Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:06 (16860): wrapper (7.7.26015): starting
05:45:06 (16860): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 05:45:06] Arguments: --nthreads 8
[2026-01-10 05:45:06] Threads: 8
[2026-01-10 05:45:06] Checking for CVMFS
[2026-01-10 05:45:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:45:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:45:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:45:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:45:09] 2.11.2.0 25293 36374 132196 154968 2 101 13451841 25165825 1090 130560 0 13893561 99.790 9218271 3454 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 05:45:09] CVMFS is ok
[2026-01-10 05:45:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:45:09] Checking for apptainer binary...
[2026-01-10 05:45:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:45:09] Running /usr/bin/apptainer --version
[2026-01-10 05:45:09] apptainer version 1.3.2-1.el7
[2026-01-10 05:45:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:45:17] cg-vwn372.simple-grid.lan
[2026-01-10 05:45:17] apptainer works
[2026-01-10 05:45:17] Set ATHENA_PROC_NUMBER=8
[2026-01-10 05:45:17] Set ATHENA_CORE_NUMBER=8
[2026-01-10 05:45:17] Starting ATLAS job with PandaID=6963383909
[2026-01-10 05:45:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:01:12]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:01:12] 2026-01-10 08:00:06,347 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 09:01:12] 2026-01-10 08:00:06,349 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963383909/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,350 | INFO     | extracted standard info from prmon json
[2026-01-10 09:01:12] 2026-01-10 08:00:06,350 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:01:12] 2026-01-10 08:00:06,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:01:12] 2026-01-10 08:00:06,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 09:01:12] 2026-01-10 08:00:06,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 09:01:12] 2026-01-10 08:00:06,355 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:01:12] 2026-01-10 08:00:06,355 | INFO     | sum of square deviations: 1719429448.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,356 | INFO     | sum of deviations: 87160061914.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,356 | INFO     | mean x: 1768026497.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,367 | INFO     | mean y: 2403490.2768361582
[2026-01-10 09:01:12] 2026-01-10 08:00:06,367 | INFO     | intersect: -89621104542.20425
[2026-01-10 09:01:12] 2026-01-10 08:00:06,367 | INFO     | chi2: 7.319142931322922
[2026-01-10 09:01:12] 2026-01-10 08:00:06,368 | INFO     | sum of square deviations: 1577789583.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,369 | INFO     | sum of deviations: 96021955162.50002
[2026-01-10 09:01:12] 2026-01-10 08:00:06,369 | INFO     | mean x: 1768026344.5
[2026-01-10 09:01:12] 2026-01-10 08:00:06,369 | INFO     | mean y: 2412741.215116279
[2026-01-10 09:01:12] 2026-01-10 08:00:06,369 | INFO     | intersect: -107597072137.4335
[2026-01-10 09:01:12] 2026-01-10 08:00:06,370 | INFO     | chi2: 6.620394219056086
[2026-01-10 09:01:12] 2026-01-10 08:00:06,370 | INFO     | current chi2=6.620394219056086 (change=9.546865238503251 %)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,370 | INFO     | right removable region: 171
[2026-01-10 09:01:12] 2026-01-10 08:00:06,370 | INFO     | sum of square deviations: 1577789583.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,371 | INFO     | sum of deviations: 26170085037.5
[2026-01-10 09:01:12] 2026-01-10 08:00:06,371 | INFO     | mean x: 1768026649.5
[2026-01-10 09:01:12] 2026-01-10 08:00:06,372 | INFO     | mean y: 2469106.25
[2026-01-10 09:01:12] 2026-01-10 08:00:06,372 | INFO     | intersect: -29322992453.71595
[2026-01-10 09:01:12] 2026-01-10 08:00:06,372 | INFO     | chi2: 2.3001583378196737
[2026-01-10 09:01:12] 2026-01-10 08:00:06,372 | INFO     | current chi2=2.3001583378196737 (change=68.57339227553622 %)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,372 | INFO     | sum of square deviations: 1444149868.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,374 | INFO     | sum of deviations: -4769576519.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,374 | INFO     | mean x: 1768026802.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,374 | INFO     | mean y: 2504123.568862275
[2026-01-10 09:01:12] 2026-01-10 08:00:06,374 | INFO     | intersect: 5841745123.853926
[2026-01-10 09:01:12] 2026-01-10 08:00:06,374 | INFO     | chi2: 0.82891458058599
[2026-01-10 09:01:12] 2026-01-10 08:00:06,374 | INFO     | current chi2=0.82891458058599 (change=63.96271652447542 %)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,375 | INFO     | sum of square deviations: 1318277740.5
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | sum of deviations: -7692395057.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | mean x: 1768026954.5
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | mean y: 2507639.777777778
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | intersect: 10319272755.05628
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | chi2: 0.8151528270811468
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | current chi2=0.8151528270811468 (change=1.6602137092478846 %)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,376 | INFO     | left removable region: 30
[2026-01-10 09:01:12] 2026-01-10 08:00:06,377 | INFO     | sum of square deviations: 869188390.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,378 | INFO     | sum of deviations: 1758379290.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,378 | INFO     | mean x: 1768027229.0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,378 | INFO     | mean y: 2523073.8936170214
[2026-01-10 09:01:12] 2026-01-10 08:00:06,378 | INFO     | intersect: -3574218745.7131624
[2026-01-10 09:01:12] 2026-01-10 08:00:06,378 | INFO     | chi2: 0.00011365110865973162
[2026-01-10 09:01:12] 2026-01-10 08:00:06,378 | INFO     | current memory leak: 2.02 B/s (using 141 data points, chi2=0.00)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | ..............................
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | . Timing measurements:
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | . get job = 0 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | . initial setup = 11 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | . payload setup = 141 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | . stage-in = 0 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,379 | INFO     | . payload execution = 10940 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,380 | INFO     | . stage-out = 3 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,380 | INFO     | . log creation = 1 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,380 | INFO     | ..............................
[2026-01-10 09:01:12] 2026-01-10 08:00:06,508 | INFO     | 
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | job summary report
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | --------------------------------------------------
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | PanDA job id: 6963383909
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | task id: 47929288
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | errors: (none)
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | pilot state: finished 
[2026-01-10 09:01:12] 2026-01-10 08:00:06,509 | INFO     | transexitcode: 0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | exeerrorcode: 0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | exeerrordiag: 
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | exitcode: 0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | exitmsg: OK
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | cpuconsumptiontime: 54252 s
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | nevents: 400
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | neventsw: 0
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | pid: 27166
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | pgrp: 27166
[2026-01-10 09:01:12] 2026-01-10 08:00:06,510 | INFO     | corecount: 8
[2026-01-10 09:01:12] 2026-01-10 08:00:06,511 | INFO     | event service: False
[2026-01-10 09:01:12] 2026-01-10 08:00:06,511 | INFO     | sizes: {0: 2283797, 1: 2283996, 12: 2283996, 23: 2284024, 33: 2284052, 44: 2284108, 55: 2284264, 65: 2284292, 76: 2284320, 87: 2284376, 98: 2284404, 108: 2284914, 
[2026-01-10 09:01:12] 2026-01-10 08:00:06,511 | INFO     | --------------------------------------------------
[2026-01-10 09:01:12] 2026-01-10 08:00:06,511 | INFO     | 
[2026-01-10 09:01:12] 2026-01-10 08:00:06,511 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-10 09:01:12] 2026-01-10 08:00:06,729 | INFO     | time since job start (11425s) is within the limit (349056.0s)
[2026-01-10 09:01:12] 2026-01-10 08:00:07,046 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,048 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:01:12] 2026-01-10 08:00:07,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:01:12] 2026-01-10 08:00:07,049 | INFO     | job 6963383909 has completed (purged errors)
[2026-01-10 09:01:12] 2026-01-10 08:00:07,049 | INFO     | overall cleanup function is called
[2026-01-10 09:01:12] 2026-01-10 08:00:08,058 | INFO     | --- collectZombieJob: --- 10, [27166]
[2026-01-10 09:01:12] 2026-01-10 08:00:08,058 | INFO     | zombie collector waiting for pid 27166
[2026-01-10 09:01:12] 2026-01-10 08:00:08,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:01:12] 2026-01-10 08:00:08,058 | INFO     | collected zombie processes
[2026-01-10 09:01:12] 2026-01-10 08:00:08,058 | INFO     | will attempt to kill all subprocesses of pid=27166
[2026-01-10 09:01:12] 2026-01-10 08:00:08,140 | INFO     | process IDs to be killed: [27166] (in reverse order)
[2026-01-10 09:01:12] 2026-01-10 08:00:08,916 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:01:12] 2026-01-10 08:00:08,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:01:12] 2026-01-10 08:00:08,919 | INFO     | did not find any defunct processes belonging to 27166
[2026-01-10 09:01:12] 2026-01-10 08:00:08,921 | INFO     | did not find any defunct processes belonging to 27166
[2026-01-10 09:01:12] 2026-01-10 08:00:08,921 | INFO     | ready for new job
[2026-01-10 09:01:12] 2026-01-10 08:00:08,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:01:12] 2026-01-10 08:00:08,923 | INFO     | ***************************************
[2026-01-10 09:01:12] 2026-01-10 08:00:08,923 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:01:12] 2026-01-10 08:00:08,923 | INFO     | ***************************************
[2026-01-10 09:01:12] 2026-01-10 08:00:08,923 | INFO     | 
[2026-01-10 09:01:12] 2026-01-10 08:00:08,924 | INFO     | pilot is running in a VM
[2026-01-10 09:01:12] 2026-01-10 08:00:08,924 | INFO     | architecture information:
[2026-01-10 09:01:12] 2026-01-10 08:00:08,934 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:01:12] 2026-01-10 08:00:09,255 | INFO     | cat /etc/os-release:
[2026-01-10 09:01:12] NAME="CentOS Linux"
[2026-01-10 09:01:12] VERSION="7 (Core)"
[2026-01-10 09:01:12] ID="centos"
[2026-01-10 09:01:12] ID_LIKE="rhel fedora"
[2026-01-10 09:01:12] VERSION_ID="7"
[2026-01-10 09:01:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:01:12] ANSI_COLOR="0;31"
[2026-01-10 09:01:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:01:12] HOME_URL="https://www.centos.org/"
[2026-01-10 09:01:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:01:12] 
[2026-01-10 09:01:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:01:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:01:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:01:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:01:12] 
[2026-01-10 09:01:12] 2026-01-10 08:00:09,256 | INFO     | ***************************************
[2026-01-10 09:01:12] 2026-01-10 08:00:09,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-10 09:01:12] 2026-01-10 08:00:10,037 | INFO     | sufficient remaining disk space (497785241600 B)
[2026-01-10 09:01:12] 2026-01-10 08:00:10,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:01:12] 2026-01-10 08:00:10,038 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:01:12] 2026-01-10 08:00:10,038 | INFO     | update_server=False
[2026-01-10 09:01:12] 2026-01-10 08:00:10,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:01:12] 2026-01-10 08:00:10,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:01:12] 2026-01-10 08:00:10,043 | INFO     | aborting loop
[2026-01-10 09:01:12] 2026-01-10 08:00:10,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:01:12] 2026-01-10 08:00:10,167 | INFO     | all payload control threads have been joined
[2026-01-10 09:01:12] 2026-01-10 08:00:10,351 | INFO     | all job control threads have been joined
[2026-01-10 09:01:12] 2026-01-10 08:00:10,549 | INFO     | all data control threads have been joined
[2026-01-10 09:01:12] 2026-01-10 08:00:11,044 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,049 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,113 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,173 | INFO     | [payload] control thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,357 | INFO     | [job] control thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,406 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:01:12] 2026-01-10 08:00:11,533 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,555 | INFO     | [data] control thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,770 | INFO     | [job] validate thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:11,941 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:12,061 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:12,352 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:12,529 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:12,544 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:12,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:01:12] 2026-01-10 08:00:16,719 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:21,061 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:01:12] 2026-01-10 08:00:22,067 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:01:12] 2026-01-10 08:00:39,878 | INFO     | PID=20626 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:01:12] 2026-01-10 08:00:39,879 | INFO     | .. there are 2 such processes running
[2026-01-10 09:01:12] 2026-01-10 08:00:39,879 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:01:12] 2026-01-10 08:00:39,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:01:12] 2026-01-10 08:00:39,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:01:12] 2026-01-10 08:01:00,262 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:01:12] 2026-01-10 08:01:01,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394606114624)>', '<ExcThread(monitor, started 140394310375168)>']
[2026-01-10 09:01:12] 2026-01-10 08:01:02,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:01:12] 2026-01-10 08:01:02,010 | INFO     | [monitor] control thread has ended
[2026-01-10 09:01:12] 2026-01-10 08:01:06,434 | INFO     | all workflow threads have been joined
[2026-01-10 09:01:12] 2026-01-10 08:01:06,434 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:01:12] 2026-01-10 08:01:06,434 | INFO     | traces error code: 0
[2026-01-10 09:01:12] 2026-01-10 08:01:06,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:01:12] 2026-01-10 08:01:06,831 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:01:12] 2026-01-10 08:01:06,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:01:12] 2026-01-10 08:01:07,070 [wrapper] pilotpid: 20626
[2026-01-10 09:01:12] 2026-01-10 08:01:07,189 [wrapper] Pilot exit status: 0
[2026-01-10 09:01:12] 2026-01-10 08:01:07,659 [wrapper] pandaids: 6963383909
[2026-01-10 09:01:12] 2026-01-10 08:01:08,694 [wrapper] cleanup supervisor_pilot 29619 20627
[2026-01-10 09:01:12] 2026-01-10 08:01:08,782 [wrapper] Test setup, not cleaning
[2026-01-10 09:01:12] 2026-01-10 08:01:08,893 [wrapper] apfmon messages muted
[2026-01-10 09:01:12] 2026-01-10 08:01:08,978 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:01:12] 2026-01-10 08:01:09,040 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:01:12]  *** Error codes and diagnostics ***
[2026-01-10 09:01:12]     "exeErrorCode": 0,
[2026-01-10 09:01:12]     "exeErrorDiag": "",
[2026-01-10 09:01:12]     "pilotErrorCode": 0,
[2026-01-10 09:01:12]     "pilotErrorDiag": "",
[2026-01-10 09:01:12]  *** Listing of results directory ***
[2026-01-10 09:01:12] total 427588
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 09:01:12] -rwx------. 1 boinc boinc     36322 Jan  9 08:15 runpilot2-wrapper.sh
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:16 queuedata.json
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc       100 Jan 10 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:01:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 05:45 run_atlas
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc       105 Jan 10 05:45 job.xml
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc      6391 Jan 10 05:45 init_data.xml
[2026-01-10 09:01:12] -rw-r--r--. 2 boinc boinc 252394084 Jan 10 05:45 EVNT.47929286._000086.pool.root.1
[2026-01-10 09:01:12] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:45 start_atlas.sh
[2026-01-10 09:01:12] drwxrwx--x. 2 boinc boinc        68 Jan 10 05:45 shared
[2026-01-10 09:01:12] -rw-r--r--. 2 boinc boinc    592404 Jan 10 05:45 input.tar.gz
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc         0 Jan 10 05:45 boinc_lockfile
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc      2550 Jan 10 05:45 pandaJob.out
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc    989374 Jan 10 05:49 agis_schedconf.cvmfs.json
[2026-01-10 09:01:12] drwx------. 5 boinc boinc      4096 Jan 10 05:49 pilot3
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc 177620282 Jan 10 08:56 HITS.47929288._002370.pool.root.1
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc       531 Jan 10 08:57 boinc_task_state.xml
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc      1022 Jan 10 08:58 memory_monitor_summary.json
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc   1516240 Jan 10 08:58 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc    424645 Jan 10 08:58 log.47929288._002370.job.log.tgz.1
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc        95 Jan 10 08:59 pilot_heartbeat.json
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc      7784 Jan 10 09:00 heartbeat.json
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc      4957 Jan 10 09:01 pilotlog.txt
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc   1545364 Jan 10 09:01 log.47929288._002370.job.log.1
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc       357 Jan 10 09:01 output.list
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc      8192 Jan 10 09:01 boinc_mmap_file
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc       620 Jan 10 09:01 runtime_log
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc   1986560 Jan 10 09:01 result.tar.gz
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc      8833 Jan 10 09:01 runtime_log.err
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc       656 Jan 10 09:01 He2LDmWtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmYmKDmToBqrm.diag
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc        28 Jan 10 09:01 wrapper_checkpoint.txt
[2026-01-10 09:01:12] -rw-r--r--. 1 boinc boinc     20749 Jan 10 09:01 stderr.txt
[2026-01-10 09:01:12] HITS file was successfully produced:
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc 177620282 Jan 10 08:56 shared/HITS.pool.root.1
[2026-01-10 09:01:12]  *** Contents of shared directory: ***
[2026-01-10 09:01:12] total 422476
[2026-01-10 09:01:12] -rw-r--r--. 2 boinc boinc 252394084 Jan 10 05:45 ATLAS.root_0
[2026-01-10 09:01:12] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:45 start_atlas.sh
[2026-01-10 09:01:12] -rw-r--r--. 2 boinc boinc    592404 Jan 10 05:45 input.tar.gz
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc 177620282 Jan 10 08:56 HITS.pool.root.1
[2026-01-10 09:01:12] -rw-------. 1 boinc boinc   1986560 Jan 10 09:01 result.tar.gz
09:01:14 (16860): run_atlas exited; CPU time 54359.515865
09:01:14 (16860): called boinc_finish(0)

</stderr_txt>
]]>

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