reverse order)
[2026-01-10 05:20:06] 2026-01-10 10:19:34,015 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:20:06] 2026-01-10 10:19:34,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:20:06] 2026-01-10 10:19:34,020 | INFO     | did not find any defunct processes belonging to 16172
[2026-01-10 05:20:06] 2026-01-10 10:19:34,024 | INFO     | did not find any defunct processes belonging to 16172
[2026-01-10 05:20:06] 2026-01-10 10:19:34,024 | INFO     | ready for new job
[2026-01-10 05:20:06] 2026-01-10 10:19:34,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:20:06] 2026-01-10 10:19:34,027 | INFO     | ***************************************
[2026-01-10 05:20:06] 2026-01-10 10:19:34,027 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:20:06] 2026-01-10 10:19:34,027 | INFO     | ***************************************
[2026-01-10 05:20:06] 2026-01-10 10:19:34,027 | INFO     | 
[2026-01-10 05:20:06] 2026-01-10 10:19:34,028 | INFO     | architecture information:
[2026-01-10 05:20:06] 2026-01-10 10:19:34,029 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:20:06] 2026-01-10 10:19:34,047 | INFO     | cat /etc/os-release:
[2026-01-10 05:20:06] NAME="CentOS Linux"
[2026-01-10 05:20:06] VERSION="7 (Core)"
[2026-01-10 05:20:06] ID="centos"
[2026-01-10 05:20:06] ID_LIKE="rhel fedora"
[2026-01-10 05:20:06] VERSION_ID="7"
[2026-01-10 05:20:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:20:06] ANSI_COLOR="0;31"
[2026-01-10 05:20:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:20:06] HOME_URL="https://www.centos.org/"
[2026-01-10 05:20:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:20:06] 
[2026-01-10 05:20:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:20:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:20:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:20:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:20:06] 
[2026-01-10 05:20:06] 2026-01-10 10:19:34,047 | INFO     | ***************************************
[2026-01-10 05:20:06] 2026-01-10 10:19:34,101 [wrapper] supervise_pilot (15 min periods counter: 50)
[2026-01-10 05:20:06] 2026-01-10 10:19:34,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 05:20:06] 2026-01-10 10:19:34,571 | INFO     | sufficient remaining disk space (17607688192 B)
[2026-01-10 05:20:06] 2026-01-10 10:19:34,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:20:06] 2026-01-10 10:19:34,572 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:20:06] 2026-01-10 10:19:34,572 | INFO     | update_server=False
[2026-01-10 05:20:06] 2026-01-10 10:19:34,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:20:06] 2026-01-10 10:19:34,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:20:06] 2026-01-10 10:19:34,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:20:06] 2026-01-10 10:19:34,900 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 05:20:06] 2026-01-10 10:19:34,900 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 05:20:06] 2026-01-10 10:19:34,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:20:06] 2026-01-10 10:19:34,900 | INFO     | will abort loop
[2026-01-10 05:20:06] 2026-01-10 10:19:35,125 | INFO     | all data control threads have been joined
[2026-01-10 05:20:06] 2026-01-10 10:19:35,432 | INFO     | all payload control threads have been joined
[2026-01-10 05:20:06] 2026-01-10 10:19:35,573 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:35,577 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:35,625 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:35,662 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:35,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:20:06] 2026-01-10 10:19:35,900 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:35,901 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,131 | INFO     | [data] control thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,273 | INFO     | all job control threads have been joined
[2026-01-10 05:20:06] 2026-01-10 10:19:36,438 | INFO     | [payload] control thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,571 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,750 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,813 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,886 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:36,887 | INFO     | [job] validate thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:37,054 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:37,278 | INFO     | [job] control thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:39,844 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:20:06] 2026-01-10 10:19:42,641 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:20:06] 2026-01-10 10:19:44,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879608563520)>', '<ExcThread(monitor, started 139879031764736)>']
[2026-01-10 05:20:06] 2026-01-10 10:19:49,521 | INFO     | all workflow threads have been joined
[2026-01-10 05:20:06] 2026-01-10 10:19:49,522 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:20:06] 2026-01-10 10:19:49,522 | INFO     | traces error code: 0
[2026-01-10 05:20:06] 2026-01-10 10:19:49,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:20:06] 2026-01-10 10:20:05,667 | INFO     | PID=9686 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 05:20:06] 2026-01-10 10:20:05,668 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:20:06] 2026-01-10 10:20:05,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:20:06] 2026-01-10 10:20:05,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:20:06] 2026-01-10 10:20:05,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:20:06] 2026-01-10 10:20:05,668 | INFO     | [monitor] control thread has ended
[2026-01-10 05:20:06] 2026-01-10 10:20:05,759 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:20:06] 2026-01-10 10:20:05,764 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:20:06] 2026-01-10 10:20:05,769 [wrapper] pilotpid: 9686
[2026-01-10 05:20:06] 2026-01-10 10:20:05,775 [wrapper] Pilot exit status: 0
[2026-01-10 05:20:06] 2026-01-10 10:20:05,791 [wrapper] pandaids: 6963383820
[2026-01-10 05:20:06] 2026-01-10 10:20:05,833 [wrapper] cleanup supervisor_pilot  9917 9687
[2026-01-10 05:20:06] 2026-01-10 10:20:05,838 [wrapper] Test setup, not cleaning
[2026-01-10 05:20:06] 2026-01-10 10:20:05,843 [wrapper] apfmon messages muted
[2026-01-10 05:20:06] 2026-01-10 10:20:05,848 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:20:06] 2026-01-10 10:20:05,853 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:20:06]  *** Error codes and diagnostics ***
[2026-01-10 05:20:06]     "exeErrorCode": 0,
[2026-01-10 05:20:06]     "exeErrorDiag": "",
[2026-01-10 05:20:06]     "pilotErrorCode": 0,
[2026-01-10 05:20:06]     "pilotErrorDiag": "",
[2026-01-10 05:20:06]  *** Listing of results directory ***
[2026-01-10 05:20:06] total 1187180
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 05:20:06] -rwx------ 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas       100 Jan  9 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:20:06] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 17:04 run_atlas
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas       105 Jan  9 17:04 job.xml
[2026-01-10 05:20:06] -rw-r--r-- 2 boincer umatlas 391755878 Jan  9 17:04 EVNT.47962006._000126.pool.root.1
[2026-01-10 05:20:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:04 start_atlas.sh
[2026-01-10 05:20:06] drwxrwx--x 2 boincer umatlas      4096 Jan  9 17:04 shared
[2026-01-10 05:20:06] -rw-r--r-- 2 boincer umatlas    592612 Jan  9 17:04 input.tar.gz
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas         0 Jan  9 17:04 boinc_lockfile
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas      2893 Jan  9 17:04 pandaJob.out
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas        57 Jan  9 17:04 setup.sh.local
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas    989398 Jan  9 17:04 agis_schedconf.cvmfs.json
[2026-01-10 05:20:06] drwx------ 5 boincer umatlas      4096 Jan  9 17:04 pilot3
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas       533 Jan 10 05:10 boinc_task_state.xml
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas      5911 Jan 10 05:13 init_data.xml
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas 803924113 Jan 10 05:18 HITS.47962010._001808.pool.root.1
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas      1061 Jan 10 05:19 memory_monitor_summary.json
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas   1516240 Jan 10 05:19 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas   1943381 Jan 10 05:19 log.47962010._001808.job.log.tgz.1
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas        95 Jan 10 05:19 pilot_heartbeat.json
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas      8655 Jan 10 05:19 heartbeat.json
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas        29 Jan 10 05:19 wrapper_checkpoint.txt
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 05:19 boinc_mmap_file
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas       744 Jan 10 05:20 pilotlog.txt
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas   6094693 Jan 10 05:20 log.47962010._001808.job.log.1
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas       353 Jan 10 05:20 output.list
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas       620 Jan 10 05:20 runtime_log
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas   8058880 Jan 10 05:20 result.tar.gz
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas       668 Jan 10 05:20 D9GLDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMMhKDmo8yH6n.diag
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 05:20 runtime_log.err
[2026-01-10 05:20:06] -rw-r--r-- 1 boincer umatlas     21184 Jan 10 05:20 stderr.txt
[2026-01-10 05:20:06] HITS file was successfully produced:
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas 803924113 Jan 10 05:18 shared/HITS.pool.root.1
[2026-01-10 05:20:06]  *** Contents of shared directory: ***
[2026-01-10 05:20:06] total 1176132
[2026-01-10 05:20:06] -rw-r--r-- 2 boincer umatlas 391755878 Jan  9 17:04 ATLAS.root_0
[2026-01-10 05:20:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:04 start_atlas.sh
[2026-01-10 05:20:06] -rw-r--r-- 2 boincer umatlas    592612 Jan  9 17:04 input.tar.gz
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas 803924113 Jan 10 05:18 HITS.pool.root.1
[2026-01-10 05:20:06] -rw------- 1 boincer umatlas   8058880 Jan 10 05:20 result.tar.gz
05:20:07 (6005): run_atlas exited; CPU time 339492.618880
05:20:07 (6005): called boinc_finish(0)

</stderr_txt>
]]>

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