Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:46:39 (2216771): wrapper (7.7.26015): starting
16:46:39 (2216771): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 16:46:39] Arguments: --nthreads 9
[2026-01-09 16:46:39] Threads: 9
[2026-01-09 16:46:39] Checking for CVMFS
[2026-01-09 16:46:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:46:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:46:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:46:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:46:40] 2.13.3.0 12525 93833 171404 154957 3 415 36925690 40960000 19700 16776704 0 529425943 99.653 495582709 35665 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:46:40] CVMFS is ok
[2026-01-09 16:46:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:46:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:46:40] Further information can be found at the LHC@home message board.
[2026-01-09 16:46:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:46:40] Checking for apptainer binary...
[2026-01-09 16:46:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:46:40] Running /usr/bin/apptainer --version
[2026-01-09 16:46:40] apptainer version 1.4.5-2.el9
[2026-01-09 16:46:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:46:40] c7-4-30.aglt2.org
[2026-01-09 16:46:40] apptainer works
[2026-01-09 16:46:40] Set ATHENA_PROC_NUMBER=9
[2026-01-09 16:46:40] Set ATHENA_CORE_NUMBER=9
[2026-01-09 16:46:40] Starting ATLAS job with PandaID=6963375854
[2026-01-09 16:46:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:43:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:43:19] 2026-01-10 09:42:25,053 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:43:19] 2026-01-10 09:42:25,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:43:19] 2026-01-10 09:42:25,063 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:43:19] 2026-01-10 09:42:25,064 | INFO     | sum of square deviations: 107723784826.04823
[2026-01-10 04:43:19] 2026-01-10 09:42:25,073 | INFO     | sum of deviations: 1683861721548.3079
[2026-01-10 04:43:19] 2026-01-10 09:42:25,074 | INFO     | mean x: 1768016675.2944524
[2026-01-10 04:43:19] 2026-01-10 09:42:25,074 | INFO     | mean y: 2964765.694167852
[2026-01-10 04:43:19] 2026-01-10 09:42:25,074 | INFO     | intersect: -27633416627.65206
[2026-01-10 04:43:19] 2026-01-10 09:42:25,074 | INFO     | chi2: 7.148750294732304
[2026-01-10 04:43:19] 2026-01-10 09:42:25,075 | INFO     | sum of square deviations: 105441684690.11037
[2026-01-10 04:43:19] 2026-01-10 09:42:25,085 | INFO     | sum of deviations: 1852107092018.015
[2026-01-10 04:43:19] 2026-01-10 09:42:25,085 | INFO     | mean x: 1768016522.803725
[2026-01-10 04:43:19] 2026-01-10 09:42:25,085 | INFO     | mean y: 2975986.6862464184
[2026-01-10 04:43:19] 2026-01-10 09:42:25,085 | INFO     | intersect: -31052634992.15596
[2026-01-10 04:43:19] 2026-01-10 09:42:25,086 | INFO     | chi2: 5.035250655701247
[2026-01-10 04:43:19] 2026-01-10 09:42:25,086 | INFO     | current chi2=5.035250655701247 (change=29.56460292910819 %)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,086 | INFO     | sum of square deviations: 103191880095.53238
[2026-01-10 04:43:19] 2026-01-10 09:42:25,095 | INFO     | sum of deviations: 1831420529215.831
[2026-01-10 04:43:19] 2026-01-10 09:42:25,096 | INFO     | mean x: 1768016370.3073592
[2026-01-10 04:43:19] 2026-01-10 09:42:25,096 | INFO     | mean y: 2974582.6017316016
[2026-01-10 04:43:19] 2026-01-10 09:42:25,096 | INFO     | intersect: -31375283799.481403
[2026-01-10 04:43:19] 2026-01-10 09:42:25,096 | INFO     | chi2: 5.022258089656932
[2026-01-10 04:43:19] 2026-01-10 09:42:25,097 | INFO     | current chi2=5.022258089656932 (change=0.2580321603176428 %)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,097 | INFO     | right removable region: 692
[2026-01-10 04:43:19] 2026-01-10 09:42:25,097 | INFO     | sum of square deviations: 105441129590.11032
[2026-01-10 04:43:19] 2026-01-10 09:42:25,107 | INFO     | sum of deviations: 1406854986370.4136
[2026-01-10 04:43:19] 2026-01-10 09:42:25,107 | INFO     | mean x: 1768016827.803725
[2026-01-10 04:43:19] 2026-01-10 09:42:25,108 | INFO     | mean y: 2983267.1489971345
[2026-01-10 04:43:19] 2026-01-10 09:42:25,108 | INFO     | intersect: -23586893850.55373
[2026-01-10 04:43:19] 2026-01-10 09:42:25,108 | INFO     | chi2: 3.3906129072773448
[2026-01-10 04:43:19] 2026-01-10 09:42:25,108 | INFO     | current chi2=3.3906129072773448 (change=52.57055055097135 %)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,109 | INFO     | sum of square deviations: 103190940079.05055
[2026-01-10 04:43:19] 2026-01-10 09:42:25,118 | INFO     | sum of deviations: 1256906454079.6973
[2026-01-10 04:43:19] 2026-01-10 09:42:25,119 | INFO     | mean x: 1768016980.3131313
[2026-01-10 04:43:19] 2026-01-10 09:42:25,119 | INFO     | mean y: 2993420.2640692643
[2026-01-10 04:43:19] 2026-01-10 09:42:25,119 | INFO     | intersect: -21532152511.88566
[2026-01-10 04:43:19] 2026-01-10 09:42:25,119 | INFO     | chi2: 2.415329408642871
[2026-01-10 04:43:19] 2026-01-10 09:42:25,119 | INFO     | current chi2=2.415329408642871 (change=28.764224206815296 %)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,120 | INFO     | sum of square deviations: 100973152828.92427
[2026-01-10 04:43:19] 2026-01-10 09:42:25,129 | INFO     | sum of deviations: 1200900419310.5925
[2026-01-10 04:43:19] 2026-01-10 09:42:25,129 | INFO     | mean x: 1768017132.8168604
[2026-01-10 04:43:19] 2026-01-10 09:42:25,130 | INFO     | mean y: 2997271.052325581
[2026-01-10 04:43:19] 2026-01-10 09:42:25,130 | INFO     | intersect: -21024498223.174477
[2026-01-10 04:43:19] 2026-01-10 09:42:25,130 | INFO     | chi2: 2.3713934516522013
[2026-01-10 04:43:19] 2026-01-10 09:42:25,130 | INFO     | current chi2=2.3713934516522013 (change=1.819046165440285 %)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,130 | INFO     | left removable region: 30
[2026-01-10 04:43:19] 2026-01-10 09:42:25,131 | INFO     | sum of square deviations: 89952266179.7118
[2026-01-10 04:43:19] 2026-01-10 09:42:25,140 | INFO     | sum of deviations: 1206342281161.3667
[2026-01-10 04:43:19] 2026-01-10 09:42:25,140 | INFO     | mean x: 1768017254.8293052
[2026-01-10 04:43:19] 2026-01-10 09:42:25,140 | INFO     | mean y: 3017804.012084592
[2026-01-10 04:43:19] 2026-01-10 09:42:25,140 | INFO     | intersect: -23707712996.947872
[2026-01-10 04:43:19] 2026-01-10 09:42:25,141 | INFO     | chi2: 0.1473138529258479
[2026-01-10 04:43:19] 2026-01-10 09:42:25,141 | INFO     | current memory leak: 13.41 B/s (using 662 data points, chi2=0.15)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | could have reported an average CPU frequency of 3199 MHz (27 samples)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | ..............................
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | . Timing measurements:
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | . get job = 0 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | . initial setup = 2 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | . payload setup = 14 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | . stage-in = 0 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,142 | INFO     | . payload execution = 42879 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,143 | INFO     | . stage-out = 2 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,143 | INFO     | . log creation = 0 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,143 | INFO     | ..............................
[2026-01-10 04:43:19] 2026-01-10 09:42:25,442 | INFO     | 
[2026-01-10 04:43:19] 2026-01-10 09:42:25,442 | INFO     | job summary report
[2026-01-10 04:43:19] 2026-01-10 09:42:25,442 | INFO     | --------------------------------------------------
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | PanDA job id: 6963375854
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | task id: 47962010
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | errors: (none)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | pilot state: finished 
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | transexitcode: 0
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | exeerrorcode: 0
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | exeerrordiag: 
[2026-01-10 04:43:19] 2026-01-10 09:42:25,443 | INFO     | exitcode: 0
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | exitmsg: OK
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | cpuconsumptiontime: 207319 s
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | nevents: 900
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | neventsw: 0
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | pid: 2226972
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | pgrp: 2226972
[2026-01-10 04:43:19] 2026-01-10 09:42:25,444 | INFO     | corecount: 9
[2026-01-10 04:43:19] 2026-01-10 09:42:25,445 | INFO     | event service: False
[2026-01-10 04:43:19] 2026-01-10 09:42:25,445 | INFO     | sizes: {0: 2284622, 6: 2284884, 11: 2284912, 42898: 2330442, 42901: 2339492, 42908: 2339682}
[2026-01-10 04:43:19] 2026-01-10 09:42:25,445 | INFO     | --------------------------------------------------
[2026-01-10 04:43:19] 2026-01-10 09:42:25,445 | INFO     | 
[2026-01-10 04:43:19] 2026-01-10 09:42:25,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 04:43:19] 2026-01-10 09:42:25,465 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,465 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,465 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,465 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:43:19] 2026-01-10 09:42:25,467 | INFO     | job 6963375854 has completed (purged errors)
[2026-01-10 04:43:19] 2026-01-10 09:42:25,467 | INFO     | overall cleanup function is called
[2026-01-10 04:43:19] 2026-01-10 09:42:26,484 | INFO     | --- collectZombieJob: --- 10, [2226972]
[2026-01-10 04:43:19] 2026-01-10 09:42:26,484 | INFO     | zombie collector waiting for pid 2226972
[2026-01-10 04:43:19] 2026-01-10 09:42:26,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:43:19] 2026-01-10 09:42:26,485 | INFO     | collected zombie processes
[2026-01-10 04:43:19] 2026-01-10 09:42:26,485 | INFO     | will attempt to kill all subprocesses of pid=2226972
[2026-01-10 04:43:19] 2026-01-10 09:42:26,827 | INFO     | process IDs to be killed: [2226972] (in reverse order)
[2026-01-10 04:43:19] 2026-01-10 09:42:26,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:43:19] 2026-01-10 09:42:26,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:43:19] 2026-01-10 09:42:26,977 | INFO     | did not find any defunct processes belonging to 2226972
[2026-01-10 04:43:19] 2026-01-10 09:42:26,993 | INFO     | did not find any defunct processes belonging to 2226972
[2026-01-10 04:43:19] 2026-01-10 09:42:26,994 | INFO     | ready for new job
[2026-01-10 04:43:19] 2026-01-10 09:42:26,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:43:19] 2026-01-10 09:42:26,997 | INFO     | ***************************************
[2026-01-10 04:43:19] 2026-01-10 09:42:26,998 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:43:19] 2026-01-10 09:42:26,998 | INFO     | ***************************************
[2026-01-10 04:43:19] 2026-01-10 09:42:26,998 | INFO     | 
[2026-01-10 04:43:19] 2026-01-10 09:42:27,003 | INFO     | architecture information:
[2026-01-10 04:43:19] 2026-01-10 09:42:27,003 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:43:19] 2026-01-10 09:42:27,023 | INFO     | cat /etc/os-release:
[2026-01-10 04:43:19] NAME="CentOS Linux"
[2026-01-10 04:43:19] VERSION="7 (Core)"
[2026-01-10 04:43:19] ID="centos"
[2026-01-10 04:43:19] ID_LIKE="rhel fedora"
[2026-01-10 04:43:19] VERSION_ID="7"
[2026-01-10 04:43:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:43:19] ANSI_COLOR="0;31"
[2026-01-10 04:43:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:43:19] HOME_URL="https://www.centos.org/"
[2026-01-10 04:43:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:43:19] 
[2026-01-10 04:43:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:43:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:43:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:43:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:43:19] 
[2026-01-10 04:43:19] 2026-01-10 09:42:27,024 | INFO     | ***************************************
[2026-01-10 04:43:19] 2026-01-10 09:42:27,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 04:43:19] 2026-01-10 09:42:27,551 | INFO     | sufficient remaining disk space (127668322304 B)
[2026-01-10 04:43:19] 2026-01-10 09:42:27,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:43:19] 2026-01-10 09:42:27,551 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:43:19] 2026-01-10 09:42:27,552 | INFO     | update_server=False
[2026-01-10 04:43:19] 2026-01-10 09:42:27,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:43:19] 2026-01-10 09:42:27,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:43:19] 2026-01-10 09:42:27,553 | INFO     | aborting loop
[2026-01-10 04:43:19] 2026-01-10 09:42:28,042 | INFO     | all job control threads have been joined
[2026-01-10 04:43:19] 2026-01-10 09:42:28,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:43:19] 2026-01-10 09:42:28,556 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:28,557 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:28,601 | INFO     | all data control threads have been joined
[2026-01-10 04:43:19] 2026-01-10 09:42:28,684 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:28,718 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:28,743 | INFO     | all payload control threads have been joined
[2026-01-10 04:43:19] 2026-01-10 09:42:28,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:43:19] 2026-01-10 09:42:28,837 | INFO     | [job] validate thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:28,975 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:28,998 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:29,048 | INFO     | [job] control thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:29,314 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:29,606 | INFO     | [data] control thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:29,646 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:29,748 | INFO     | [payload] control thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:30,220 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:30,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:43:19] 2026-01-10 09:42:31,230 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:32,767 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:38,278 | INFO     | job.realtimelogging is not enabled
[2026-01-10 04:43:19] 2026-01-10 09:42:39,284 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:43:19] 2026-01-10 09:42:57,098 | INFO     | PID=2220429 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 04:43:19] 2026-01-10 09:42:57,098 | INFO     | .. there are 14 such processes running
[2026-01-10 04:43:19] 2026-01-10 09:42:57,098 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:43:19] 2026-01-10 09:42:57,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:43:19] 2026-01-10 09:42:57,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:43:19] 2026-01-10 09:43:12,743 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:43:19] 2026-01-10 09:43:13,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433046886208)>', '<ExcThread(monitor, started 140432705038080)>']
[2026-01-10 04:43:19] 2026-01-10 09:43:14,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:43:19] 2026-01-10 09:43:14,141 | INFO     | [monitor] control thread has ended
[2026-01-10 04:43:19] 2026-01-10 09:43:18,769 | INFO     | all workflow threads have been joined
[2026-01-10 04:43:19] 2026-01-10 09:43:18,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:43:19] 2026-01-10 09:43:18,770 | INFO     | traces error code: 0
[2026-01-10 04:43:19] 2026-01-10 09:43:18,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:43:19] 2026-01-10 09:43:18,897 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:43:19] 2026-01-10 09:43:18,901 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:43:19] 2026-01-10 09:43:18,903 [wrapper] pilotpid: 2220429
[2026-01-10 04:43:19] 2026-01-10 09:43:18,904 [wrapper] Pilot exit status: 0
[2026-01-10 04:43:19] 2026-01-10 09:43:18,914 [wrapper] pandaids: 6963375854
[2026-01-10 04:43:19] 2026-01-10 09:43:18,998 [wrapper] cleanup supervisor_pilot 3990950 2220430
[2026-01-10 04:43:19] 2026-01-10 09:43:19,001 [wrapper] Test setup, not cleaning
[2026-01-10 04:43:19] 2026-01-10 09:43:19,003 [wrapper] apfmon messages muted
[2026-01-10 04:43:19] 2026-01-10 09:43:19,006 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:43:19] 2026-01-10 09:43:19,008 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:43:19]  *** Error codes and diagnostics ***
[2026-01-10 04:43:19]     "exeErrorCode": 0,
[2026-01-10 04:43:19]     "exeErrorDiag": "",
[2026-01-10 04:43:19]     "pilotErrorCode": 0,
[2026-01-10 04:43:19]     "pilotErrorDiag": "",
[2026-01-10 04:43:19]  *** Listing of results directory ***
[2026-01-10 04:43:19] total 1161140
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 04:43:19] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:43:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:46 run_atlas
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:46 job.xml
[2026-01-10 04:43:19] -rw-r--r--. 2 boincer umatlas 391547733 Jan  9 16:46 EVNT.47962006._000081.pool.root.1
[2026-01-10 04:43:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:46 start_atlas.sh
[2026-01-10 04:43:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:46 shared
[2026-01-10 04:43:19] -rw-r--r--. 2 boincer umatlas    592614 Jan  9 16:46 input.tar.gz
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:46 boinc_lockfile
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 16:46 pandaJob.out
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas        57 Jan  9 16:46 setup.sh.local
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas    989398 Jan  9 16:46 agis_schedconf.cvmfs.json
[2026-01-10 04:43:19] drwx------. 5 boincer umatlas      4096 Jan  9 16:46 pilot3
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas       533 Jan 10 04:35 boinc_task_state.xml
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas      6947 Jan 10 04:39 init_data.xml
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas 777971579 Jan 10 04:41 HITS.47962010._001027.pool.root.1
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas        95 Jan 10 04:42 pilot_heartbeat.json
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas      1062 Jan 10 04:42 memory_monitor_summary.json
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas   2022192 Jan 10 04:42 log.47962010._001027.job.log.tgz.1
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas      8617 Jan 10 04:42 heartbeat.json
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas        29 Jan 10 04:43 wrapper_checkpoint.txt
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:43 boinc_mmap_file
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas      4897 Jan 10 04:43 pilotlog.txt
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas   5759370 Jan 10 04:43 log.47962010._001027.job.log.1
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas       353 Jan 10 04:43 output.list
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:43 runtime_log
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas   7802880 Jan 10 04:43 result.tar.gz
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 04:43 runtime_log.err
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas       664 Jan 10 04:43 neqKDm6sLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcJhKDmx4VsOn.diag
[2026-01-10 04:43:19] -rw-r--r--. 1 boincer umatlas     20980 Jan 10 04:43 stderr.txt
[2026-01-10 04:43:19] HITS file was successfully produced:
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas 777971579 Jan 10 04:41 shared/HITS.pool.root.1
[2026-01-10 04:43:19]  *** Contents of shared directory: ***
[2026-01-10 04:43:19] total 1150336
[2026-01-10 04:43:19] -rw-r--r--. 2 boincer umatlas 391547733 Jan  9 16:46 ATLAS.root_0
[2026-01-10 04:43:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:46 start_atlas.sh
[2026-01-10 04:43:19] -rw-r--r--. 2 boincer umatlas    592614 Jan  9 16:46 input.tar.gz
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas 777971579 Jan 10 04:41 HITS.pool.root.1
[2026-01-10 04:43:19] -rw-------. 1 boincer umatlas   7802880 Jan 10 04:43 result.tar.gz
04:43:20 (2216771): run_atlas exited; CPU time 207537.120315
04:43:20 (2216771): called boinc_finish(0)

</stderr_txt>
]]>

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