Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:50 (1236947): wrapper (7.7.26015): starting
18:43:50 (1236947): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:43:50] Arguments: --nthreads 8
[2026-01-09 18:43:50] Threads: 8
[2026-01-09 18:43:50] Checking for CVMFS
[2026-01-09 18:43:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:43:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:43:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:43:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:43:52] 2.13.3.0 12537 94083 391180 154961 0 344 34407336 40960000 14743 16776704 43 378015294 99.604 394425919 37479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:43:52] CVMFS is ok
[2026-01-09 18:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:43:53] Further information can be found at the LHC@home message board.
[2026-01-09 18:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:43:53] Checking for apptainer binary...
[2026-01-09 18:43:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:43:53] Running /usr/bin/apptainer --version
[2026-01-09 18:43:53] apptainer version 1.4.5-2.el9
[2026-01-09 18:43:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:43:53] c7-11-14.aglt2.org
[2026-01-09 18:43:53] apptainer works
[2026-01-09 18:43:54] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:43:54] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:43:54] Starting ATLAS job with PandaID=6963378788
[2026-01-09 18:43:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:52:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:52:59] 2026-01-11 01:52:16,798 | INFO     | monitor loop #6207: job 0:6963378788 is in state 'finished'
[2026-01-10 20:52:59] 2026-01-11 01:52:16,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:52:59] 2026-01-11 01:52:17,673 | INFO     | time since job start (94025s) is within the limit (349056.0s)
[2026-01-10 20:52:59] 2026-01-11 01:52:19,310 | INFO     | monitor loop #6208: job 0:6963378788 is in state 'finished'
[2026-01-10 20:52:59] 2026-01-11 01:52:19,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:52:59] 2026-01-11 01:52:19,682 | INFO     | time since job start (94027s) is within the limit (349056.0s)
[2026-01-10 20:52:59] 2026-01-11 01:52:21,689 | INFO     | time since job start (94029s) is within the limit (349056.0s)
[2026-01-10 20:52:59] 2026-01-11 01:52:21,824 | INFO     | monitor loop #6209: job 0:6963378788 is in state 'finished'
[2026-01-10 20:52:59] 2026-01-11 01:52:21,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,087 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 20:52:59] 2026-01-11 01:52:22,095 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3289.721812499999
[2026-01-10 20:52:59] 2026-01-11 01:52:22,105 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963378788/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,106 | INFO     | extracted standard info from prmon json
[2026-01-10 20:52:59] 2026-01-11 01:52:22,106 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:52:59] 2026-01-11 01:52:22,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:52:59] 2026-01-11 01:52:22,126 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:52:59] 2026-01-11 01:52:22,128 | INFO     | sum of square deviations: 1130300553626.6763
[2026-01-10 20:52:59] 2026-01-11 01:52:22,269 | INFO     | sum of deviations: 4314766081386.5825
[2026-01-10 20:52:59] 2026-01-11 01:52:22,269 | INFO     | mean x: 1768049364.4931774
[2026-01-10 20:52:59] 2026-01-11 01:52:22,269 | INFO     | mean y: 2891873.245614035
[2026-01-10 20:52:59] 2026-01-11 01:52:22,269 | INFO     | intersect: -6746392114.67671
[2026-01-10 20:52:59] 2026-01-11 01:52:22,270 | INFO     | chi2: 15.114196325797428
[2026-01-10 20:52:59] 2026-01-11 01:52:22,284 | INFO     | sum of square deviations: 1119320425362.9946
[2026-01-10 20:52:59] 2026-01-11 01:52:22,470 | INFO     | sum of deviations: 4839267268828.085
[2026-01-10 20:52:59] 2026-01-11 01:52:22,470 | INFO     | mean x: 1768049211.9980443
[2026-01-10 20:52:59] 2026-01-11 01:52:22,470 | INFO     | mean y: 2899156.029986962
[2026-01-10 20:52:59] 2026-01-11 01:52:22,470 | INFO     | intersect: -7641080608.320958
[2026-01-10 20:52:59] 2026-01-11 01:52:22,476 | INFO     | chi2: 11.80966393762656
[2026-01-10 20:52:59] 2026-01-11 01:52:22,476 | INFO     | current chi2=11.80966393762656 (change=21.86376514463147 %)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,476 | INFO     | right removable region: 1533
[2026-01-10 20:52:59] 2026-01-11 01:52:22,477 | INFO     | sum of square deviations: 1119319023582.9946
[2026-01-10 20:52:59] 2026-01-11 01:52:22,568 | INFO     | sum of deviations: 3708835092346.264
[2026-01-10 20:52:59] 2026-01-11 01:52:22,568 | INFO     | mean x: 1768049516.9980443
[2026-01-10 20:52:59] 2026-01-11 01:52:22,568 | INFO     | mean y: 2900286.754237288
[2026-01-10 20:52:59] 2026-01-11 01:52:22,568 | INFO     | intersect: -5855486782.070556
[2026-01-10 20:52:59] 2026-01-11 01:52:22,569 | INFO     | chi2: 11.206842784484166
[2026-01-10 20:52:59] 2026-01-11 01:52:22,569 | INFO     | current chi2=11.206842784484166 (change=25.852208460757232 %)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,575 | INFO     | sum of square deviations: 1108409124076.2493
[2026-01-10 20:52:59] 2026-01-11 01:52:22,650 | INFO     | sum of deviations: 3497207174859.8843
[2026-01-10 20:52:59] 2026-01-11 01:52:22,654 | INFO     | mean x: 1768049669.500981
[2026-01-10 20:52:59] 2026-01-11 01:52:22,654 | INFO     | mean y: 2903241.7390451278
[2026-01-10 20:52:59] 2026-01-11 01:52:22,654 | INFO     | intersect: -5575574826.8537245
[2026-01-10 20:52:59] 2026-01-11 01:52:22,655 | INFO     | chi2: 10.636356421070047
[2026-01-10 20:52:59] 2026-01-11 01:52:22,655 | INFO     | current chi2=10.636356421070047 (change=5.090518127049622 %)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,655 | INFO     | left removable region: 20
[2026-01-10 20:52:59] 2026-01-11 01:52:22,657 | INFO     | sum of square deviations: 1073975924702.0916
[2026-01-10 20:52:59] 2026-01-11 01:52:22,741 | INFO     | sum of deviations: 3988727884430.6313
[2026-01-10 20:52:59] 2026-01-11 01:52:22,741 | INFO     | mean x: 1768049791.5102446
[2026-01-10 20:52:59] 2026-01-11 01:52:22,741 | INFO     | mean y: 2914658.733641771
[2026-01-10 20:52:59] 2026-01-11 01:52:22,741 | INFO     | intersect: -6563591481.909031
[2026-01-10 20:52:59] 2026-01-11 01:52:22,742 | INFO     | chi2: 6.355398792807769
[2026-01-10 20:52:59] 2026-01-11 01:52:22,742 | INFO     | current memory leak: 3.71 B/s (using 1513 data points, chi2=6.36)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | could have reported an average CPU frequency of 3291 MHz (55 samples)
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | ..............................
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . Timing measurements:
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . get job = 1 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . initial setup = 10 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . payload setup = 50 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . stage-in = 0 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . payload execution = 93873 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . stage-out = 7 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | . log creation = 3 s
[2026-01-10 20:52:59] 2026-01-11 01:52:22,744 | INFO     | ..............................
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | 
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | job summary report
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | --------------------------------------------------
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | PanDA job id: 6963378788
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | task id: 47962010
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | errors: (none)
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | pilot state: finished 
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | transexitcode: 0
[2026-01-10 20:52:59] 2026-01-11 01:52:23,358 | INFO     | exeerrorcode: 0
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | exeerrordiag: 
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | exitcode: 0
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | exitmsg: OK
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | cpuconsumptiontime: 206395 s
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | nevents: 900
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | neventsw: 0
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | pid: 1251933
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | pgrp: 1251933
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | corecount: 8
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | event service: False
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | sizes: {0: 2283794, 1: 2284479, 2: 2284678, 13: 2284678, 24: 2284734, 35: 2284762, 38: 2285180, 46: 2285208, 93927: 2354770, 93935: 2363820, 93959: 2364010}
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | --------------------------------------------------
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | 
[2026-01-10 20:52:59] 2026-01-11 01:52:23,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 20:52:59] 2026-01-11 01:52:23,483 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,485 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:52:59] 2026-01-11 01:52:23,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,485 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:52:59] 2026-01-11 01:52:23,485 | INFO     | job 6963378788 has completed (purged errors)
[2026-01-10 20:52:59] 2026-01-11 01:52:23,485 | INFO     | overall cleanup function is called
[2026-01-10 20:52:59] 2026-01-11 01:52:24,515 | INFO     | --- collectZombieJob: --- 10, [1251933]
[2026-01-10 20:52:59] 2026-01-11 01:52:24,521 | INFO     | zombie collector waiting for pid 1251933
[2026-01-10 20:52:59] 2026-01-11 01:52:24,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:52:59] 2026-01-11 01:52:24,521 | INFO     | collected zombie processes
[2026-01-10 20:52:59] 2026-01-11 01:52:24,521 | INFO     | will attempt to kill all subprocesses of pid=1251933
[2026-01-10 20:52:59] 2026-01-11 01:52:25,100 | INFO     | process IDs to be killed: [1251933] (in reverse order)
[2026-01-10 20:52:59] 2026-01-11 01:52:25,716 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:52:59] 2026-01-11 01:52:25,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:52:59] 2026-01-11 01:52:25,745 | INFO     | did not find any defunct processes belonging to 1251933
[2026-01-10 20:52:59] 2026-01-11 01:52:25,770 | INFO     | did not find any defunct processes belonging to 1251933
[2026-01-10 20:52:59] 2026-01-11 01:52:25,775 | INFO     | ready for new job
[2026-01-10 20:52:59] 2026-01-11 01:52:25,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:52:59] 2026-01-11 01:52:25,786 | INFO     | ***************************************
[2026-01-10 20:52:59] 2026-01-11 01:52:25,786 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:52:59] 2026-01-11 01:52:25,786 | INFO     | ***************************************
[2026-01-10 20:52:59] 2026-01-11 01:52:25,786 | INFO     | 
[2026-01-10 20:52:59] 2026-01-11 01:52:25,794 | INFO     | architecture information:
[2026-01-10 20:52:59] 2026-01-11 01:52:25,794 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:52:59] 2026-01-11 01:52:26,019 | INFO     | cat /etc/os-release:
[2026-01-10 20:52:59] NAME="CentOS Linux"
[2026-01-10 20:52:59] VERSION="7 (Core)"
[2026-01-10 20:52:59] ID="centos"
[2026-01-10 20:52:59] ID_LIKE="rhel fedora"
[2026-01-10 20:52:59] VERSION_ID="7"
[2026-01-10 20:52:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:52:59] ANSI_COLOR="0;31"
[2026-01-10 20:52:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:52:59] HOME_URL="https://www.centos.org/"
[2026-01-10 20:52:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:52:59] 
[2026-01-10 20:52:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:52:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:52:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:52:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:52:59] 
[2026-01-10 20:52:59] 2026-01-11 01:52:26,019 | INFO     | ***************************************
[2026-01-10 20:52:59] 2026-01-11 01:52:26,523 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 20:52:59] 2026-01-11 01:52:26,706 | INFO     | sufficient remaining disk space (84367376384 B)
[2026-01-10 20:52:59] 2026-01-11 01:52:26,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:52:59] 2026-01-11 01:52:26,707 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:52:59] 2026-01-11 01:52:26,707 | INFO     | update_server=False
[2026-01-10 20:52:59] 2026-01-11 01:52:26,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:52:59] 2026-01-11 01:52:26,847 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:52:59] 2026-01-11 01:52:26,847 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:52:59] 2026-01-11 01:52:26,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:52:59] 2026-01-11 01:52:26,847 | INFO     | will abort loop
[2026-01-10 20:52:59] 2026-01-11 01:52:27,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:52:59] 2026-01-11 01:52:27,070 | INFO     | all payload control threads have been joined
[2026-01-10 20:52:59] 2026-01-11 01:52:27,580 | INFO     | all data control threads have been joined
[2026-01-10 20:52:59] 2026-01-11 01:52:27,714 | INFO     | [job] validate thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:27,714 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:27,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:52:59] 2026-01-11 01:52:27,789 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:27,870 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:27,878 | INFO     | all job control threads have been joined
[2026-01-10 20:52:59] 2026-01-11 01:52:27,890 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:27,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:52:59] 2026-01-11 01:52:28,076 | INFO     | [payload] control thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,245 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,388 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,507 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,585 | INFO     | [data] control thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,743 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,900 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:28,942 | INFO     | [job] control thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:29,010 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:31,746 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:52:59] 2026-01-11 01:52:51,588 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:52:59] 2026-01-11 01:52:52,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394857654080)>', '<ExcThread(monitor, started 140394576709376)>']
[2026-01-10 20:52:59] 2026-01-11 01:52:55,624 | INFO     | PID=1242550 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:52:59] 2026-01-11 01:52:55,626 | INFO     | .. there are 11 such processes running
[2026-01-10 20:52:59] 2026-01-11 01:52:55,626 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:52:59] 2026-01-11 01:52:55,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:52:59] 2026-01-11 01:52:55,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:52:59] 2026-01-11 01:52:55,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:52:59] 2026-01-11 01:52:55,626 | INFO     | [monitor] control thread has ended
[2026-01-10 20:52:59] 2026-01-11 01:52:57,623 | INFO     | all workflow threads have been joined
[2026-01-10 20:52:59] 2026-01-11 01:52:57,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:52:59] 2026-01-11 01:52:57,623 | INFO     | traces error code: 0
[2026-01-10 20:52:59] 2026-01-11 01:52:57,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:52:59] 2026-01-11 01:52:58,009 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:52:59] 2026-01-11 01:52:58,035 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:52:59] 2026-01-11 01:52:58,053 [wrapper] pilotpid: 1242550
[2026-01-10 20:52:59] 2026-01-11 01:52:58,099 [wrapper] Pilot exit status: 0
[2026-01-10 20:52:59] 2026-01-11 01:52:58,222 [wrapper] pandaids: 6963378788
[2026-01-10 20:52:59] 2026-01-11 01:52:58,648 [wrapper] cleanup supervisor_pilot  246580 1242551
[2026-01-10 20:52:59] 2026-01-11 01:52:58,690 [wrapper] Test setup, not cleaning
[2026-01-10 20:52:59] 2026-01-11 01:52:58,724 [wrapper] apfmon messages muted
[2026-01-10 20:52:59] 2026-01-11 01:52:58,758 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:52:59] 2026-01-11 01:52:58,804 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:52:59]  *** Error codes and diagnostics ***
[2026-01-10 20:52:59]     "exeErrorCode": 0,
[2026-01-10 20:52:59]     "exeErrorDiag": "",
[2026-01-10 20:52:59]     "pilotErrorCode": 0,
[2026-01-10 20:52:59]     "pilotErrorDiag": "",
[2026-01-10 20:52:59]  *** Listing of results directory ***
[2026-01-10 20:52:59] total 1187148
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 20:52:59] -rwx------. 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:52:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:43 run_atlas
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:43 job.xml
[2026-01-10 20:52:59] -rw-r--r--. 2 boincer umatlas 390748527 Jan  9 18:43 EVNT.47962006._000103.pool.root.1
[2026-01-10 20:52:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:43 start_atlas.sh
[2026-01-10 20:52:59] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:43 shared
[2026-01-10 20:52:59] -rw-r--r--. 2 boincer umatlas    592614 Jan  9 18:43 input.tar.gz
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:43 boinc_lockfile
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 18:43 pandaJob.out
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas        57 Jan  9 18:43 setup.sh.local
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas    989374 Jan  9 18:45 agis_schedconf.cvmfs.json
[2026-01-10 20:52:59] drwx------. 5 boincer umatlas      4096 Jan  9 18:45 pilot3
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas       533 Jan 10 20:14 boinc_task_state.xml
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas      6903 Jan 10 20:48 init_data.xml
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas 790857393 Jan 10 20:49 HITS.47962010._001269.pool.root.1
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas      1043 Jan 10 20:51 memory_monitor_summary.json
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 20:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas   2531995 Jan 10 20:51 log.47962010._001269.job.log.tgz.1
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas        95 Jan 10 20:51 pilot_heartbeat.json
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas      8574 Jan 10 20:52 heartbeat.json
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:52 boinc_mmap_file
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas        29 Jan 10 20:52 wrapper_checkpoint.txt
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas      5010 Jan 10 20:52 pilotlog.txt
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas  12522356 Jan 10 20:52 log.47962010._001269.job.log.1
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas       353 Jan 10 20:52 output.list
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:52 runtime_log
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas  15073280 Jan 10 20:52 result.tar.gz
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas       661 Jan 10 20:52 suENDmGtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDKhKDm7Nx3Qm.diag
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 20:52 runtime_log.err
[2026-01-10 20:52:59] -rw-r--r--. 1 boincer umatlas     21238 Jan 10 20:52 stderr.txt
[2026-01-10 20:52:59] HITS file was successfully produced:
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas 790857393 Jan 10 20:49 shared/HITS.pool.root.1
[2026-01-10 20:52:59]  *** Contents of shared directory: ***
[2026-01-10 20:52:59] total 1169240
[2026-01-10 20:52:59] -rw-r--r--. 2 boincer umatlas 390748527 Jan  9 18:43 ATLAS.root_0
[2026-01-10 20:52:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:43 start_atlas.sh
[2026-01-10 20:52:59] -rw-r--r--. 2 boincer umatlas    592614 Jan  9 18:43 input.tar.gz
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas 790857393 Jan 10 20:49 HITS.pool.root.1
[2026-01-10 20:52:59] -rw-------. 1 boincer umatlas  15073280 Jan 10 20:52 result.tar.gz
20:53:01 (1236947): run_atlas exited; CPU time 206586.076548
20:53:01 (1236947): called boinc_finish(0)

</stderr_txt>
]]>

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