Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:00:56 (3405217): wrapper (7.7.26015): starting
18:00:56 (3405217): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 18:00:56] Arguments: --nthreads 9
[2026-01-09 18:00:56] Threads: 9
[2026-01-09 18:00:56] Checking for CVMFS
[2026-01-09 18:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:00:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:00:58] 2.13.3.0 11772 93997 228508 154959 3 191 21533154 32935937 20691 16776704 0 503893970 99.507 664298094 36865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:00:58] CVMFS is ok
[2026-01-09 18:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:00:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:00:58] Further information can be found at the LHC@home message board.
[2026-01-09 18:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:00:58] Checking for apptainer binary...
[2026-01-09 18:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:00:58] Running /usr/bin/apptainer --version
[2026-01-09 18:00:58] apptainer version 1.4.5-2.el9
[2026-01-09 18:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:00:59] c7-3-28.aglt2.org
[2026-01-09 18:00:59] apptainer works
[2026-01-09 18:00:59] Set ATHENA_PROC_NUMBER=9
[2026-01-09 18:00:59] Set ATHENA_CORE_NUMBER=9
[2026-01-09 18:00:59] Starting ATLAS job with PandaID=6963167873
[2026-01-09 18:00:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:40:08 (3405217): BOINC client no longer exists - exiting
21:40:08 (3405217): timer handler: client dead, exiting
21:40:44 (735575): wrapper (7.7.26015): starting
21:40:44 (735575): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:40:44] Arguments: --nthreads 8
[2026-01-09 21:40:44] Threads: 8
[2026-01-09 21:40:44] This job has been restarted, cleaning up previous attempt
[2026-01-09 21:40:44] Checking for CVMFS
[2026-01-09 21:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:40:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:40:45] 2.13.3.0 11772 94217 231020 154964 3 152 23691059 32935937 18060 16776704 0 504884444 99.508 664692656 36866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:40:45] CVMFS is ok
[2026-01-09 21:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:40:45] Further information can be found at the LHC@home message board.
[2026-01-09 21:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:40:45] Checking for apptainer binary...
[2026-01-09 21:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:40:45] Running /usr/bin/apptainer --version
[2026-01-09 21:40:45] apptainer version 1.4.5-2.el9
[2026-01-09 21:40:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:40:45] c7-3-28.aglt2.org
[2026-01-09 21:40:45] apptainer works
[2026-01-09 21:40:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:40:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:40:45] Starting ATLAS job with PandaID=6963167873
[2026-01-09 21:40:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:26:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:26:45] 2026-01-10 09:25:52,003 | INFO     | sum of square deviations: 18821595166.86008
[2026-01-10 04:26:45] 2026-01-10 09:25:52,006 | INFO     | sum of deviations: 138517417247.77347
[2026-01-10 04:26:45] 2026-01-10 09:25:52,006 | INFO     | mean x: 1768024846.0737913
[2026-01-10 04:26:45] 2026-01-10 09:25:52,006 | INFO     | mean y: 2473864.628498728
[2026-01-10 04:26:45] 2026-01-10 09:25:52,006 | INFO     | intersect: -13009294433.270224
[2026-01-10 04:26:45] 2026-01-10 09:25:52,006 | INFO     | chi2: 1.51646400590832
[2026-01-10 04:26:45] 2026-01-10 09:25:52,006 | INFO     | current chi2=1.51646400590832 (change=-0.006259053093209618 %)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,007 | INFO     | right removable region: 392
[2026-01-10 04:26:45] 2026-01-10 09:25:52,007 | INFO     | sum of square deviations: 18821577476.86008
[2026-01-10 04:26:45] 2026-01-10 09:25:52,010 | INFO     | sum of deviations: 78699245538.0178
[2026-01-10 04:26:45] 2026-01-10 09:25:52,010 | INFO     | mean x: 1768025151.0737913
[2026-01-10 04:26:45] 2026-01-10 09:25:52,010 | INFO     | mean y: 2487807.82697201
[2026-01-10 04:26:45] 2026-01-10 09:25:52,010 | INFO     | intersect: -7390210580.648371
[2026-01-10 04:26:45] 2026-01-10 09:25:52,011 | INFO     | chi2: 0.10768036655772094
[2026-01-10 04:26:45] 2026-01-10 09:25:52,011 | INFO     | current chi2=0.10768036655772094 (change=92.89880235142587 %)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,011 | INFO     | sum of square deviations: 18112290216.832306
[2026-01-10 04:26:45] 2026-01-10 09:25:52,014 | INFO     | sum of deviations: 63288924500.847916
[2026-01-10 04:26:45] 2026-01-10 09:25:52,014 | INFO     | mean x: 1768025303.5747423
[2026-01-10 04:26:45] 2026-01-10 09:25:52,014 | INFO     | mean y: 2491121.2293814435
[2026-01-10 04:26:45] 2026-01-10 09:25:52,014 | INFO     | intersect: -6175436607.067608
[2026-01-10 04:26:45] 2026-01-10 09:25:52,015 | INFO     | chi2: 0.06907112129897743
[2026-01-10 04:26:45] 2026-01-10 09:25:52,015 | INFO     | current chi2=0.06907112129897743 (change=35.855417745116455 %)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,015 | INFO     | sum of square deviations: 17421049806.80427
[2026-01-10 04:26:45] 2026-01-10 09:25:52,018 | INFO     | sum of deviations: 48063121033.61358
[2026-01-10 04:26:45] 2026-01-10 09:25:52,018 | INFO     | mean x: 1768025456.075718
[2026-01-10 04:26:45] 2026-01-10 09:25:52,018 | INFO     | mean y: 2494480.496083551
[2026-01-10 04:26:45] 2026-01-10 09:25:52,018 | INFO     | intersect: -4875329900.253178
[2026-01-10 04:26:45] 2026-01-10 09:25:52,019 | INFO     | chi2: 0.027763893106597784
[2026-01-10 04:26:45] 2026-01-10 09:25:52,019 | INFO     | current chi2=0.027763893106597784 (change=59.80390562009188 %)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,019 | INFO     | sum of square deviations: 16747623684.275194
[2026-01-10 04:26:45] 2026-01-10 09:25:52,022 | INFO     | sum of deviations: 41991398683.3862
[2026-01-10 04:26:45] 2026-01-10 09:25:52,022 | INFO     | mean x: 1768025608.5767195
[2026-01-10 04:26:45] 2026-01-10 09:25:52,022 | INFO     | mean y: 2495844.521164021
[2026-01-10 04:26:45] 2026-01-10 09:25:52,022 | INFO     | intersect: -4430483401.477138
[2026-01-10 04:26:45] 2026-01-10 09:25:52,023 | INFO     | chi2: 0.009798207089157364
[2026-01-10 04:26:45] 2026-01-10 09:25:52,023 | INFO     | current chi2=0.009798207089157364 (change=64.70881424468196 %)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,023 | INFO     | sum of square deviations: 16091779286.745268
[2026-01-10 04:26:45] 2026-01-10 09:25:52,026 | INFO     | sum of deviations: 43034781968.21714
[2026-01-10 04:26:45] 2026-01-10 09:25:52,026 | INFO     | mean x: 1768025761.077748
[2026-01-10 04:26:45] 2026-01-10 09:25:52,027 | INFO     | mean y: 2495601.5442359247
[2026-01-10 04:26:45] 2026-01-10 09:25:52,027 | INFO     | intersect: -4725794650.662012
[2026-01-10 04:26:45] 2026-01-10 09:25:52,028 | INFO     | chi2: 0.007918141074149192
[2026-01-10 04:26:45] 2026-01-10 09:25:52,028 | INFO     | current chi2=0.007918141074149192 (change=19.187857512101793 %)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,028 | INFO     | left removable region: 50
[2026-01-10 04:26:45] 2026-01-10 09:25:52,028 | INFO     | sum of square deviations: 12403822955.207603
[2026-01-10 04:26:45] 2026-01-10 09:25:52,031 | INFO     | sum of deviations: 31069732872.36258
[2026-01-10 04:26:45] 2026-01-10 09:25:52,031 | INFO     | mean x: 1768026340.5818713
[2026-01-10 04:26:45] 2026-01-10 09:25:52,031 | INFO     | time since job start (24295s) is within the limit (349056.0s)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,031 | INFO     | mean y: 2497524.058479532
[2026-01-10 04:26:45] 2026-01-10 09:25:52,032 | INFO     | intersect: -4426145670.184862
[2026-01-10 04:26:45] 2026-01-10 09:25:52,032 | INFO     | chi2: 0.0013157492701282116
[2026-01-10 04:26:45] 2026-01-10 09:25:52,032 | INFO     | current memory leak: 2.50 B/s (using 342 data points, chi2=0.00)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,033 | INFO     | could have reported an average CPU frequency of 3190 MHz (17 samples)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | ..............................
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . Timing measurements:
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . get job = 0 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . initial setup = 2 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . payload setup = 6 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . stage-in = 0 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . payload execution = 24260 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . stage-out = 2 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | . log creation = 0 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,034 | INFO     | ..............................
[2026-01-10 04:26:45] 2026-01-10 09:25:52,115 | INFO     | 
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | job summary report
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | --------------------------------------------------
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | PanDA job id: 6963167873
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | task id: 47898826
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | errors: (none)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | pilot state: finished 
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | transexitcode: 0
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | exeerrorcode: 0
[2026-01-10 04:26:45] 2026-01-10 09:25:52,116 | INFO     | exeerrordiag: 
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | exitcode: 0
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | exitmsg: OK
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | cpuconsumptiontime: 44241 s
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | nevents: 400
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | neventsw: 0
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | pid: 787186
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | pgrp: 787186
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | corecount: 8
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | event service: False
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | sizes: {0: 2283969, 6: 2284231, 11: 2284259, 24271: 2319695, 24273: 2329129, 24278: 2329331}
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | --------------------------------------------------
[2026-01-10 04:26:45] 2026-01-10 09:25:52,117 | INFO     | 
[2026-01-10 04:26:45] 2026-01-10 09:25:52,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 04:26:45] 2026-01-10 09:25:52,144 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | job 6963167873 has completed (purged errors)
[2026-01-10 04:26:45] 2026-01-10 09:25:52,146 | INFO     | overall cleanup function is called
[2026-01-10 04:26:45] 2026-01-10 09:25:53,155 | INFO     | --- collectZombieJob: --- 10, [787186]
[2026-01-10 04:26:45] 2026-01-10 09:25:53,155 | INFO     | zombie collector waiting for pid 787186
[2026-01-10 04:26:45] 2026-01-10 09:25:53,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:26:45] 2026-01-10 09:25:53,156 | INFO     | collected zombie processes
[2026-01-10 04:26:45] 2026-01-10 09:25:53,156 | INFO     | will attempt to kill all subprocesses of pid=787186
[2026-01-10 04:26:45] 2026-01-10 09:25:53,546 | INFO     | process IDs to be killed: [787186] (in reverse order)
[2026-01-10 04:26:45] 2026-01-10 09:25:53,701 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:26:45] 2026-01-10 09:25:53,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:26:45] 2026-01-10 09:25:53,722 | INFO     | did not find any defunct processes belonging to 787186
[2026-01-10 04:26:45] 2026-01-10 09:25:53,742 | INFO     | did not find any defunct processes belonging to 787186
[2026-01-10 04:26:45] 2026-01-10 09:25:53,742 | INFO     | ready for new job
[2026-01-10 04:26:45] 2026-01-10 09:25:53,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:26:45] 2026-01-10 09:25:53,746 | INFO     | ***************************************
[2026-01-10 04:26:45] 2026-01-10 09:25:53,746 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:26:45] 2026-01-10 09:25:53,746 | INFO     | ***************************************
[2026-01-10 04:26:45] 2026-01-10 09:25:53,746 | INFO     | 
[2026-01-10 04:26:45] 2026-01-10 09:25:53,751 | INFO     | architecture information:
[2026-01-10 04:26:45] 2026-01-10 09:25:53,752 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:26:45] 2026-01-10 09:25:53,774 | INFO     | cat /etc/os-release:
[2026-01-10 04:26:45] NAME="CentOS Linux"
[2026-01-10 04:26:45] VERSION="7 (Core)"
[2026-01-10 04:26:45] ID="centos"
[2026-01-10 04:26:45] ID_LIKE="rhel fedora"
[2026-01-10 04:26:45] VERSION_ID="7"
[2026-01-10 04:26:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:26:45] ANSI_COLOR="0;31"
[2026-01-10 04:26:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:26:45] HOME_URL="https://www.centos.org/"
[2026-01-10 04:26:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:26:45] 
[2026-01-10 04:26:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:26:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:26:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:26:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:26:45] 
[2026-01-10 04:26:45] 2026-01-10 09:25:53,774 | INFO     | ***************************************
[2026-01-10 04:26:45] 2026-01-10 09:25:54,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 04:26:45] 2026-01-10 09:25:54,302 | INFO     | sufficient remaining disk space (74827431936 B)
[2026-01-10 04:26:45] 2026-01-10 09:25:54,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:26:45] 2026-01-10 09:25:54,303 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:26:45] 2026-01-10 09:25:54,303 | INFO     | update_server=False
[2026-01-10 04:26:45] 2026-01-10 09:25:54,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:26:45] 2026-01-10 09:25:54,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:26:45] 2026-01-10 09:25:54,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:26:45] 2026-01-10 09:25:54,304 | INFO     | aborting loop
[2026-01-10 04:26:45] 2026-01-10 09:25:54,554 | INFO     | all data control threads have been joined
[2026-01-10 04:26:45] 2026-01-10 09:25:54,759 | INFO     | all payload control threads have been joined
[2026-01-10 04:26:45] 2026-01-10 09:25:54,923 | INFO     | all job control threads have been joined
[2026-01-10 04:26:45] 2026-01-10 09:25:55,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:26:45] 2026-01-10 09:25:55,305 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,309 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,555 | INFO     | [data] control thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,759 | INFO     | [payload] control thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,818 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,864 | INFO     | [job] validate thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,925 | INFO     | [job] control thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,959 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:55,970 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:56,261 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:56,640 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:56,718 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:57,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:26:45] 2026-01-10 09:25:57,296 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:57,575 [wrapper] supervise_pilot (15 min periods counter: 28)
[2026-01-10 04:26:45] 2026-01-10 09:25:58,133 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:25:58,313 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:26:05,107 | INFO     | job.realtimelogging is not enabled
[2026-01-10 04:26:45] 2026-01-10 09:26:06,113 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:26:45] 2026-01-10 09:26:25,572 | INFO     | PID=754275 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:26:45] 2026-01-10 09:26:25,572 | INFO     | .. there are 27 such processes running
[2026-01-10 04:26:45] 2026-01-10 09:26:25,572 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:26:45] 2026-01-10 09:26:25,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:26:45] 2026-01-10 09:26:25,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:26:45] 2026-01-10 09:26:39,084 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:26:45] 2026-01-10 09:26:40,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865522538304)>', '<ExcThread(monitor, started 139865156982528)>']
[2026-01-10 04:26:45] 2026-01-10 09:26:40,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:26:45] 2026-01-10 09:26:40,640 | INFO     | [monitor] control thread has ended
[2026-01-10 04:26:45] 2026-01-10 09:26:45,205 | INFO     | all workflow threads have been joined
[2026-01-10 04:26:45] 2026-01-10 09:26:45,206 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:26:45] 2026-01-10 09:26:45,207 | INFO     | traces error code: 0
[2026-01-10 04:26:45] 2026-01-10 09:26:45,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:26:45] 2026-01-10 09:26:45,404 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:26:45] 2026-01-10 09:26:45,407 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:26:45] 2026-01-10 09:26:45,409 [wrapper] pilotpid: 754275
[2026-01-10 04:26:45] 2026-01-10 09:26:45,412 [wrapper] Pilot exit status: 0
[2026-01-10 04:26:45] 2026-01-10 09:26:45,423 [wrapper] pandaids: 6963167873 6963167873
[2026-01-10 04:26:45] 2026-01-10 09:26:45,526 [wrapper] cleanup supervisor_pilot 3179592 754277
[2026-01-10 04:26:45] 2026-01-10 09:26:45,530 [wrapper] Test setup, not cleaning
[2026-01-10 04:26:45] 2026-01-10 09:26:45,533 [wrapper] apfmon messages muted
[2026-01-10 04:26:45] 2026-01-10 09:26:45,536 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:26:45] 2026-01-10 09:26:45,539 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:26:45]  *** Error codes and diagnostics ***
[2026-01-10 04:26:45]     "exeErrorCode": 0,
[2026-01-10 04:26:45]     "exeErrorDiag": "",
[2026-01-10 04:26:45]     "pilotErrorCode": 0,
[2026-01-10 04:26:45]     "pilotErrorDiag": "",
[2026-01-10 04:26:45]  *** Listing of results directory ***
[2026-01-10 04:26:45] total 664472
[2026-01-10 04:26:45] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-10 04:26:45] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:26:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:00 run_atlas
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:00 job.xml
[2026-01-10 04:26:45] -rw-r--r--. 3 boincer umatlas 224693909 Jan  9 18:00 EVNT.47898824._001342.pool.root.1
[2026-01-10 04:26:45] -rw-r--r--. 3 boincer umatlas 224693909 Jan  9 18:00 ATLAS.root_0
[2026-01-10 04:26:45] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 18:00 input.tar.gz
[2026-01-10 04:26:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:00 start_atlas.sh
[2026-01-10 04:26:45] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:00 shared
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:00 boinc_lockfile
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 21:40 pandaJob.out
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas        57 Jan  9 21:40 setup.sh.local
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas    989382 Jan  9 21:40 agis_schedconf.cvmfs.json
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas      6945 Jan 10 04:19 init_data.xml
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas 219521374 Jan 10 04:25 HITS.47898826._036075.pool.root.1
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas       531 Jan 10 04:25 boinc_task_state.xml
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas      1059 Jan 10 04:25 memory_monitor_summary.json
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas    586144 Jan 10 04:25 log.47898826._036075.job.log.tgz.1
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas        95 Jan 10 04:25 pilot_heartbeat.json
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas      7794 Jan 10 04:25 heartbeat.json
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas        28 Jan 10 04:26 wrapper_checkpoint.txt
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:26 boinc_mmap_file
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas      4895 Jan 10 04:26 pilotlog.txt
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas   3208994 Jan 10 04:26 log.47898826._036075.job.log.1
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas       357 Jan 10 04:26 output.list
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:26 runtime_log
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas   3809280 Jan 10 04:26 result.tar.gz
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas       784 Jan 10 04:26 UTVKDm1zFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEdgKDmwLaJbn.diag
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas      9423 Jan 10 04:26 runtime_log.err
[2026-01-10 04:26:45] -rw-r--r--. 1 boincer umatlas     23312 Jan 10 04:26 stderr.txt
[2026-01-10 04:26:45] HITS file was successfully produced:
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas 219521374 Jan 10 04:25 shared/HITS.pool.root.1
[2026-01-10 04:26:45]  *** Contents of shared directory: ***
[2026-01-10 04:26:45] total 438132
[2026-01-10 04:26:45] -rw-r--r--. 3 boincer umatlas 224693909 Jan  9 18:00 ATLAS.root_0
[2026-01-10 04:26:45] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 18:00 input.tar.gz
[2026-01-10 04:26:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:00 start_atlas.sh
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas 219521374 Jan 10 04:25 HITS.pool.root.1
[2026-01-10 04:26:45] -rw-------. 1 boincer umatlas   3809280 Jan 10 04:26 result.tar.gz
04:26:47 (735575): run_atlas exited; CPU time 45294.379010
04:26:47 (735575): called boinc_finish(0)

</stderr_txt>
]]>

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