Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 15:42:07 (3420): vboxwrapper version 26210
2026-01-10 15:42:07 (3420): BOINC client version: 7.20.2
2026-01-10 15:42:08 (3420): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-01-10 15:42:08 (3420): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 15:42:08 (3420): Create VM. (boinc_76caa2a943425b47, slot#9)
2026-01-10 15:42:09 (3420): Setting Memory Size for VM. (4800MB)
2026-01-10 15:42:09 (3420): Setting CPU Count for VM. (8)
2026-01-10 15:42:09 (3420): Setting Chipset Options for VM.
2026-01-10 15:42:10 (3420): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 15:42:10 (3420): Setting Boot Options for VM.
2026-01-10 15:42:10 (3420): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 15:42:11 (3420): Enabling VM Network Access.
2026-01-10 15:42:11 (3420): Disabling USB Support for VM.
2026-01-10 15:42:11 (3420): Disabling COM Port Support for VM.
2026-01-10 15:42:11 (3420): Disabling LPT Port Support for VM.
2026-01-10 15:42:12 (3420): Disabling Audio Support for VM.
2026-01-10 15:42:12 (3420): Disabling Clipboard Support for VM.
2026-01-10 15:42:12 (3420): Disabling Drag and Drop Support for VM.
2026-01-10 15:42:12 (3420): Adding storage controller(s) to VM.
2026-01-10 15:42:13 (3420): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 15:42:14 (3420): Adding VirtualBox Guest Additions to VM.
2026-01-10 15:42:14 (3420): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 15:42:14 (3420): forwarding host port 58230 to guest port 80
2026-01-10 15:42:15 (3420): Enabling remote desktop for VM.
2026-01-10 15:42:15 (3420): Required extension pack not installed, remote desktop not enabled.
2026-01-10 15:42:15 (3420): Enabling shared directory for VM.
2026-01-10 15:42:15 (3420): Starting VM using VBoxManage interface. (boinc_76caa2a943425b47, slot#9)
2026-01-10 15:42:21 (3420): Successfully started VM. (PID = '3980')
2026-01-10 15:42:21 (3420): Reporting VM Process ID to BOINC.
2026-01-10 15:42:21 (3420): Guest Log: BIOS: VirtualBox 6.1.34
2026-01-10 15:42:21 (3420): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 15:42:21 (3420): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 15:42:21 (3420): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 15:42:21 (3420): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 15:42:21 (3420): Detected: Web Application Enabled (http://localhost:58230)
2026-01-10 15:42:21 (3420): Preference change detected
2026-01-10 15:42:21 (3420): Setting CPU throttle for VM. (80%)
2026-01-10 15:42:21 (3420): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 15:42:23 (3420): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 15:42:23 (3420): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 15:42:26 (3420): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 15:42:26 (3420): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 15:42:26 (3420): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 15:42:30 (3420): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 15:42:30 (3420): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-10 15:42:36 (3420): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000119 main     Log opened 2026-01-10T15:42:33.901663000Z
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000203 main     OS Product: Linux
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000237 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000265 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000293 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000293 main     Process ID: 1367
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.000294 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 15:42:36 (3420): Guest Log: 00:00:00.001574 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 15:42:36 (3420): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 15:42:36 (3420): Guest Log: [INFO] Mounting shared directory
2026-01-10 15:42:36 (3420): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 15:42:39 (3420): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 15:42:39 (3420): Guest Log: [INFO] Detected branch: prod
2026-01-10 15:42:39 (3420): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 15:42:39 (3420): Guest Log: Copying input files
2026-01-10 15:42:41 (3420): Guest Log: Copied input files into RunAtlas.
2026-01-10 15:42:41 (3420): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 15:42:41 (3420): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 15:42:41 (3420): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 15:42:41 (3420): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 15:42:46 (3420): Guest Log: 00:00:10.013742 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 160 885 000ns (GuestNow=1 768 056 165 744 678 000 ns GuestLast=1 768 059 753 905 563 000 ns fSetTimeLastLoop=true )
2026-01-10 15:42:50 (3420): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 15:42:50 (3420): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 15:42:50 (3420): Guest Log: 2.6.3.0 1644 0 32156 154982 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 15:42:50 (3420): Guest Log: copied the webapp to /var/www
2026-01-10 15:42:51 (3420): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-10 15:42:51 (3420): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-10 15:42:51 (3420): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 15:42:51 (3420): Guest Log:  *** Starting ATLAS job. (PandaID=6963375750 taskID=47962010) ***
2026-01-10 17:22:24 (3420): Status Report: Elapsed Time: '6000.000000'
2026-01-10 17:22:24 (3420): Status Report: CPU Time: '39289.812500'
2026-01-10 19:02:27 (3420): Status Report: Elapsed Time: '12000.000000'
2026-01-10 19:02:27 (3420): Status Report: CPU Time: '82436.984375'
2026-01-10 20:42:31 (3420): Status Report: Elapsed Time: '18000.000000'
2026-01-10 20:42:31 (3420): Status Report: CPU Time: '125606.500000'
2026-01-10 22:22:34 (3420): Status Report: Elapsed Time: '24000.000000'
2026-01-10 22:22:34 (3420): Status Report: CPU Time: '168793.000000'
2026-01-11 00:02:38 (3420): Status Report: Elapsed Time: '30000.000000'
2026-01-11 00:02:38 (3420): Status Report: CPU Time: '211983.703125'
2026-01-11 01:42:41 (3420): Status Report: Elapsed Time: '36000.000000'
2026-01-11 01:42:41 (3420): Status Report: CPU Time: '255164.593750'
2026-01-11 02:30:13 (3420): Guest Log:  *** Job finished ***
2026-01-11 02:30:13 (3420): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:29:49,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:29:49,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:04,853 | INFO     | [monitor] cgroup control has ended
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:04,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101442115392)>', '<ExcThread(monitor, started 140100423907072)>']
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:05,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:05,391 | INFO     | [monitor] control thread has ended
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:09,929 | INFO     | all workflow threads have been joined
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:09,929 | INFO     | end of generic workflow (traces error code: 0)
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:09,929 | INFO     | traces error code: 0
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:09,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,011 [wrapper] ==== pilot stdout END ====
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,016 [wrapper] ==== wrapper stdout RESUME ====
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,020 [wrapper] pilotpid: 6078
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,025 [wrapper] Pilot exit status: 0
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,040 [wrapper] pandaids: 6963375750
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,078 [wrapper] cleanup supervisor_pilot 22621 6079
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,082 [wrapper] Test setup, not cleaning
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,087 [wrapper] apfmon messages muted
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,091 [wrapper] ==== wrapper stdout END ====
2026-01-11 02:30:13 (3420): Guest Log: 2026-01-11 01:30:10,095 [wrapper] ==== wrapper stderr END ====
2026-01-11 02:30:13 (3420): Guest Log:  *** Error codes and diagnostics ***
2026-01-11 02:30:13 (3420): Guest Log:     "exeErrorCode": 0,
2026-01-11 02:30:13 (3420): Guest Log:     "exeErrorDiag": "",
2026-01-11 02:30:13 (3420): Guest Log:     "pilotErrorCode": 0,
2026-01-11 02:30:13 (3420): Guest Log:     "pilotErrorDiag": "",
2026-01-11 02:30:13 (3420): Guest Log:  *** Listing of results directory ***
2026-01-11 02:30:13 (3420): Guest Log: total 811920
2026-01-11 02:30:13 (3420): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 07:13 pilot3.tar.gz
2026-01-11 02:30:13 (3420): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 07:14 runpilot2-wrapper.sh
2026-01-11 02:30:13 (3420): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 07:16 queuedata.json
2026-01-11 02:30:13 (3420): Guest Log: -rwxr-xr-x. 1 atlas atlas     11993 Jan 10 14:42 init_data.xml
2026-01-11 02:30:13 (3420): Guest Log: -rwxr-xr-x. 1 atlas atlas    592609 Jan 10 14:42 input.tar.gz
2026-01-11 02:30:13 (3420): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 14:42 start_atlas.sh
2026-01-11 02:30:13 (3420): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 14:42 EVNT.47962006._000074.pool.root.1 -> /data/./ATLAS.root_0
2026-01-11 02:30:13 (3420): Guest Log: -rw-r--r--. 1 atlas atlas      2891 Jan 10 14:42 pandaJob.out
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas    989556 Jan 10 14:43 agis_schedconf.cvmfs.json
2026-01-11 02:30:13 (3420): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 14:43 pilot3
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas 813916673 Jan 11 01:28 HITS.47962010._000947.pool.root.1
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas      1042 Jan 11 01:29 memory_monitor_summary.json
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 11 01:29 agis_ddmendpoints.agis.ALL.json
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas   1839381 Jan 11 01:29 log.47962010._000947.job.log.tgz.1
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas      8657 Jan 11 01:29 heartbeat.json
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas        95 Jan 11 01:29 pilot_heartbeat.json
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas      5063 Jan 11 01:30 pilotlog.txt
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas   4979233 Jan 11 01:30 log.47962010._000947.job.log.1
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas       353 Jan 11 01:30 output.list
2026-01-11 02:30:13 (3420): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 11 01:30 runtime_log
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas   6840320 Jan 11 01:30 result.tar.gz
2026-01-11 02:30:13 (3420): Guest Log: -rw-r--r--. 1 atlas atlas      8786 Jan 11 01:30 runtime_log.err
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas       672 Jan 11 01:30 2EuKDm7sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9VmKDmFwXk4m.diag
2026-01-11 02:30:13 (3420): Guest Log: Looking for outputfile HITS.47962010._000947.pool.root.1
2026-01-11 02:30:13 (3420): Guest Log: HITS file was successfully produced
2026-01-11 02:30:13 (3420): Guest Log: -rw-------. 1 atlas atlas 813916673 Jan 11 01:28 /home/atlas/RunAtlas/HITS.47962010._000947.pool.root.1
2026-01-11 02:30:17 (3420): Guest Log: Successfully finished the ATLAS job!
2026-01-11 02:30:17 (3420): Guest Log: Copying the results back to the shared directory!
2026-01-11 02:30:17 (3420): Guest Log:  *** Contents of shared directory: ***
2026-01-11 02:30:17 (3420): Guest Log: total 1186128
2026-01-11 02:30:17 (3420): Guest Log: -rwxrwxrwx. 1 root root 393209342 Jan 10 14:42 ATLAS.root_0
2026-01-11 02:30:17 (3420): Guest Log: -rwxrwxrwx. 1 root root 813916673 Jan 11 01:30 HITS.pool.root.1
2026-01-11 02:30:17 (3420): Guest Log: -rwxrwxrwx. 1 root root     11993 Jan 10 14:42 init_data.xml
2026-01-11 02:30:17 (3420): Guest Log: -rwxrwxrwx. 1 root root    592609 Jan  9 21:53 input.tar.gz
2026-01-11 02:30:17 (3420): Guest Log: -rwxrwxrwx. 1 root root   6840320 Jan 11 01:30 result.tar.gz
2026-01-11 02:30:17 (3420): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 21:53 start_atlas.sh
2026-01-11 02:30:17 (3420): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-11 02:30:17 (3420): VM Completion File Detected.
2026-01-11 02:30:17 (3420): Powering off VM.
2026-01-11 02:30:17 (3420): Successfully stopped VM.
2026-01-11 02:30:17 (3420): Deregistering VM. (boinc_76caa2a943425b47, slot#9)
2026-01-11 02:30:17 (3420): Removing network bandwidth throttle group from VM.
2026-01-11 02:30:18 (3420): Removing VM from VirtualBox.
2026-01-11 02:30:23 (3420): called boinc_finish(0)

</stderr_txt>
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