Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:57:55 (4066566): wrapper (7.7.26015): starting
19:57:55 (4066566): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:57:55] Arguments: --nthreads 8
[2026-01-09 19:57:55] Threads: 8
[2026-01-09 19:57:55] Checking for CVMFS
[2026-01-09 19:57:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:57:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:57:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:57:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:57:56] 2.13.3.0 7558 94160 369304 154962 2 382 31787114 32935936 12318 16776704 0 296995810 99.475 419149395 38702 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:57:56] CVMFS is ok
[2026-01-09 19:57:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:57:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:57:57] Further information can be found at the LHC@home message board.
[2026-01-09 19:57:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:57:57] Checking for apptainer binary...
[2026-01-09 19:57:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:57:57] Running /usr/bin/apptainer --version
[2026-01-09 19:57:57] apptainer version 1.4.5-2.el9
[2026-01-09 19:57:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:57:57] c6-6-39-2.aglt2.org
[2026-01-09 19:57:57] apptainer works
[2026-01-09 19:57:57] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:57:57] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:57:57] Starting ATLAS job with PandaID=6963194240
[2026-01-09 19:57:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:05:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:05:38] 2026-01-10 12:04:54,245 | INFO     | extracted standard info from prmon json
[2026-01-10 07:05:38] 2026-01-10 12:04:54,246 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:05:38] 2026-01-10 12:04:54,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:05:38] 2026-01-10 12:04:54,257 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:05:38] 2026-01-10 12:04:54,258 | INFO     | sum of square deviations: 87119819346.38159
[2026-01-10 07:05:38] 2026-01-10 12:04:54,267 | INFO     | sum of deviations: 559870542298.489
[2026-01-10 07:05:38] 2026-01-10 12:04:54,267 | INFO     | mean x: 1768026709.9160306
[2026-01-10 07:05:38] 2026-01-10 12:04:54,267 | INFO     | mean y: 2771814.972519084
[2026-01-10 07:05:38] 2026-01-10 12:04:54,267 | INFO     | intersect: -11359350837.546667
[2026-01-10 07:05:38] 2026-01-10 12:04:54,268 | INFO     | chi2: 8.92998396149392
[2026-01-10 07:05:38] 2026-01-10 12:04:54,269 | INFO     | sum of square deviations: 85140494427.1153
[2026-01-10 07:05:38] 2026-01-10 12:04:54,277 | INFO     | sum of deviations: 763786986739.978
[2026-01-10 07:05:38] 2026-01-10 12:04:54,277 | INFO     | mean x: 1768026557.4538462
[2026-01-10 07:05:38] 2026-01-10 12:04:54,277 | INFO     | mean y: 2787517.7492307695
[2026-01-10 07:05:38] 2026-01-10 12:04:54,277 | INFO     | intersect: -15858004528.154837
[2026-01-10 07:05:38] 2026-01-10 12:04:54,278 | INFO     | chi2: 5.904159081936811
[2026-01-10 07:05:38] 2026-01-10 12:04:54,278 | INFO     | current chi2=5.904159081936811 (change=33.88387809658406 %)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,279 | INFO     | sum of square deviations: 83191402630.96141
[2026-01-10 07:05:38] 2026-01-10 12:04:54,287 | INFO     | sum of deviations: 947576926002.5037
[2026-01-10 07:05:38] 2026-01-10 12:04:54,288 | INFO     | mean x: 1768026404.992248
[2026-01-10 07:05:38] 2026-01-10 12:04:54,288 | INFO     | mean y: 2801873.9007751937
[2026-01-10 07:05:38] 2026-01-10 12:04:54,288 | INFO     | intersect: -20135589509.709568
[2026-01-10 07:05:38] 2026-01-10 12:04:54,289 | INFO     | chi2: 3.249729473983935
[2026-01-10 07:05:38] 2026-01-10 12:04:54,289 | INFO     | current chi2=3.249729473983935 (change=44.95863968289473 %)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,290 | INFO     | sum of square deviations: 81271879895.87329
[2026-01-10 07:05:38] 2026-01-10 12:04:54,298 | INFO     | sum of deviations: 1009044332731.2216
[2026-01-10 07:05:38] 2026-01-10 12:04:54,299 | INFO     | mean x: 1768026252.5140624
[2026-01-10 07:05:38] 2026-01-10 12:04:54,299 | INFO     | mean y: 2806749.753125
[2026-01-10 07:05:38] 2026-01-10 12:04:54,299 | INFO     | intersect: -21948412694.229748
[2026-01-10 07:05:38] 2026-01-10 12:04:54,300 | INFO     | chi2: 2.839871846076358
[2026-01-10 07:05:38] 2026-01-10 12:04:54,300 | INFO     | current chi2=2.839871846076358 (change=12.612053747511517 %)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,300 | INFO     | right removable region: 639
[2026-01-10 07:05:38] 2026-01-10 12:04:54,301 | INFO     | sum of square deviations: 85138530227.11528
[2026-01-10 07:05:38] 2026-01-10 12:04:54,309 | INFO     | sum of deviations: 368897518611.746
[2026-01-10 07:05:38] 2026-01-10 12:04:54,309 | INFO     | mean x: 1768026862.4538462
[2026-01-10 07:05:38] 2026-01-10 12:04:54,309 | INFO     | mean y: 2786501.0415384616
[2026-01-10 07:05:38] 2026-01-10 12:04:54,309 | INFO     | intersect: -7657913309.705401
[2026-01-10 07:05:38] 2026-01-10 12:04:54,310 | INFO     | chi2: 6.504680637882919
[2026-01-10 07:05:38] 2026-01-10 12:04:54,310 | INFO     | current chi2=6.504680637882919 (change=27.15910055459119 %)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,311 | INFO     | sum of square deviations: 83188305096.95184
[2026-01-10 07:05:38] 2026-01-10 12:04:54,319 | INFO     | sum of deviations: 316166852375.5633
[2026-01-10 07:05:38] 2026-01-10 12:04:54,320 | INFO     | mean x: 1768027014.9596899
[2026-01-10 07:05:38] 2026-01-10 12:04:54,320 | INFO     | mean y: 2790616.0217054263
[2026-01-10 07:05:38] 2026-01-10 12:04:54,320 | INFO     | intersect: -6716802187.116803
[2026-01-10 07:05:38] 2026-01-10 12:04:54,321 | INFO     | chi2: 6.315727058051917
[2026-01-10 07:05:38] 2026-01-10 12:04:54,321 | INFO     | current chi2=6.315727058051917 (change=2.904886348002187 %)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,321 | INFO     | left removable region: 20
[2026-01-10 07:05:38] 2026-01-10 12:04:54,322 | INFO     | sum of square deviations: 73530339970.96016
[2026-01-10 07:05:38] 2026-01-10 12:04:54,329 | INFO     | sum of deviations: 695300755907.3553
[2026-01-10 07:05:38] 2026-01-10 12:04:54,329 | INFO     | mean x: 1768026831.9919224
[2026-01-10 07:05:38] 2026-01-10 12:04:54,329 | INFO     | mean y: 2832782.071082391
[2026-01-10 07:05:38] 2026-01-10 12:04:54,329 | INFO     | intersect: -16715577512.699352
[2026-01-10 07:05:38] 2026-01-10 12:04:54,330 | INFO     | chi2: 0.0979786924708165
[2026-01-10 07:05:38] 2026-01-10 12:04:54,330 | INFO     | current memory leak: 9.46 B/s (using 619 data points, chi2=0.10)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,331 | INFO     | could have reported an average CPU frequency of 2937 MHz (25 samples)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,331 | INFO     | ..............................
[2026-01-10 07:05:38] 2026-01-10 12:04:54,331 | INFO     | . Timing measurements:
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . get job = 0 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . initial setup = 3 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . payload setup = 18 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . stage-in = 0 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . payload execution = 39908 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . stage-out = 5 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | . log creation = 1 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,332 | INFO     | ..............................
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | 
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | job summary report
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | --------------------------------------------------
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | PanDA job id: 6963194240
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | task id: 47962010
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | errors: (none)
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:05:38] 2026-01-10 12:04:54,892 | INFO     | pilot state: finished 
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | transexitcode: 0
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | exeerrorcode: 0
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | exeerrordiag: 
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | exitcode: 0
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | exitmsg: OK
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | cpuconsumptiontime: 131339 s
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | nevents: 450
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | neventsw: 0
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | pid: 4083282
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | pgrp: 4083282
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | corecount: 8
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | event service: False
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | sizes: {0: 2284620, 8: 2284882, 11: 2284910, 39931: 2328251, 39932: 2328250, 39937: 2337300, 39940: 2337484, 39965: 2337794}
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | --------------------------------------------------
[2026-01-10 07:05:38] 2026-01-10 12:04:54,893 | INFO     | 
[2026-01-10 07:05:38] 2026-01-10 12:04:54,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 07:05:38] 2026-01-10 12:04:55,089 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,089 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,091 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:05:38] 2026-01-10 12:04:55,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,091 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:05:38] 2026-01-10 12:04:55,091 | INFO     | job 6963194240 has completed (purged errors)
[2026-01-10 07:05:38] 2026-01-10 12:04:55,091 | INFO     | overall cleanup function is called
[2026-01-10 07:05:38] 2026-01-10 12:04:56,130 | INFO     | --- collectZombieJob: --- 10, [4083282]
[2026-01-10 07:05:38] 2026-01-10 12:04:56,140 | INFO     | zombie collector waiting for pid 4083282
[2026-01-10 07:05:38] 2026-01-10 12:04:56,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:05:38] 2026-01-10 12:04:56,140 | INFO     | collected zombie processes
[2026-01-10 07:05:38] 2026-01-10 12:04:56,140 | INFO     | will attempt to kill all subprocesses of pid=4083282
[2026-01-10 07:05:38] 2026-01-10 12:04:56,661 | INFO     | process IDs to be killed: [4083282] (in reverse order)
[2026-01-10 07:05:38] 2026-01-10 12:04:56,765 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:05:38] 2026-01-10 12:04:56,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:05:38] 2026-01-10 12:04:56,850 | INFO     | did not find any defunct processes belonging to 4083282
[2026-01-10 07:05:38] 2026-01-10 12:04:56,960 | INFO     | did not find any defunct processes belonging to 4083282
[2026-01-10 07:05:38] 2026-01-10 12:04:56,961 | INFO     | ready for new job
[2026-01-10 07:05:38] 2026-01-10 12:04:56,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:05:38] 2026-01-10 12:04:57,000 | INFO     | ***************************************
[2026-01-10 07:05:38] 2026-01-10 12:04:57,001 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:05:38] 2026-01-10 12:04:57,001 | INFO     | ***************************************
[2026-01-10 07:05:38] 2026-01-10 12:04:57,001 | INFO     | 
[2026-01-10 07:05:38] 2026-01-10 12:04:57,041 | INFO     | architecture information:
[2026-01-10 07:05:38] 2026-01-10 12:04:57,060 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:05:38] 2026-01-10 12:04:57,232 | INFO     | cat /etc/os-release:
[2026-01-10 07:05:38] NAME="CentOS Linux"
[2026-01-10 07:05:38] VERSION="7 (Core)"
[2026-01-10 07:05:38] ID="centos"
[2026-01-10 07:05:38] ID_LIKE="rhel fedora"
[2026-01-10 07:05:38] VERSION_ID="7"
[2026-01-10 07:05:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:05:38] ANSI_COLOR="0;31"
[2026-01-10 07:05:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:05:38] HOME_URL="https://www.centos.org/"
[2026-01-10 07:05:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:05:38] 
[2026-01-10 07:05:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:05:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:05:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:05:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:05:38] 
[2026-01-10 07:05:38] 2026-01-10 12:04:57,232 | INFO     | ***************************************
[2026-01-10 07:05:38] 2026-01-10 12:04:57,736 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 07:05:38] 2026-01-10 12:04:57,932 | INFO     | sufficient remaining disk space (74851549184 B)
[2026-01-10 07:05:38] 2026-01-10 12:04:57,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:05:38] 2026-01-10 12:04:57,933 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:05:38] 2026-01-10 12:04:57,933 | INFO     | update_server=False
[2026-01-10 07:05:38] 2026-01-10 12:04:57,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:05:38] 2026-01-10 12:04:57,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:05:38] 2026-01-10 12:04:57,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:05:38] 2026-01-10 12:04:57,959 | INFO     | aborting loop
[2026-01-10 07:05:38] 2026-01-10 12:04:58,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:05:38] 2026-01-10 12:04:58,940 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:58,959 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:58,970 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:59,007 | INFO     | all job control threads have been joined
[2026-01-10 07:05:38] 2026-01-10 12:04:59,024 | INFO     | all data control threads have been joined
[2026-01-10 07:05:38] 2026-01-10 12:04:59,111 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:59,129 | INFO     | all payload control threads have been joined
[2026-01-10 07:05:38] 2026-01-10 12:04:59,185 | INFO     | [job] validate thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:59,281 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:59,286 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:59,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:05:38] 2026-01-10 12:04:59,941 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:04:59,964 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:00,012 | INFO     | [job] control thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:00,030 | INFO     | [data] control thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:00,135 | INFO     | [payload] control thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:00,167 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:00,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:00,468 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:02,434 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:05:38] 2026-01-10 12:05:27,936 | INFO     | PID=4075656 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:05:38] 2026-01-10 12:05:27,938 | INFO     | .. there are 11 such processes running
[2026-01-10 07:05:38] 2026-01-10 12:05:27,939 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:05:38] 2026-01-10 12:05:27,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:05:38] 2026-01-10 12:05:27,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:05:38] 2026-01-10 12:05:29,424 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:05:38] 2026-01-10 12:05:30,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160440776512)>', '<ExcThread(monitor, started 140159949469440)>']
[2026-01-10 07:05:38] 2026-01-10 12:05:30,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:05:38] 2026-01-10 12:05:30,973 | INFO     | [monitor] control thread has ended
[2026-01-10 07:05:38] 2026-01-10 12:05:35,971 | INFO     | all workflow threads have been joined
[2026-01-10 07:05:38] 2026-01-10 12:05:35,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:05:38] 2026-01-10 12:05:35,971 | INFO     | traces error code: 0
[2026-01-10 07:05:38] 2026-01-10 12:05:35,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:05:38] 2026-01-10 12:05:36,504 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:05:38] 2026-01-10 12:05:36,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:05:38] 2026-01-10 12:05:36,586 [wrapper] pilotpid: 4075656
[2026-01-10 07:05:38] 2026-01-10 12:05:36,590 [wrapper] Pilot exit status: 0
[2026-01-10 07:05:38] 2026-01-10 12:05:36,729 [wrapper] pandaids: 6963194240
[2026-01-10 07:05:38] 2026-01-10 12:05:37,356 [wrapper] cleanup supervisor_pilot 2133012 4075657
[2026-01-10 07:05:38] 2026-01-10 12:05:37,421 [wrapper] Test setup, not cleaning
[2026-01-10 07:05:38] 2026-01-10 12:05:37,548 [wrapper] apfmon messages muted
[2026-01-10 07:05:38] 2026-01-10 12:05:37,725 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:05:38] 2026-01-10 12:05:38,059 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:05:38]  *** Error codes and diagnostics ***
[2026-01-10 07:05:38]     "exeErrorCode": 0,
[2026-01-10 07:05:38]     "exeErrorDiag": "",
[2026-01-10 07:05:38]     "pilotErrorCode": 0,
[2026-01-10 07:05:38]     "pilotErrorDiag": "",
[2026-01-10 07:05:38]  *** Listing of results directory ***
[2026-01-10 07:05:38] total 796676
[2026-01-10 07:05:38] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:05:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:57 run_atlas
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:57 job.xml
[2026-01-10 07:05:38] -rw-r--r--. 2 boincer umatlas 395458336 Jan  9 19:57 EVNT.47962006._000056.pool.root.1
[2026-01-10 07:05:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:57 start_atlas.sh
[2026-01-10 07:05:38] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:57 shared
[2026-01-10 07:05:38] -rw-r--r--. 2 boincer umatlas    592610 Jan  9 19:57 input.tar.gz
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:57 boinc_lockfile
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 19:57 pandaJob.out
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas        57 Jan  9 19:57 setup.sh.local
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas    989374 Jan  9 19:58 agis_schedconf.cvmfs.json
[2026-01-10 07:05:38] drwx------. 5 boincer umatlas      4096 Jan  9 19:58 pilot3
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas       533 Jan 10 06:45 boinc_task_state.xml
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas      6844 Jan 10 07:00 init_data.xml
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas 402874436 Jan 10 07:03 HITS.47962010._000579.pool.root.1
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas      1053 Jan 10 07:04 memory_monitor_summary.json
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas   1516240 Jan 10 07:04 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas   1740343 Jan 10 07:04 log.47962010._000579.job.log.tgz.1
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas      8607 Jan 10 07:04 heartbeat.json
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas        95 Jan 10 07:05 pilot_heartbeat.json
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas      4824 Jan 10 07:05 pilotlog.txt
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas   5028138 Jan 10 07:05 log.47962010._000579.job.log.1
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas       353 Jan 10 07:05 output.list
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 07:05 boinc_mmap_file
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas       620 Jan 10 07:05 runtime_log
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas   6789120 Jan 10 07:05 result.tar.gz
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 07:05 runtime_log.err
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas       661 Jan 10 07:05 N09LDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXNhKDmnFJxhm.diag
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas        29 Jan 10 07:05 wrapper_checkpoint.txt
[2026-01-10 07:05:38] -rw-r--r--. 1 boincer umatlas     20997 Jan 10 07:05 stderr.txt
[2026-01-10 07:05:38] HITS file was successfully produced:
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas 402874436 Jan 10 07:03 shared/HITS.pool.root.1
[2026-01-10 07:05:38]  *** Contents of shared directory: ***
[2026-01-10 07:05:38] total 786864
[2026-01-10 07:05:38] -rw-r--r--. 2 boincer umatlas 395458336 Jan  9 19:57 ATLAS.root_0
[2026-01-10 07:05:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:57 start_atlas.sh
[2026-01-10 07:05:38] -rw-r--r--. 2 boincer umatlas    592610 Jan  9 19:57 input.tar.gz
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas 402874436 Jan 10 07:03 HITS.pool.root.1
[2026-01-10 07:05:38] -rw-------. 1 boincer umatlas   6789120 Jan 10 07:05 result.tar.gz
07:05:40 (4066566): run_atlas exited; CPU time 132095.355811
07:05:40 (4066566): called boinc_finish(0)

</stderr_txt>
]]>

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