Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:20:49 (2361201): wrapper (7.7.26015): starting
03:20:49 (2361201): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 03:20:49] Arguments: --nthreads 12
[2026-01-10 03:20:49] Threads: 12
[2026-01-10 03:20:49] Checking for CVMFS
[2026-01-10 03:20:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:20:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:20:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:20:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:20:49] 2.13.3.0 40677 1288 66460 154966 2 124 2971442 4096000 5645 130560 0 6473300 99.923 262012 279 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-10 03:20:49] CVMFS is ok
[2026-01-10 03:20:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:20:49] Checking for apptainer binary...
[2026-01-10 03:20:49] apptainer is not installed, using version from CVMFS
[2026-01-10 03:20:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:20:50] epyc7v12
[2026-01-10 03:20:50] apptainer works
[2026-01-10 03:20:50] Set ATHENA_PROC_NUMBER=12
[2026-01-10 03:20:50] Set ATHENA_CORE_NUMBER=12
[2026-01-10 03:20:50] Starting ATLAS job with PandaID=6963195784
[2026-01-10 03:20:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:06:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:06:25] 2026-01-10 06:05:37,380 | INFO     | time since job start (9874s) is within the limit (349056.0s)
[2026-01-10 06:06:25] 2026-01-10 06:05:37,638 | INFO     | monitor loop #700: job 0:6963195784 is in state 'finished'
[2026-01-10 06:06:25] 2026-01-10 06:05:37,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,665 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:06:25] 2026-01-10 06:05:38,687 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2360.1108203124995
[2026-01-10 06:06:25] 2026-01-10 06:05:38,711 | INFO     | using path: /opt/boinc/instance_homes/boinc_31422/slots/2/PanDA_Pilot-6963195784/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,712 | INFO     | extracted standard info from prmon json
[2026-01-10 06:06:25] 2026-01-10 06:05:38,712 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:06:25] 2026-01-10 06:05:38,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:06:25] 2026-01-10 06:05:38,716 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:06:25] 2026-01-10 06:05:38,716 | INFO     | sum of square deviations: 1318277450.3456802
[2026-01-10 06:06:25] 2026-01-10 06:05:38,717 | INFO     | sum of deviations: -3378896515.6419563
[2026-01-10 06:06:25] 2026-01-10 06:05:38,717 | INFO     | mean x: 1768020206.4691358
[2026-01-10 06:06:25] 2026-01-10 06:05:38,717 | INFO     | mean y: 3269453.2716049384
[2026-01-10 06:06:25] 2026-01-10 06:05:38,717 | INFO     | intersect: 4534908307.942628
[2026-01-10 06:06:25] 2026-01-10 06:05:38,717 | INFO     | chi2: 5.045245308011499
[2026-01-10 06:06:25] 2026-01-10 06:05:38,718 | INFO     | sum of square deviations: 1199988228.0
[2026-01-10 06:06:25] 2026-01-10 06:05:38,719 | INFO     | sum of deviations: 50697638363.99999
[2026-01-10 06:06:25] 2026-01-10 06:05:38,719 | INFO     | mean x: 1768020054.0
[2026-01-10 06:06:25] 2026-01-10 06:05:38,719 | INFO     | mean y: 3338792.0891719745
[2026-01-10 06:06:25] 2026-01-10 06:05:38,719 | INFO     | intersect: -74692761741.65018
[2026-01-10 06:06:25] 2026-01-10 06:05:38,719 | INFO     | chi2: 2.3968943929114745
[2026-01-10 06:06:25] 2026-01-10 06:05:38,719 | INFO     | current chi2=2.3968943929114745 (change=52.492014826209285 %)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,720 | INFO     | sum of square deviations: 1088973105.9736817
[2026-01-10 06:06:25] 2026-01-10 06:05:38,720 | INFO     | sum of deviations: 64223891574.2105
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | mean x: 1768019901.5131578
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | mean y: 3357121.3947368423
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | intersect: -104268380934.3398
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | chi2: 2.109473354961012
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | current chi2=2.109473354961012 (change=11.991393479849402 %)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | right removable region: 151
[2026-01-10 06:06:25] 2026-01-10 06:05:38,721 | INFO     | sum of square deviations: 1199911857.9745193
[2026-01-10 06:06:25] 2026-01-10 06:05:38,722 | INFO     | sum of deviations: -46358585655.28662
[2026-01-10 06:06:25] 2026-01-10 06:05:38,722 | INFO     | mean x: 1768020358.987261
[2026-01-10 06:06:25] 2026-01-10 06:05:38,723 | INFO     | mean y: 3324244.3566878983
[2026-01-10 06:06:25] 2026-01-10 06:05:38,723 | INFO     | intersect: 68310777585.76876
[2026-01-10 06:06:25] 2026-01-10 06:05:38,723 | INFO     | chi2: 3.055291923212743
[2026-01-10 06:06:25] 2026-01-10 06:05:38,723 | INFO     | current chi2=3.055291923212743 (change=39.44215322174421 %)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,723 | INFO     | sum of square deviations: 1088877827.9736817
[2026-01-10 06:06:25] 2026-01-10 06:05:38,724 | INFO     | sum of deviations: -51324683681.315796
[2026-01-10 06:06:25] 2026-01-10 06:05:38,724 | INFO     | mean x: 1768020511.4868422
[2026-01-10 06:06:25] 2026-01-10 06:05:38,724 | INFO     | mean y: 3331013.8421052634
[2026-01-10 06:06:25] 2026-01-10 06:05:38,725 | INFO     | intersect: 83339671568.23312
[2026-01-10 06:06:25] 2026-01-10 06:05:38,725 | INFO     | chi2: 3.017206546812448
[2026-01-10 06:06:25] 2026-01-10 06:05:38,725 | INFO     | current chi2=3.017206546812448 (change=1.2465380512722664 %)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,725 | INFO     | left removable region: 20
[2026-01-10 06:06:25] 2026-01-10 06:05:38,725 | INFO     | sum of square deviations: 697088972.8091601
[2026-01-10 06:06:25] 2026-01-10 06:05:38,726 | INFO     | sum of deviations: 9322570957.839693
[2026-01-10 06:06:25] 2026-01-10 06:05:38,726 | INFO     | mean x: 1768020481.038168
[2026-01-10 06:06:25] 2026-01-10 06:05:38,726 | INFO     | mean y: 3438380.8320610686
[2026-01-10 06:06:25] 2026-01-10 06:05:38,726 | INFO     | intersect: -23641314344.161266
[2026-01-10 06:06:25] 2026-01-10 06:05:38,726 | INFO     | chi2: 0.01809562466004564
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | current memory leak: 13.37 B/s (using 131 data points, chi2=0.02)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | could have reported an average CPU frequency of 2387 MHz (9 samples)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | ..............................
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | . Timing measurements:
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | . get job = 0 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | . initial setup = 1 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,727 | INFO     | . payload setup = 8 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,728 | INFO     | . stage-in = 0 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,728 | INFO     | . payload execution = 9835 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,728 | INFO     | . stage-out = 1 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,728 | INFO     | . log creation = 0 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,728 | INFO     | ..............................
[2026-01-10 06:06:25] 2026-01-10 06:05:38,828 | INFO     | 
[2026-01-10 06:06:25] 2026-01-10 06:05:38,828 | INFO     | job summary report
[2026-01-10 06:06:25] 2026-01-10 06:05:38,828 | INFO     | --------------------------------------------------
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | PanDA job id: 6963195784
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | task id: 47962010
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | errors: (none)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | pilot state: finished 
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | transexitcode: 0
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | exeerrorcode: 0
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | exeerrordiag: 
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | exitcode: 0
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | exitmsg: OK
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | cpuconsumptiontime: 109956 s
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | nevents: 450
[2026-01-10 06:06:25] 2026-01-10 06:05:38,829 | INFO     | neventsw: 0
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | pid: 2387944
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | pgrp: 2387944
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | corecount: 12
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | event service: False
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | sizes: {0: 2284472, 1: 2284671, 7: 2284933, 11: 2284961, 9848: 2314310, 9850: 2323350, 9852: 2323534, 9858: 2323844}
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | --------------------------------------------------
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | 
[2026-01-10 06:06:25] 2026-01-10 06:05:38,830 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/2
[2026-01-10 06:06:25] 2026-01-10 06:05:38,859 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,859 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,859 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,859 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | job 6963195784 has completed (purged errors)
[2026-01-10 06:06:25] 2026-01-10 06:05:38,861 | INFO     | overall cleanup function is called
[2026-01-10 06:06:25] 2026-01-10 06:05:39,885 | INFO     | --- collectZombieJob: --- 10, [2387944]
[2026-01-10 06:06:25] 2026-01-10 06:05:39,885 | INFO     | zombie collector waiting for pid 2387944
[2026-01-10 06:06:25] 2026-01-10 06:05:39,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:06:25] 2026-01-10 06:05:39,885 | INFO     | collected zombie processes
[2026-01-10 06:06:25] 2026-01-10 06:05:39,886 | INFO     | will attempt to kill all subprocesses of pid=2387944
[2026-01-10 06:06:25] 2026-01-10 06:05:40,435 | INFO     | process IDs to be killed: [2387944] (in reverse order)
[2026-01-10 06:06:25] 2026-01-10 06:05:40,651 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:06:25] 2026-01-10 06:05:40,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:06:25] 2026-01-10 06:05:40,667 | INFO     | did not find any defunct processes belonging to 2387944
[2026-01-10 06:06:25] 2026-01-10 06:05:40,680 | INFO     | did not find any defunct processes belonging to 2387944
[2026-01-10 06:06:25] 2026-01-10 06:05:40,680 | INFO     | ready for new job
[2026-01-10 06:06:25] 2026-01-10 06:05:40,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:06:25] 2026-01-10 06:05:40,683 | INFO     | ***************************************
[2026-01-10 06:06:25] 2026-01-10 06:05:40,683 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:06:25] 2026-01-10 06:05:40,683 | INFO     | ***************************************
[2026-01-10 06:06:25] 2026-01-10 06:05:40,683 | INFO     | 
[2026-01-10 06:06:25] 2026-01-10 06:05:40,692 | INFO     | architecture information:
[2026-01-10 06:06:25] 2026-01-10 06:05:40,692 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:06:25] 2026-01-10 06:05:40,713 | INFO     | cat /etc/os-release:
[2026-01-10 06:06:25] NAME="CentOS Linux"
[2026-01-10 06:06:25] VERSION="7 (Core)"
[2026-01-10 06:06:25] ID="centos"
[2026-01-10 06:06:25] ID_LIKE="rhel fedora"
[2026-01-10 06:06:25] VERSION_ID="7"
[2026-01-10 06:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:06:25] ANSI_COLOR="0;31"
[2026-01-10 06:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:06:25] HOME_URL="https://www.centos.org/"
[2026-01-10 06:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:06:25] 
[2026-01-10 06:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:06:25] 
[2026-01-10 06:06:25] 2026-01-10 06:05:40,713 | INFO     | ***************************************
[2026-01-10 06:06:25] 2026-01-10 06:05:41,216 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/2
[2026-01-10 06:06:25] 2026-01-10 06:05:41,238 | INFO     | sufficient remaining disk space (359394181120 B)
[2026-01-10 06:06:25] 2026-01-10 06:05:41,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:06:25] 2026-01-10 06:05:41,238 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:06:25] 2026-01-10 06:05:41,238 | INFO     | update_server=False
[2026-01-10 06:06:25] 2026-01-10 06:05:41,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:06:25] 2026-01-10 06:05:41,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:06:25] 2026-01-10 06:05:41,239 | INFO     | aborting loop
[2026-01-10 06:06:25] 2026-01-10 06:05:41,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:06:25] 2026-01-10 06:05:41,374 | INFO     | all data control threads have been joined
[2026-01-10 06:06:25] 2026-01-10 06:05:42,081 | INFO     | all job control threads have been joined
[2026-01-10 06:06:25] 2026-01-10 06:05:42,127 | INFO     | all payload control threads have been joined
[2026-01-10 06:06:25] 2026-01-10 06:05:42,243 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,244 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,380 | INFO     | [data] control thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,419 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,548 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,665 | INFO     | [job] validate thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,704 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:42,903 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,074 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,086 | INFO     | [job] control thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,128 | INFO     | [payload] control thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,167 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,242 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:06:25] 2026-01-10 06:05:43,538 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:43,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:06:25] 2026-01-10 06:05:44,843 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:05:47,330 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:06:25] 2026-01-10 06:06:01,504 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-01-10 06:06:25] 2026-01-10 06:06:11,132 | INFO     | PID=2368592 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 06:06:25] 2026-01-10 06:06:11,132 | INFO     | .. there are 11 such processes running
[2026-01-10 06:06:25] 2026-01-10 06:06:11,132 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:06:25] 2026-01-10 06:06:11,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:06:25] 2026-01-10 06:06:11,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:06:25] 2026-01-10 06:06:18,624 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:06:25] 2026-01-10 06:06:20,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126946433484608)>', '<ExcThread(monitor, started 126945811494656)>']
[2026-01-10 06:06:25] 2026-01-10 06:06:20,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:06:25] 2026-01-10 06:06:20,177 | INFO     | [monitor] control thread has ended
[2026-01-10 06:06:25] 2026-01-10 06:06:25,160 | INFO     | all workflow threads have been joined
[2026-01-10 06:06:25] 2026-01-10 06:06:25,160 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:06:25] 2026-01-10 06:06:25,161 | INFO     | traces error code: 0
[2026-01-10 06:06:25] 2026-01-10 06:06:25,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:06:25] 2026-01-10 06:06:25,289 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:06:25] 2026-01-10 06:06:25,294 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:06:25] 2026-01-10 06:06:25,298 [wrapper] pilotpid: 2368592
[2026-01-10 06:06:25] 2026-01-10 06:06:25,303 [wrapper] Pilot exit status: 0
[2026-01-10 06:06:25] 2026-01-10 06:06:25,317 [wrapper] pandaids: 6963195784
[2026-01-10 06:06:25] 2026-01-10 06:06:25,434 [wrapper] cleanup supervisor_pilot 2847997 2368593
[2026-01-10 06:06:25] 2026-01-10 06:06:25,439 [wrapper] Test setup, not cleaning
[2026-01-10 06:06:25] 2026-01-10 06:06:25,443 [wrapper] apfmon messages muted
[2026-01-10 06:06:25] 2026-01-10 06:06:25,447 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:06:25] 2026-01-10 06:06:25,451 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:06:25]  *** Error codes and diagnostics ***
[2026-01-10 06:06:25]     "exeErrorCode": 0,
[2026-01-10 06:06:25]     "exeErrorDiag": "",
[2026-01-10 06:06:25]     "pilotErrorCode": 0,
[2026-01-10 06:06:25]     "pilotErrorDiag": "",
[2026-01-10 06:06:25]  *** Listing of results directory ***
[2026-01-10 06:06:25] total 782052
[2026-01-10 06:06:25] -rwx------ 1 boinc boinc     36322 Jan  9 07:16 runpilot2-wrapper.sh
[2026-01-10 06:06:25] -rw-r--r-- 1 boinc boinc      5112 Jan  9 07:20 queuedata.json
[2026-01-10 06:06:25] -rw-r--r-- 1 boinc boinc    579449 Jan  9 07:20 pilot3.tar.gz
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc       100 Jan 10 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:06:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 03:20 run_atlas
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc       105 Jan 10 03:20 job.xml
[2026-01-10 06:06:25] -rw-r--r-- 2 boinc boinc 392145699 Jan 10 03:20 EVNT.47962006._000058.pool.root.1
[2026-01-10 06:06:25] -rw-r--r-- 2 boinc boinc     15847 Jan 10 03:20 start_atlas.sh
[2026-01-10 06:06:25] drwxrwx--x 2 boinc boinc      4096 Jan 10 03:20 shared
[2026-01-10 06:06:25] -rw-r--r-- 2 boinc boinc    592607 Jan 10 03:20 input.tar.gz
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc      6556 Jan 10 03:20 init_data.xml
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc         0 Jan 10 03:20 boinc_setup_complete
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc         0 Jan 10 03:20 boinc_lockfile
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc      2891 Jan 10 03:20 pandaJob.out
[2026-01-10 06:06:25] -rw------- 1 boinc boinc    989374 Jan 10 03:21 agis_schedconf.cvmfs.json
[2026-01-10 06:06:25] -rw------- 1 boinc boinc   1516240 Jan 10 03:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:06:25] drwx------ 5 boinc boinc      4096 Jan 10 03:21 pilot3
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc       531 Jan 10 05:56 boinc_task_state.xml
[2026-01-10 06:06:25] -rw------- 1 boinc boinc 398302153 Jan 10 06:05 HITS.47962010._000615.pool.root.1
[2026-01-10 06:06:25] -rw------- 1 boinc boinc      1029 Jan 10 06:05 memory_monitor_summary.json
[2026-01-10 06:06:25] -rw------- 1 boinc boinc   1806227 Jan 10 06:05 log.47962010._000615.job.log.tgz.1
[2026-01-10 06:06:25] -rw------- 1 boinc boinc        95 Jan 10 06:05 pilot_heartbeat.json
[2026-01-10 06:06:25] -rw------- 1 boinc boinc      8532 Jan 10 06:05 heartbeat.json
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc      8192 Jan 10 06:06 boinc_mmap_file
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc        28 Jan 10 06:06 wrapper_checkpoint.txt
[2026-01-10 06:06:25] -rw------- 1 boinc boinc      4848 Jan 10 06:06 pilotlog.txt
[2026-01-10 06:06:25] -rw------- 1 boinc boinc   1424985 Jan 10 06:06 log.47962010._000615.job.log.1
[2026-01-10 06:06:25] -rw------- 1 boinc boinc       353 Jan 10 06:06 output.list
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc       620 Jan 10 06:06 runtime_log
[2026-01-10 06:06:25] -rw------- 1 boinc boinc   3246080 Jan 10 06:06 result.tar.gz
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc      9167 Jan 10 06:06 runtime_log.err
[2026-01-10 06:06:25] -rw------- 1 boinc boinc       658 Jan 10 06:06 ldwMDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpNhKDmGHTyzm.diag
[2026-01-10 06:06:25] -rw-rw-r-- 1 boinc boinc     20992 Jan 10 06:06 stderr.txt
[2026-01-10 06:06:25] HITS file was successfully produced:
[2026-01-10 06:06:25] -rw------- 1 boinc boinc 398302153 Jan 10 06:05 shared/HITS.pool.root.1
[2026-01-10 06:06:25]  *** Contents of shared directory: ***
[2026-01-10 06:06:25] total 775700
[2026-01-10 06:06:25] -rw-r--r-- 2 boinc boinc 392145699 Jan 10 03:20 ATLAS.root_0
[2026-01-10 06:06:25] -rw-r--r-- 2 boinc boinc     15847 Jan 10 03:20 start_atlas.sh
[2026-01-10 06:06:25] -rw-r--r-- 2 boinc boinc    592607 Jan 10 03:20 input.tar.gz
[2026-01-10 06:06:25] -rw------- 1 boinc boinc 398302153 Jan 10 06:05 HITS.pool.root.1
[2026-01-10 06:06:25] -rw------- 1 boinc boinc   3246080 Jan 10 06:06 result.tar.gz
06:06:27 (2361201): run_atlas exited; CPU time 110068.125263
06:06:27 (2361201): called boinc_finish(0)

</stderr_txt>
]]>

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