Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:17:53 (1084822): wrapper (7.7.26015): starting
18:17:53 (1084822): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 18:17:53] Arguments: --nthreads 4
[2026-01-10 18:17:53] Threads: 4
[2026-01-10 18:17:53] Checking for CVMFS
[2026-01-10 18:17:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:17:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:17:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:17:54] 2.9.2.0 99878 3775 96836 154987 0 56 36537743 36864001 0 130560 0 2572213 99.989 142961 3362 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 18:17:54] CVMFS is ok
[2026-01-10 18:17:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:17:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:17:54] Further information can be found at the LHC@home message board.
[2026-01-10 18:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:17:54] Checking for apptainer binary...
[2026-01-10 18:17:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:17:54] Running /usr/bin/apptainer --version
[2026-01-10 18:17:54] apptainer version 1.4.1-1.1
[2026-01-10 18:17:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:17:54] thA315a
[2026-01-10 18:17:54] apptainer works
[2026-01-10 18:17:54] Set ATHENA_PROC_NUMBER=4
[2026-01-10 18:17:54] Set ATHENA_CORE_NUMBER=4
[2026-01-10 18:17:54] Starting ATLAS job with PandaID=6963378816
[2026-01-10 18:17:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:25:42]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:25:42] 2026-01-11 00:24:46,770 | INFO     | cat /etc/os-release:
[2026-01-11 01:25:42] NAME="CentOS Linux"
[2026-01-11 01:25:42] VERSION="7 (Core)"
[2026-01-11 01:25:42] ID="centos"
[2026-01-11 01:25:42] ID_LIKE="rhel fedora"
[2026-01-11 01:25:42] VERSION_ID="7"
[2026-01-11 01:25:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:25:42] ANSI_COLOR="0;31"
[2026-01-11 01:25:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:25:42] HOME_URL="https://www.centos.org/"
[2026-01-11 01:25:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:25:42] 
[2026-01-11 01:25:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:25:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:25:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:25:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:25:42] 
[2026-01-11 01:25:42] 2026-01-11 00:24:46,770 | INFO     | ***************************************
[2026-01-11 01:25:42] 2026-01-11 00:24:47,274 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-11 01:25:42] 2026-01-11 00:24:47,291 | INFO     | sufficient remaining disk space (222951374848 B)
[2026-01-11 01:25:42] 2026-01-11 00:24:47,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:25:42] 2026-01-11 00:24:47,291 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:25:42] 2026-01-11 00:24:47,291 | INFO     | update_server=False
[2026-01-11 01:25:42] 2026-01-11 00:24:47,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:25:42] 2026-01-11 00:24:47,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:25:42] 2026-01-11 00:24:47,292 | INFO     | aborting loop
[2026-01-11 01:25:42] 2026-01-11 00:24:47,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:25:42] 2026-01-11 00:24:47,435 | INFO     | all payload control threads have been joined
[2026-01-11 01:25:42] 2026-01-11 00:24:47,555 | INFO     | all data control threads have been joined
[2026-01-11 01:25:42] 2026-01-11 00:24:47,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:25:42] 2026-01-11 00:24:48,297 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,297 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,297 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,441 | INFO     | [payload] control thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,443 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,448 | INFO     | all job control threads have been joined
[2026-01-11 01:25:42] 2026-01-11 00:24:48,515 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,561 | INFO     | [data] control thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:48,832 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:49,173 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:49,448 | INFO     | [job] validate thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:49,454 | INFO     | [job] control thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:49,562 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:49,573 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:49,688 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:50,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:25:42] 2026-01-11 00:24:54,222 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:24:57,443 | INFO     | job.realtimelogging is not enabled
[2026-01-11 01:25:42] 2026-01-11 00:24:58,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:25:42] 2026-01-11 00:25:16,861 | INFO     | PID=1088621 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 01:25:42] 2026-01-11 00:25:16,862 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:25:42] 2026-01-11 00:25:16,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:25:42] 2026-01-11 00:25:16,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:25:42] 2026-01-11 00:25:36,187 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:25:42] 2026-01-11 00:25:37,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717064542016)>', '<ExcThread(monitor, started 140716256773888)>']
[2026-01-11 01:25:42] 2026-01-11 00:25:37,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:25:42] 2026-01-11 00:25:37,973 | INFO     | [monitor] control thread has ended
[2026-01-11 01:25:42] 2026-01-11 00:25:42,129 | INFO     | all workflow threads have been joined
[2026-01-11 01:25:42] 2026-01-11 00:25:42,129 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:25:42] 2026-01-11 00:25:42,130 | INFO     | traces error code: 0
[2026-01-11 01:25:42] 2026-01-11 00:25:42,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:25:42] 2026-01-11 00:25:42,197 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:25:42] 2026-01-11 00:25:42,201 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:25:42] 2026-01-11 00:25:42,205 [wrapper] pilotpid: 1088621
[2026-01-11 01:25:42] 2026-01-11 00:25:42,208 [wrapper] Pilot exit status: 0
[2026-01-11 01:25:42] 2026-01-11 00:25:42,219 [wrapper] pandaids: 6963378816
[2026-01-11 01:25:42] 2026-01-11 00:25:42,240 [wrapper] cleanup supervisor_pilot 1139139 1088622
[2026-01-11 01:25:42] 2026-01-11 00:25:42,244 [wrapper] Test setup, not cleaning
[2026-01-11 01:25:42] 2026-01-11 00:25:42,248 [wrapper] apfmon messages muted
[2026-01-11 01:25:42] 2026-01-11 00:25:42,251 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:25:42] 2026-01-11 00:25:42,254 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:25:42]  *** Error codes and diagnostics ***
[2026-01-11 01:25:42]     "exeErrorCode": 0,
[2026-01-11 01:25:42]     "exeErrorDiag": "",
[2026-01-11 01:25:42]     "pilotErrorCode": 0,
[2026-01-11 01:25:42]     "pilotErrorDiag": "",
[2026-01-11 01:25:42]  *** Listing of results directory ***
[2026-01-11 01:25:42] total 1158632
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-11 01:25:42] -rwx------ 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc       100 Jan 10 18:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:25:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 18:17 run_atlas
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc       105 Jan 10 18:17 job.xml
[2026-01-11 01:25:42] -rw-r--r-- 2 boinc boinc 391949667 Jan 10 18:17 EVNT.47962006._000105.pool.root.1
[2026-01-11 01:25:42] -rw-r--r-- 2 boinc boinc    592615 Jan 10 18:17 input.tar.gz
[2026-01-11 01:25:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 18:17 start_atlas.sh
[2026-01-11 01:25:42] drwxrwx--x 2 boinc boinc      4096 Jan 10 18:17 shared
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc         0 Jan 10 18:17 boinc_setup_complete
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc      6371 Jan 10 18:17 init_data.xml
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc         0 Jan 10 18:17 boinc_lockfile
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc      2892 Jan 10 18:17 pandaJob.out
[2026-01-11 01:25:42] -rw------- 1 boinc boinc    989548 Jan 10 18:18 agis_schedconf.cvmfs.json
[2026-01-11 01:25:42] drwx------ 5 boinc boinc      4096 Jan 10 18:18 pilot3
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc       532 Jan 11 01:20 boinc_task_state.xml
[2026-01-11 01:25:42] -rw------- 1 boinc boinc 780855384 Jan 11 01:24 HITS.47962010._001297.pool.root.1
[2026-01-11 01:25:42] -rw------- 1 boinc boinc      1025 Jan 11 01:24 memory_monitor_summary.json
[2026-01-11 01:25:42] -rw------- 1 boinc boinc   1516240 Jan 11 01:24 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:25:42] -rw------- 1 boinc boinc   1246149 Jan 11 01:24 log.47962010._001297.job.log.tgz.1
[2026-01-11 01:25:42] -rw------- 1 boinc boinc      8564 Jan 11 01:24 heartbeat.json
[2026-01-11 01:25:42] -rw------- 1 boinc boinc        95 Jan 11 01:25 pilot_heartbeat.json
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc      8192 Jan 11 01:25 boinc_mmap_file
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc        29 Jan 11 01:25 wrapper_checkpoint.txt
[2026-01-11 01:25:42] -rw------- 1 boinc boinc      4824 Jan 11 01:25 pilotlog.txt
[2026-01-11 01:25:42] -rw------- 1 boinc boinc   3613904 Jan 11 01:25 log.47962010._001297.job.log.1
[2026-01-11 01:25:42] -rw------- 1 boinc boinc       353 Jan 11 01:25 output.list
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc       620 Jan 11 01:25 runtime_log
[2026-01-11 01:25:42] -rw------- 1 boinc boinc   4884480 Jan 11 01:25 result.tar.gz
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc      8903 Jan 11 01:25 runtime_log.err
[2026-01-11 01:25:42] -rw------- 1 boinc boinc       667 Jan 11 01:25 JkiMDmSsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkHhKDmCD0LMn.diag
[2026-01-11 01:25:42] -rw-r--r-- 1 boinc boinc      8880 Jan 11 01:25 stderr.txt
[2026-01-11 01:25:42] HITS file was successfully produced:
[2026-01-11 01:25:42] -rw------- 1 boinc boinc 780855384 Jan 11 01:24 shared/HITS.pool.root.1
[2026-01-11 01:25:42]  *** Contents of shared directory: ***
[2026-01-11 01:25:42] total 1150696
[2026-01-11 01:25:42] -rw-r--r-- 2 boinc boinc 391949667 Jan 10 18:17 ATLAS.root_0
[2026-01-11 01:25:42] -rw-r--r-- 2 boinc boinc    592615 Jan 10 18:17 input.tar.gz
[2026-01-11 01:25:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 18:17 start_atlas.sh
[2026-01-11 01:25:42] -rw------- 1 boinc boinc 780855384 Jan 11 01:24 HITS.pool.root.1
[2026-01-11 01:25:42] -rw------- 1 boinc boinc   4884480 Jan 11 01:25 result.tar.gz
01:25:43 (1084822): run_atlas exited; CPU time 100312.147359
01:25:43 (1084822): called boinc_finish(0)

</stderr_txt>
]]>

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