Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:47:44 (1684326): wrapper (7.7.26015): starting
16:47:44 (1684326): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:47:44] Arguments: --nthreads 8
[2026-01-09 16:47:44] Threads: 8
[2026-01-09 16:47:44] Checking for CVMFS
[2026-01-09 16:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:47:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:47:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:47:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:47:46] 2.13.3.0 12846 93923 143672 154957 2 65 25238195 32935937 15968 16776704 0 424310364 99.470 608367981 38378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:47:46] CVMFS is ok
[2026-01-09 16:47:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:47:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:47:46] Further information can be found at the LHC@home message board.
[2026-01-09 16:47:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:47:46] Checking for apptainer binary...
[2026-01-09 16:47:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:47:46] Running /usr/bin/apptainer --version
[2026-01-09 16:47:46] apptainer version 1.4.5-2.el9
[2026-01-09 16:47:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:47:47] c7-16-9.aglt2.org
[2026-01-09 16:47:47] apptainer works
[2026-01-09 16:47:47] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:47:47] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:47:48] Starting ATLAS job with PandaID=6964556532
[2026-01-09 16:47:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:36:05]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:36:05] 2026-01-10 03:35:25,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:36:05] 2026-01-10 03:35:27,053 | INFO     | time since job start (20782s) is within the limit (349056.0s)
[2026-01-09 22:36:05] 2026-01-10 03:35:27,669 | INFO     | monitor loop #1339: job 0:6964556532 is in state 'finished'
[2026-01-09 22:36:05] 2026-01-10 03:35:27,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:36:05] 2026-01-10 03:35:28,620 | INFO     | PID=1688824 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:36:05] 2026-01-10 03:35:28,620 | INFO     | .. there are 15 such processes running
[2026-01-09 22:36:05] 2026-01-10 03:35:29,622 | INFO     | time since job start (20784s) is within the limit (349056.0s)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,747 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:36:05] 2026-01-10 03:35:29,752 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3055.1580624999992
[2026-01-09 22:36:05] 2026-01-10 03:35:29,766 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6964556532/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,766 | INFO     | extracted standard info from prmon json
[2026-01-09 22:36:05] 2026-01-10 03:35:29,767 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:36:05] 2026-01-10 03:35:29,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:36:05] 2026-01-10 03:35:29,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:36:05] 2026-01-10 03:35:29,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:36:05] 2026-01-10 03:35:29,771 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:36:05] 2026-01-10 03:35:29,772 | INFO     | sum of square deviations: 11973567362.473473
[2026-01-09 22:36:05] 2026-01-10 03:35:29,774 | INFO     | sum of deviations: 58816805234.73959
[2026-01-09 22:36:05] 2026-01-10 03:35:29,774 | INFO     | mean x: 1768005780.5088758
[2026-01-09 22:36:05] 2026-01-10 03:35:29,774 | INFO     | mean y: 2514313.920118343
[2026-01-09 22:36:05] 2026-01-10 03:35:29,774 | INFO     | intersect: -8682320246.91394
[2026-01-09 22:36:05] 2026-01-10 03:35:29,775 | INFO     | chi2: 2.8360652726552007
[2026-01-09 22:36:05] 2026-01-10 03:35:29,775 | INFO     | sum of square deviations: 11450014274.973005
[2026-01-09 22:36:05] 2026-01-10 03:35:29,777 | INFO     | sum of deviations: 57491282218.61261
[2026-01-09 22:36:05] 2026-01-10 03:35:29,777 | INFO     | mean x: 1768005628.0090091
[2026-01-09 22:36:05] 2026-01-10 03:35:29,777 | INFO     | mean y: 2513927.795795796
[2026-01-09 22:36:05] 2026-01-10 03:35:29,777 | INFO     | intersect: -8874759766.62508
[2026-01-09 22:36:05] 2026-01-10 03:35:29,778 | INFO     | chi2: 2.8371901386666654
[2026-01-09 22:36:05] 2026-01-10 03:35:29,778 | INFO     | current chi2=2.8371901386666654 (change=-0.03966290981771145 %)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,778 | INFO     | right removable region: 332
[2026-01-09 22:36:05] 2026-01-10 03:35:29,778 | INFO     | sum of square deviations: 11450012444.973005
[2026-01-09 22:36:05] 2026-01-10 03:35:29,780 | INFO     | sum of deviations: -24017477050.963955
[2026-01-09 22:36:05] 2026-01-10 03:35:29,781 | INFO     | mean x: 1768005933.0090091
[2026-01-09 22:36:05] 2026-01-10 03:35:29,781 | INFO     | mean y: 2538355.321321321
[2026-01-09 22:36:05] 2026-01-10 03:35:29,781 | INFO     | intersect: 3711096937.7755175
[2026-01-09 22:36:05] 2026-01-10 03:35:29,781 | INFO     | chi2: 0.28826400331780105
[2026-01-09 22:36:05] 2026-01-10 03:35:29,781 | INFO     | current chi2=0.28826400331780105 (change=89.83577683852387 %)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,781 | INFO     | sum of square deviations: 10941946189.972507
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | sum of deviations: -30863700680.323174
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | mean x: 1768006085.5091465
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | mean y: 2540393.774390244
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | intersect: 4989515258.826368
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | chi2: 0.25371825544443577
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | current chi2=0.25371825544443577 (change=11.984065813198256 %)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,784 | INFO     | left removable region: 20
[2026-01-09 22:36:05] 2026-01-10 03:35:29,785 | INFO     | sum of square deviations: 9417531483.98717
[2026-01-09 22:36:05] 2026-01-10 03:35:29,787 | INFO     | sum of deviations: -1893254041.256394
[2026-01-09 22:36:05] 2026-01-10 03:35:29,787 | INFO     | mean x: 1768006207.5064104
[2026-01-09 22:36:05] 2026-01-10 03:35:29,787 | INFO     | mean y: 2530942.128205128
[2026-01-09 22:36:05] 2026-01-10 03:35:29,787 | INFO     | intersect: 357962182.5779304
[2026-01-09 22:36:05] 2026-01-10 03:35:29,787 | INFO     | chi2: 0.13269104853585637
[2026-01-09 22:36:05] 2026-01-10 03:35:29,787 | INFO     | current memory leak: -0.20 B/s (using 312 data points, chi2=0.13)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | could have reported an average CPU frequency of 3175 MHz (15 samples)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | ..............................
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . Timing measurements:
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . get job = 0 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . initial setup = 9 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . payload setup = 55 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . stage-in = 0 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . payload execution = 20635 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . stage-out = 3 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | . log creation = 0 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,788 | INFO     | ..............................
[2026-01-09 22:36:05] 2026-01-10 03:35:29,861 | INFO     | 
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | job summary report
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | --------------------------------------------------
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | PanDA job id: 6964556532
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | task id: 47898826
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | errors: (none)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | pilot state: finished 
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | transexitcode: 0
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | exeerrorcode: 0
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | exeerrordiag: 
[2026-01-09 22:36:05] 2026-01-10 03:35:29,866 | INFO     | exitcode: 0
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | exitmsg: OK
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | cpuconsumptiontime: 47089 s
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | nevents: 400
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | neventsw: 0
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | pid: 1699889
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | pgrp: 1699889
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | corecount: 8
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | event service: False
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | sizes: {0: 2283868, 1: 2283896, 12: 2283896, 23: 2283924, 34: 2283952, 36: 2284242, 45: 2284398, 20694: 2318118, 20699: 2327172, 20709: 2327310}
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | --------------------------------------------------
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | 
[2026-01-09 22:36:05] 2026-01-10 03:35:29,867 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 22:36:05] 2026-01-10 03:35:29,902 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:36:05] 2026-01-10 03:35:29,904 | INFO     | job 6964556532 has completed (purged errors)
[2026-01-09 22:36:05] 2026-01-10 03:35:29,904 | INFO     | overall cleanup function is called
[2026-01-09 22:36:05] 2026-01-10 03:35:30,912 | INFO     | --- collectZombieJob: --- 10, [1699889]
[2026-01-09 22:36:05] 2026-01-10 03:35:30,913 | INFO     | zombie collector waiting for pid 1699889
[2026-01-09 22:36:05] 2026-01-10 03:35:30,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:36:05] 2026-01-10 03:35:30,913 | INFO     | collected zombie processes
[2026-01-09 22:36:05] 2026-01-10 03:35:30,913 | INFO     | will attempt to kill all subprocesses of pid=1699889
[2026-01-09 22:36:05] 2026-01-10 03:35:31,647 | INFO     | process IDs to be killed: [1699889] (in reverse order)
[2026-01-09 22:36:05] 2026-01-10 03:35:31,779 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:36:05] 2026-01-10 03:35:31,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:36:05] 2026-01-10 03:35:31,798 | INFO     | did not find any defunct processes belonging to 1699889
[2026-01-09 22:36:05] 2026-01-10 03:35:31,827 | INFO     | did not find any defunct processes belonging to 1699889
[2026-01-09 22:36:05] 2026-01-10 03:35:31,827 | INFO     | ready for new job
[2026-01-09 22:36:05] 2026-01-10 03:35:31,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:36:05] 2026-01-10 03:35:31,831 | INFO     | ***************************************
[2026-01-09 22:36:05] 2026-01-10 03:35:31,831 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:36:05] 2026-01-10 03:35:31,832 | INFO     | ***************************************
[2026-01-09 22:36:05] 2026-01-10 03:35:31,832 | INFO     | 
[2026-01-09 22:36:05] 2026-01-10 03:35:31,875 | INFO     | architecture information:
[2026-01-09 22:36:05] 2026-01-10 03:35:31,886 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:36:05] 2026-01-10 03:35:31,995 | INFO     | cat /etc/os-release:
[2026-01-09 22:36:05] NAME="CentOS Linux"
[2026-01-09 22:36:05] VERSION="7 (Core)"
[2026-01-09 22:36:05] ID="centos"
[2026-01-09 22:36:05] ID_LIKE="rhel fedora"
[2026-01-09 22:36:05] VERSION_ID="7"
[2026-01-09 22:36:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:36:05] ANSI_COLOR="0;31"
[2026-01-09 22:36:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:36:05] HOME_URL="https://www.centos.org/"
[2026-01-09 22:36:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:36:05] 
[2026-01-09 22:36:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:36:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:36:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:36:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:36:05] 
[2026-01-09 22:36:05] 2026-01-10 03:35:31,995 | INFO     | ***************************************
[2026-01-09 22:36:05] 2026-01-10 03:35:32,499 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 22:36:05] 2026-01-10 03:35:32,569 | INFO     | sufficient remaining disk space (75043438592 B)
[2026-01-09 22:36:05] 2026-01-10 03:35:32,569 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:36:05] 2026-01-10 03:35:32,569 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:36:05] 2026-01-10 03:35:32,570 | INFO     | update_server=False
[2026-01-09 22:36:05] 2026-01-10 03:35:32,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:36:05] 2026-01-10 03:35:32,687 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:36:05] 2026-01-10 03:35:32,689 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:36:05] 2026-01-10 03:35:32,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:36:05] 2026-01-10 03:35:32,690 | INFO     | will abort loop
[2026-01-09 22:36:05] 2026-01-10 03:35:32,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:36:05] 2026-01-10 03:35:32,782 | INFO     | all payload control threads have been joined
[2026-01-09 22:36:05] 2026-01-10 03:35:33,576 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:33,580 | INFO     | all data control threads have been joined
[2026-01-09 22:36:05] 2026-01-10 03:35:33,696 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:33,788 | INFO     | [payload] control thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:33,871 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,115 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,142 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,232 | INFO     | all job control threads have been joined
[2026-01-09 22:36:05] 2026-01-10 03:35:34,252 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,290 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,320 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,586 | INFO     | [data] control thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,708 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,840 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,844 | INFO     | [job] validate thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:34,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:36:05] 2026-01-10 03:35:35,238 | INFO     | [job] control thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:35,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:36:05] 2026-01-10 03:35:35,876 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:39,427 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:36:05] 2026-01-10 03:35:39,914 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:36:05] 2026-01-10 03:35:41,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123207321408)>', '<ExcThread(monitor, started 140122460759808)>']
[2026-01-09 22:36:05] 2026-01-10 03:35:46,910 | INFO     | all workflow threads have been joined
[2026-01-09 22:36:05] 2026-01-10 03:35:46,910 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:36:05] 2026-01-10 03:35:46,910 | INFO     | traces error code: 0
[2026-01-09 22:36:05] 2026-01-10 03:35:46,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:36:05] 2026-01-10 03:36:03,247 | INFO     | PID=1688824 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:36:05] 2026-01-10 03:36:03,248 | INFO     | .. there are 15 such processes running
[2026-01-09 22:36:05] 2026-01-10 03:36:03,248 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:36:05] 2026-01-10 03:36:03,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:36:05] 2026-01-10 03:36:03,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:36:05] 2026-01-10 03:36:03,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:36:05] 2026-01-10 03:36:03,248 | INFO     | [monitor] control thread has ended
[2026-01-09 22:36:05] 2026-01-10 03:36:03,782 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:36:05] 2026-01-10 03:36:03,825 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:36:05] 2026-01-10 03:36:03,862 [wrapper] pilotpid: 1688824
[2026-01-09 22:36:05] 2026-01-10 03:36:03,905 [wrapper] Pilot exit status: 0
[2026-01-09 22:36:05] 2026-01-10 03:36:04,041 [wrapper] pandaids: 6964556532
[2026-01-09 22:36:05] 2026-01-10 03:36:04,715 [wrapper] cleanup supervisor_pilot 2446033 1688825
[2026-01-09 22:36:05] 2026-01-10 03:36:04,774 [wrapper] Test setup, not cleaning
[2026-01-09 22:36:05] 2026-01-10 03:36:04,826 [wrapper] apfmon messages muted
[2026-01-09 22:36:05] 2026-01-10 03:36:04,858 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:36:05] 2026-01-10 03:36:04,861 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:36:05]  *** Error codes and diagnostics ***
[2026-01-09 22:36:05]     "exeErrorCode": 0,
[2026-01-09 22:36:05]     "exeErrorDiag": "",
[2026-01-09 22:36:05]     "pilotErrorCode": 0,
[2026-01-09 22:36:05]     "pilotErrorDiag": "",
[2026-01-09 22:36:05]  *** Listing of results directory ***
[2026-01-09 22:36:05] total 451760
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 11:24 queuedata.json
[2026-01-09 22:36:05] -rwx------. 1 boincer umatlas     36322 Jan  9 11:24 runpilot2-wrapper.sh
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 11:24 pilot3.tar.gz
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:36:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:47 run_atlas
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:47 job.xml
[2026-01-09 22:36:05] -rw-r--r--. 2 boincer umatlas 228177540 Jan  9 16:47 EVNT.47898824._001369.pool.root.1
[2026-01-09 22:36:05] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 16:47 input.tar.gz
[2026-01-09 22:36:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:47 start_atlas.sh
[2026-01-09 22:36:05] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:47 shared
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:47 boinc_lockfile
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas      2517 Jan  9 16:47 pandaJob.out
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas        57 Jan  9 16:47 setup.sh.local
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas    989398 Jan  9 16:48 agis_schedconf.cvmfs.json
[2026-01-09 22:36:05] drwx------. 5 boincer umatlas      4096 Jan  9 16:49 pilot3
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 22:30 init_data.xml
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas 224051082 Jan  9 22:34 HITS.47898826._040126.pool.root.1
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas       530 Jan  9 22:34 boinc_task_state.xml
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas      1042 Jan  9 22:35 memory_monitor_summary.json
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas    537046 Jan  9 22:35 log.47898826._040126.job.log.tgz.1
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas      7771 Jan  9 22:35 heartbeat.json
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas        95 Jan  9 22:35 pilot_heartbeat.json
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:35 boinc_mmap_file
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:35 wrapper_checkpoint.txt
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas       823 Jan  9 22:36 pilotlog.txt
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas   2694153 Jan  9 22:36 log.47898826._040126.job.log.1
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas       357 Jan  9 22:36 output.list
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:36 runtime_log
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas   3246080 Jan  9 22:36 result.tar.gz
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 22:36 runtime_log.err
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas       655 Jan  9 22:36 QjXMDmFTUy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmugmKDmbk02Nn.diag
[2026-01-09 22:36:05] -rw-r--r--. 1 boincer umatlas     21499 Jan  9 22:36 stderr.txt
[2026-01-09 22:36:05] HITS file was successfully produced:
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas 224051082 Jan  9 22:34 shared/HITS.pool.root.1
[2026-01-09 22:36:05]  *** Contents of shared directory: ***
[2026-01-09 22:36:05] total 445408
[2026-01-09 22:36:05] -rw-r--r--. 2 boincer umatlas 228177540 Jan  9 16:47 ATLAS.root_0
[2026-01-09 22:36:05] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 16:47 input.tar.gz
[2026-01-09 22:36:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:47 start_atlas.sh
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas 224051082 Jan  9 22:34 HITS.pool.root.1
[2026-01-09 22:36:05] -rw-------. 1 boincer umatlas   3246080 Jan  9 22:36 result.tar.gz
22:36:06 (1684326): run_atlas exited; CPU time 47738.637929
22:36:06 (1684326): called boinc_finish(0)

</stderr_txt>
]]>

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