Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:42:54 (1982314): wrapper (7.7.26015): starting
13:42:54 (1982314): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 13:42:54] Arguments: --nthreads 12
[2026-01-09 13:42:54] Threads: 12
[2026-01-09 13:42:54] Checking for CVMFS
[2026-01-09 13:42:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:42:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:42:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:42:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:42:54] 2.11.5.0 4038285 92204 214380 154957 2 249 45088608 45568000 13346 130560 0 756232660 99.796 453682818 18143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 13:42:54] CVMFS is ok
[2026-01-09 13:42:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:42:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:42:54] Further information can be found at the LHC@home message board.
[2026-01-09 13:42:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:42:54] Checking for apptainer binary...
[2026-01-09 13:42:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:42:54] Running /usr/bin/apptainer --version
[2026-01-09 13:42:55] apptainer version 1.4.1-1.el9
[2026-01-09 13:42:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:42:55] wns0061.triumf.lcg
[2026-01-09 13:42:55] apptainer works
[2026-01-09 13:42:55] Set ATHENA_PROC_NUMBER=12
[2026-01-09 13:42:55] Set ATHENA_CORE_NUMBER=12
[2026-01-09 13:42:55] Starting ATLAS job with PandaID=6964552654
[2026-01-09 13:42:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:46:09]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | found no stored workdir sizes
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | WARNING  | wrong length of table data, x=[1767995009.0], y=[1140.0] (must be same and length>=4)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | ..............................
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | . Timing measurements:
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | . get job = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . initial setup = 2 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . payload setup = 5 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . stage-in = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . payload execution = 17 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . stage-out = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . log creation = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | ..............................
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964552654/pilotlog.txt
[2026-01-09 13:46:09] 2026-01-09 21:45:46,049 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 13:46:09] - Log from pilotlog.txt -
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | found no stored workdir sizes
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | WARNING  | wrong length of table data, x=[1767995009.0], y=[1140.0] (must be same and length>=4)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | ..............................
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | . Timing measurements:
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | . get job = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . initial setup = 2 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . payload setup = 5 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . stage-in = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . payload execution = 17 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . stage-out = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . log creation = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | ..............................
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964552654/pilotlog.txt
[2026-01-09 13:46:09] 2026-01-09 21:45:46,050 | WARNING  | 
[2026-01-09 13:46:09] [begin log extracts]
[2026-01-09 13:46:09] - Log from pilotlog.txt -
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | WARNING  | found no stored workdir sizes
[2026-01-09 13:46:09] 2026-01-09 21:45:46,037 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | WARNING  | wrong length of table data, x=[1767995009.0], y=[1140.0] (must be same and length>=4)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | ..............................
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | . Timing measurements:
[2026-01-09 13:46:09] 2026-01-09 21:45:46,038 | INFO     | . get job = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . initial setup = 2 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . payload setup = 5 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . stage-in = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . payload execution = 17 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . stage-out = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | . log creation = 0 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | ..............................
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 13:46:09] 2026-01-09 21:45:46,039 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964552654/pilotlog.txt
[2026-01-09 13:46:09] [end log extracts]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,050 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,051 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 13:46:09] 2026-01-09 21:45:46,291 | INFO     | time since job start (162s) is within the limit (349056.0s)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | 
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | job summary report
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | --------------------------------------------------
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | PanDA job id: 6964552654
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | task id: 47898826
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 13:43:36,812 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | pilot state: failed 
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | transexitcode: 65
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | exeerrorcode: 65
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | exitcode: 65
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,450 | INFO     | cpuconsumptiontime: 17 s
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | nevents: 0
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | neventsw: 0
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | pid: 1992481
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | pgrp: 1992481
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | corecount: 12
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | event service: False
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | sizes: {0: 2283861, 4: 2284123, 11: 2284151, 26: 2307570, 27: 2311862, 29: 2311890, 148: 2312184}
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | --------------------------------------------------
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | 
[2026-01-09 13:46:09] 2026-01-09 21:45:46,451 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 13:46:09] 2026-01-09 21:45:46,465 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,467 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:46:09] 2026-01-09 21:45:46,467 | INFO     | job 6964552654 has completed (purged errors)
[2026-01-09 13:46:09] 2026-01-09 21:45:46,467 | INFO     | overall cleanup function is called
[2026-01-09 13:46:09] 2026-01-09 21:45:47,473 | INFO     | --- collectZombieJob: --- 10, [1992481]
[2026-01-09 13:46:09] 2026-01-09 21:45:47,473 | INFO     | zombie collector waiting for pid 1992481
[2026-01-09 13:46:09] 2026-01-09 21:45:47,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:46:09] 2026-01-09 21:45:47,473 | INFO     | collected zombie processes
[2026-01-09 13:46:09] 2026-01-09 21:45:47,473 | INFO     | will attempt to kill all subprocesses of pid=1992481
[2026-01-09 13:46:09] 2026-01-09 21:45:47,619 | INFO     | process IDs to be killed: [1992481] (in reverse order)
[2026-01-09 13:46:09] 2026-01-09 21:45:47,676 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:46:09] 2026-01-09 21:45:47,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:46:09] 2026-01-09 21:45:47,683 | INFO     | did not find any defunct processes belonging to 1992481
[2026-01-09 13:46:09] 2026-01-09 21:45:47,690 | INFO     | did not find any defunct processes belonging to 1992481
[2026-01-09 13:46:09] 2026-01-09 21:45:47,690 | INFO     | ready for new job
[2026-01-09 13:46:09] 2026-01-09 21:45:47,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:46:09] 2026-01-09 21:45:47,691 | INFO     | ***************************************
[2026-01-09 13:46:09] 2026-01-09 21:45:47,692 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:46:09] 2026-01-09 21:45:47,692 | INFO     | ***************************************
[2026-01-09 13:46:09] 2026-01-09 21:45:47,692 | INFO     | 
[2026-01-09 13:46:09] 2026-01-09 21:45:47,694 | INFO     | architecture information:
[2026-01-09 13:46:09] 2026-01-09 21:45:47,694 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:46:09] 2026-01-09 21:45:47,705 | INFO     | cat /etc/os-release:
[2026-01-09 13:46:09] NAME="CentOS Linux"
[2026-01-09 13:46:09] VERSION="7 (Core)"
[2026-01-09 13:46:09] ID="centos"
[2026-01-09 13:46:09] ID_LIKE="rhel fedora"
[2026-01-09 13:46:09] VERSION_ID="7"
[2026-01-09 13:46:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:46:09] ANSI_COLOR="0;31"
[2026-01-09 13:46:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:46:09] HOME_URL="https://www.centos.org/"
[2026-01-09 13:46:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:46:09] 
[2026-01-09 13:46:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:46:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:46:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:46:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:46:09] 
[2026-01-09 13:46:09] 2026-01-09 21:45:47,705 | INFO     | ***************************************
[2026-01-09 13:46:09] 2026-01-09 21:45:48,208 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 13:46:09] 2026-01-09 21:45:48,220 | INFO     | sufficient remaining disk space (2153376645120 B)
[2026-01-09 13:46:09] 2026-01-09 21:45:48,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:46:09] 2026-01-09 21:45:48,220 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:46:09] 2026-01-09 21:45:48,220 | INFO     | update_server=False
[2026-01-09 13:46:09] 2026-01-09 21:45:48,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:46:09] 2026-01-09 21:45:48,220 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 13:46:09] 2026-01-09 21:45:48,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:46:09] 2026-01-09 21:45:48,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:46:09] 2026-01-09 21:45:48,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:46:09] 2026-01-09 21:45:48,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:46:09] 2026-01-09 21:45:48,221 | INFO     | aborting loop
[2026-01-09 13:46:09] 2026-01-09 21:45:48,331 | INFO     | all data control threads have been joined
[2026-01-09 13:46:09] 2026-01-09 21:45:48,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:46:09] 2026-01-09 21:45:49,225 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:49,226 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:49,255 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:49,326 | INFO     | all job control threads have been joined
[2026-01-09 13:46:09] 2026-01-09 21:45:49,336 | INFO     | [data] control thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:49,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:49,444 | INFO     | all payload control threads have been joined
[2026-01-09 13:46:09] 2026-01-09 21:45:49,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:46:09] 2026-01-09 21:45:49,797 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:49,893 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,073 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,331 | INFO     | [job] control thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,445 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,449 | INFO     | [payload] control thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,530 | INFO     | [job] validate thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,541 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:50,643 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:51,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:46:09] 2026-01-09 21:45:52,139 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:45:53,711 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:46:09] 2026-01-09 21:46:03,802 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:46:09] 2026-01-09 21:46:04,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342922319680)>', '<ExcThread(monitor, started 140342376507136)>']
[2026-01-09 13:46:09] 2026-01-09 21:46:04,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:46:09] 2026-01-09 21:46:04,314 | INFO     | [monitor] control thread has ended
[2026-01-09 13:46:09] 2026-01-09 21:46:09,082 | INFO     | all workflow threads have been joined
[2026-01-09 13:46:09] 2026-01-09 21:46:09,082 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:46:09] 2026-01-09 21:46:09,082 | INFO     | traces error code: 0
[2026-01-09 13:46:09] 2026-01-09 21:46:09,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:46:09] 2026-01-09 21:46:09,205 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:46:09] 2026-01-09 21:46:09,207 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:46:09] 2026-01-09 21:46:09,209 [wrapper] pilotpid: 1985953
[2026-01-09 13:46:09] 2026-01-09 21:46:09,211 [wrapper] Pilot exit status: 0
[2026-01-09 13:46:09] 2026-01-09 21:46:09,219 [wrapper] pandaids: 6964552654
[2026-01-09 13:46:09] 2026-01-09 21:46:09,255 [wrapper] cleanup supervisor_pilot 1985959 1985954
[2026-01-09 13:46:09] 2026-01-09 21:46:09,257 [wrapper] Test setup, not cleaning
[2026-01-09 13:46:09] 2026-01-09 21:46:09,260 [wrapper] apfmon messages muted
[2026-01-09 13:46:09] 2026-01-09 21:46:09,262 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:46:09] 2026-01-09 21:46:09,264 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:46:09]  *** Error codes and diagnostics ***
[2026-01-09 13:46:09]     "exeErrorCode": 65,
[2026-01-09 13:46:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 13:46:09]     "pilotErrorCode": 1305,
[2026-01-09 13:46:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 13:46:09]  *** Listing of results directory ***
[2026-01-09 13:46:09] total 223268
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc    579449 Jan  9 07:55 pilot3.tar.gz
[2026-01-09 13:46:09] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:17 queuedata.json
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc       100 Jan  9 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:46:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 13:42 run_atlas
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc       105 Jan  9 13:42 job.xml
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc      6595 Jan  9 13:42 init_data.xml
[2026-01-09 13:46:09] -rw-r--r--. 2 boinc boinc 224503923 Jan  9 13:42 EVNT.47898824._000339.pool.root.1
[2026-01-09 13:46:09] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:42 start_atlas.sh
[2026-01-09 13:46:09] drwxrwx--x. 2 boinc boinc      4096 Jan  9 13:42 shared
[2026-01-09 13:46:09] -rw-r--r--. 2 boinc boinc    592401 Jan  9 13:42 input.tar.gz
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc         0 Jan  9 13:42 boinc_lockfile
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc      2515 Jan  9 13:42 pandaJob.out
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc    989398 Jan  9 13:43 agis_schedconf.cvmfs.json
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc   1516240 Jan  9 13:43 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:46:09] drwx------. 5 boinc boinc      4096 Jan  9 13:43 pilot3
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc       522 Jan  9 13:43 boinc_task_state.xml
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc       984 Jan  9 13:43 memory_monitor_summary.json
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc     20635 Jan  9 13:43 log.47898826._040120.job.log.tgz.1
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc        95 Jan  9 13:45 pilot_heartbeat.json
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc      8423 Jan  9 13:45 heartbeat.json
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc        22 Jan  9 13:46 wrapper_checkpoint.txt
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc      4551 Jan  9 13:46 pilotlog.txt
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc     82301 Jan  9 13:46 log.47898826._040120.job.log.1
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:46 boinc_mmap_file
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc       188 Jan  9 13:46 output.list
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:46 runtime_log
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc    122880 Jan  9 13:46 result.tar.gz
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc      8636 Jan  9 13:46 runtime_log.err
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc       647 Jan  9 13:46 p6uKDmFMUy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmogmKDmBcSPEm.diag
[2026-01-09 13:46:09] -rw-r--r--. 1 boinc boinc     21581 Jan  9 13:46 stderr.txt
[2026-01-09 13:46:09] No HITS result produced
[2026-01-09 13:46:09]  *** Contents of shared directory: ***
[2026-01-09 13:46:09] total 219964
[2026-01-09 13:46:09] -rw-r--r--. 2 boinc boinc 224503923 Jan  9 13:42 ATLAS.root_0
[2026-01-09 13:46:09] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:42 start_atlas.sh
[2026-01-09 13:46:09] -rw-r--r--. 2 boinc boinc    592401 Jan  9 13:42 input.tar.gz
[2026-01-09 13:46:09] -rw-------. 1 boinc boinc    122880 Jan  9 13:46 result.tar.gz
13:46:11 (1982314): run_atlas exited; CPU time 21.327561
13:46:11 (1982314): called boinc_finish(0)

</stderr_txt>
]]>

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