Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:27 (3398930): wrapper (7.7.26015): starting
17:20:27 (3398930): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:20:27] Arguments: --nthreads 8
[2026-01-09 17:20:27] Threads: 8
[2026-01-09 17:20:27] Checking for CVMFS
[2026-01-09 17:20:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:20:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:20:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:20:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:20:29] 2.13.3.0 9597 23250 134636 154959 2 218 22147262 40960001 26284 16776704 0 110723199 99.656 97579916 46929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:20:29] CVMFS is ok
[2026-01-09 17:20:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:20:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:20:29] Further information can be found at the LHC@home message board.
[2026-01-09 17:20:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:20:29] Checking for apptainer binary...
[2026-01-09 17:20:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:20:29] Running /usr/bin/apptainer --version
[2026-01-09 17:20:29] apptainer version 1.4.5-2.el9
[2026-01-09 17:20:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:20:29] c-208-38.aglt2.org
[2026-01-09 17:20:29] apptainer works
[2026-01-09 17:20:29] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:20:29] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:20:29] Starting ATLAS job with PandaID=6963957029
[2026-01-09 17:20:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:01:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:01:52] 2026-01-10 01:01:09,335 | INFO     | time since job start (9581s) is within the limit (349056.0s)
[2026-01-09 20:01:52] 2026-01-10 01:01:11,674 | INFO     | monitor loop #611: job 0:6963957029 is in state 'finished'
[2026-01-09 20:01:52] 2026-01-10 01:01:11,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:52] 2026-01-10 01:01:12,980 | INFO     | PID=3404695 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:01:52] 2026-01-10 01:01:12,980 | INFO     | .. there are 26 such processes running
[2026-01-09 20:01:52] 2026-01-10 01:01:13,983 | INFO     | time since job start (9585s) is within the limit (349056.0s)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,221 | INFO     | monitor loop #612: job 0:6963957029 is in state 'finished'
[2026-01-09 20:01:52] 2026-01-10 01:01:14,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,647 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 20:01:52] 2026-01-10 01:01:14,652 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.458304687499
[2026-01-09 20:01:52] 2026-01-10 01:01:14,665 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963957029/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,667 | INFO     | extracted standard info from prmon json
[2026-01-09 20:01:52] 2026-01-10 01:01:14,667 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:01:52] 2026-01-10 01:01:14,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:01:52] 2026-01-10 01:01:14,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:01:52] 2026-01-10 01:01:14,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:01:52] 2026-01-10 01:01:14,669 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:01:52] 2026-01-10 01:01:14,669 | INFO     | sum of square deviations: 1154625730.6709664
[2026-01-09 20:01:52] 2026-01-10 01:01:14,670 | INFO     | sum of deviations: -16920818972.14193
[2026-01-09 20:01:52] 2026-01-10 01:01:14,670 | INFO     | mean x: 1768002113.1225805
[2026-01-09 20:01:52] 2026-01-10 01:01:14,670 | INFO     | mean y: 2560689.95483871
[2026-01-09 20:01:52] 2026-01-10 01:01:14,670 | INFO     | intersect: 25912293085.340675
[2026-01-09 20:01:52] 2026-01-10 01:01:14,670 | INFO     | chi2: 4.0363830473119044
[2026-01-09 20:01:52] 2026-01-10 01:01:14,670 | INFO     | sum of square deviations: 1046443297.3399996
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | sum of deviations: -5153210186.98
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | mean x: 1768001960.62
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | mean y: 2576892.1933333334
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | intersect: 8709102833.185032
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | chi2: 3.2740504712504355
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | current chi2=3.2740504712504355 (change=18.88652704973471 %)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,687 | INFO     | right removable region: 149
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | sum of square deviations: 1046441163.0933363
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | sum of deviations: -57754841799.293335
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | mean x: 1768002265.6266668
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | mean y: 2617852.6733333333
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | intersect: 97581626356.32933
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | chi2: 1.0826150167602615
[2026-01-09 20:01:52] 2026-01-10 01:01:14,688 | INFO     | current chi2=1.0826150167602615 (change=73.17858577665848 %)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | sum of square deviations: 945233470.5103433
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | sum of deviations: -55781025995.63446
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | mean x: 1768002418.1310344
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | mean y: 2614749.296551724
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | intersect: 104337672619.03653
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | chi2: 1.0452098868611448
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | current chi2=1.0452098868611448 (change=3.4550721466114527 %)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | left removable region: 20
[2026-01-09 20:01:52] 2026-01-10 01:01:14,689 | INFO     | sum of square deviations: 665566278.0155056
[2026-01-09 20:01:52] 2026-01-10 01:01:14,690 | INFO     | sum of deviations: -31050095719.457367
[2026-01-09 20:01:52] 2026-01-10 01:01:14,690 | INFO     | mean x: 1768002540.124031
[2026-01-09 20:01:52] 2026-01-10 01:01:14,690 | INFO     | mean y: 2612681.3410852714
[2026-01-09 20:01:52] 2026-01-10 01:01:14,690 | INFO     | intersect: 82483726758.78238
[2026-01-09 20:01:52] 2026-01-10 01:01:14,690 | INFO     | chi2: 0.1936443328079424
[2026-01-09 20:01:52] 2026-01-10 01:01:14,690 | INFO     | current memory leak: -46.65 B/s (using 129 data points, chi2=0.19)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | could have reported an average CPU frequency of 3798 MHz (9 samples)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | ..............................
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . Timing measurements:
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . get job = 0 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . initial setup = 4 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . payload setup = 39 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . stage-in = 0 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . payload execution = 9441 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . stage-out = 2 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | . log creation = 0 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,691 | INFO     | ..............................
[2026-01-09 20:01:52] 2026-01-10 01:01:14,751 | INFO     | 
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | job summary report
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | --------------------------------------------------
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | PanDA job id: 6963957029
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | task id: 47898826
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | errors: (none)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | pilot state: finished 
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | transexitcode: 0
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | exeerrorcode: 0
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | exeerrordiag: 
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | exitcode: 0
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | exitmsg: OK
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | cpuconsumptiontime: 32704 s
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | nevents: 400
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | neventsw: 0
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | pid: 3414606
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | pgrp: 3414606
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | corecount: 8
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | event service: False
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | sizes: {0: 2283921, 1: 2283921, 12: 2283949, 23: 2283977, 29: 2284267, 33: 2284295, 9485: 2312841, 9488: 2321895, 9524: 2322097}
[2026-01-09 20:01:52] 2026-01-10 01:01:14,752 | INFO     | --------------------------------------------------
[2026-01-09 20:01:52] 2026-01-10 01:01:14,753 | INFO     | 
[2026-01-09 20:01:52] 2026-01-10 01:01:14,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | job 6963957029 has completed (purged errors)
[2026-01-09 20:01:52] 2026-01-10 01:01:14,838 | INFO     | overall cleanup function is called
[2026-01-09 20:01:52] 2026-01-10 01:01:15,846 | INFO     | --- collectZombieJob: --- 10, [3414606]
[2026-01-09 20:01:52] 2026-01-10 01:01:15,846 | INFO     | zombie collector waiting for pid 3414606
[2026-01-09 20:01:52] 2026-01-10 01:01:15,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:01:52] 2026-01-10 01:01:15,846 | INFO     | collected zombie processes
[2026-01-09 20:01:52] 2026-01-10 01:01:15,846 | INFO     | will attempt to kill all subprocesses of pid=3414606
[2026-01-09 20:01:52] 2026-01-10 01:01:17,731 | INFO     | process IDs to be killed: [3414606] (in reverse order)
[2026-01-09 20:01:52] 2026-01-10 01:01:18,573 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:01:52] 2026-01-10 01:01:18,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:01:52] 2026-01-10 01:01:18,685 | INFO     | did not find any defunct processes belonging to 3414606
[2026-01-09 20:01:52] 2026-01-10 01:01:18,799 | INFO     | did not find any defunct processes belonging to 3414606
[2026-01-09 20:01:52] 2026-01-10 01:01:18,800 | INFO     | ready for new job
[2026-01-09 20:01:52] 2026-01-10 01:01:18,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:01:52] 2026-01-10 01:01:18,801 | INFO     | ***************************************
[2026-01-09 20:01:52] 2026-01-10 01:01:18,801 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:01:52] 2026-01-10 01:01:18,801 | INFO     | ***************************************
[2026-01-09 20:01:52] 2026-01-10 01:01:18,801 | INFO     | 
[2026-01-09 20:01:52] 2026-01-10 01:01:18,831 | INFO     | architecture information:
[2026-01-09 20:01:52] 2026-01-10 01:01:18,831 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:01:52] 2026-01-10 01:01:18,875 | INFO     | cat /etc/os-release:
[2026-01-09 20:01:52] NAME="CentOS Linux"
[2026-01-09 20:01:52] VERSION="7 (Core)"
[2026-01-09 20:01:52] ID="centos"
[2026-01-09 20:01:52] ID_LIKE="rhel fedora"
[2026-01-09 20:01:52] VERSION_ID="7"
[2026-01-09 20:01:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:01:52] ANSI_COLOR="0;31"
[2026-01-09 20:01:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:01:52] HOME_URL="https://www.centos.org/"
[2026-01-09 20:01:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:01:52] 
[2026-01-09 20:01:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:01:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:01:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:01:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:01:52] 
[2026-01-09 20:01:52] 2026-01-10 01:01:18,875 | INFO     | ***************************************
[2026-01-09 20:01:52] 2026-01-10 01:01:19,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 20:01:52] 2026-01-10 01:01:19,532 | INFO     | sufficient remaining disk space (168555446272 B)
[2026-01-09 20:01:52] 2026-01-10 01:01:19,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:01:52] 2026-01-10 01:01:19,532 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:01:52] 2026-01-10 01:01:19,532 | INFO     | update_server=False
[2026-01-09 20:01:52] 2026-01-10 01:01:19,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:01:52] 2026-01-10 01:01:19,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:01:52] 2026-01-10 01:01:19,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:01:52] 2026-01-10 01:01:20,063 | INFO     | all data control threads have been joined
[2026-01-09 20:01:52] 2026-01-10 01:01:20,080 | INFO     | all payload control threads have been joined
[2026-01-09 20:01:52] 2026-01-10 01:01:20,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:01:52] 2026-01-10 01:01:20,276 | INFO     | aborting loop
[2026-01-09 20:01:52] 2026-01-10 01:01:20,388 | INFO     | all job control threads have been joined
[2026-01-09 20:01:52] 2026-01-10 01:01:20,539 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:20,541 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:20,640 | INFO     | [job] validate thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:20,640 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:20,643 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:20,796 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:20,867 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,084 | INFO     | [data] control thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,087 | INFO     | [payload] control thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,277 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,281 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:01:52] 2026-01-10 01:01:21,395 | INFO     | [job] control thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,770 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:21,845 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:25,330 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:29,841 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:01:52] 2026-01-10 01:01:30,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:01:52] 2026-01-10 01:01:43,940 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:01:52] 2026-01-10 01:01:44,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655156819776)>', '<ExcThread(monitor, started 139654804264704)>']
[2026-01-09 20:01:52] 2026-01-10 01:01:49,668 | INFO     | PID=3404695 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:01:52] 2026-01-10 01:01:49,669 | INFO     | .. there are 26 such processes running
[2026-01-09 20:01:52] 2026-01-10 01:01:49,669 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:01:52] 2026-01-10 01:01:49,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:01:52] 2026-01-10 01:01:49,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:01:52] 2026-01-10 01:01:49,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:01:52] 2026-01-10 01:01:49,673 | INFO     | [monitor] control thread has ended
[2026-01-09 20:01:52] 2026-01-10 01:01:49,976 | INFO     | all workflow threads have been joined
[2026-01-09 20:01:52] 2026-01-10 01:01:49,976 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:01:52] 2026-01-10 01:01:49,976 | INFO     | traces error code: 0
[2026-01-09 20:01:52] 2026-01-10 01:01:49,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:01:52] 2026-01-10 01:01:50,781 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:01:52] 2026-01-10 01:01:50,795 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:01:52] 2026-01-10 01:01:50,813 [wrapper] pilotpid: 3404695
[2026-01-09 20:01:52] 2026-01-10 01:01:50,845 [wrapper] Pilot exit status: 0
[2026-01-09 20:01:52] 2026-01-10 01:01:50,953 [wrapper] pandaids: 6963957029
[2026-01-09 20:01:52] 2026-01-10 01:01:51,724 [wrapper] cleanup supervisor_pilot 4177298 3404696
[2026-01-09 20:01:52] 2026-01-10 01:01:51,747 [wrapper] Test setup, not cleaning
[2026-01-09 20:01:52] 2026-01-10 01:01:51,793 [wrapper] apfmon messages muted
[2026-01-09 20:01:52] 2026-01-10 01:01:51,824 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:01:52] 2026-01-10 01:01:51,845 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:01:52]  *** Error codes and diagnostics ***
[2026-01-09 20:01:52]     "exeErrorCode": 0,
[2026-01-09 20:01:52]     "exeErrorDiag": "",
[2026-01-09 20:01:52]     "pilotErrorCode": 0,
[2026-01-09 20:01:52]     "pilotErrorDiag": "",
[2026-01-09 20:01:52]  *** Listing of results directory ***
[2026-01-09 20:01:52] total 441420
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-09 20:01:52] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:01:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:20 run_atlas
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:20 job.xml
[2026-01-09 20:01:52] -rw-r--r--. 2 boincer umatlas 225149007 Jan  9 17:20 EVNT.47898824._001172.pool.root.1
[2026-01-09 20:01:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:20 start_atlas.sh
[2026-01-09 20:01:52] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:20 shared
[2026-01-09 20:01:52] -rw-r--r--. 2 boincer umatlas    592406 Jan  9 17:20 input.tar.gz
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:20 boinc_lockfile
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 17:20 pandaJob.out
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas        57 Jan  9 17:20 setup.sh.local
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas    989375 Jan  9 17:21 agis_schedconf.cvmfs.json
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas   1516240 Jan  9 17:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:01:52] drwx------. 5 boincer umatlas      4096 Jan  9 17:21 pilot3
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas      7184 Jan  9 19:55 init_data.xml
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas 219707844 Jan  9 19:59 HITS.47898826._039881.pool.root.1
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas       530 Jan  9 19:59 boinc_task_state.xml
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas      1047 Jan  9 20:00 memory_monitor_summary.json
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas    381340 Jan  9 20:00 log.47898826._039881.job.log.tgz.1
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas      7804 Jan  9 20:01 heartbeat.json
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas        95 Jan  9 20:01 pilot_heartbeat.json
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas      4897 Jan  9 20:01 pilotlog.txt
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:01 boinc_mmap_file
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas        27 Jan  9 20:01 wrapper_checkpoint.txt
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas   1237131 Jan  9 20:01 log.47898826._039881.job.log.1
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas       357 Jan  9 20:01 output.list
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:01 runtime_log
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas   1638400 Jan  9 20:01 result.tar.gz
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas       657 Jan  9 20:01 ToFMDm6sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLVmKDmQvp6nn.diag
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 20:01 runtime_log.err
[2026-01-09 20:01:52] -rw-r--r--. 1 boincer umatlas     21202 Jan  9 20:01 stderr.txt
[2026-01-09 20:01:52] HITS file was successfully produced:
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas 219707844 Jan  9 19:59 shared/HITS.pool.root.1
[2026-01-09 20:01:52]  *** Contents of shared directory: ***
[2026-01-09 20:01:52] total 436636
[2026-01-09 20:01:52] -rw-r--r--. 2 boincer umatlas 225149007 Jan  9 17:20 ATLAS.root_0
[2026-01-09 20:01:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:20 start_atlas.sh
[2026-01-09 20:01:52] -rw-r--r--. 2 boincer umatlas    592406 Jan  9 17:20 input.tar.gz
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas 219707844 Jan  9 19:59 HITS.pool.root.1
[2026-01-09 20:01:52] -rw-------. 1 boincer umatlas   1638400 Jan  9 20:01 result.tar.gz
20:01:53 (3398930): run_atlas exited; CPU time 33005.643375
20:01:53 (3398930): called boinc_finish(0)

</stderr_txt>
]]>

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