Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:43:32 (817384): wrapper (7.7.26015): starting
16:43:32 (817384): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:43:32] Arguments: --nthreads 8
[2026-01-09 16:43:32] Threads: 8
[2026-01-09 16:43:32] Checking for CVMFS
[2026-01-09 16:43:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:43:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:43:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:43:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:43:32] 2.10.1.0 4440 315786 154424 154957 1 97 14670531 18432000 3691 130560 2 333477019 99.988 12489595 7085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-09 16:43:32] CVMFS is ok
[2026-01-09 16:43:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:43:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:43:32] Further information can be found at the LHC@home message board.
[2026-01-09 16:43:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:43:32] Checking for apptainer binary...
[2026-01-09 16:43:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:43:32] Running /usr/bin/apptainer --version
[2026-01-09 16:43:32] apptainer version 1.1.9-1.el8
[2026-01-09 16:43:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:43:33] c-16-31.aglt2.org
[2026-01-09 16:43:33] apptainer works
[2026-01-09 16:43:33] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:43:33] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:43:33] Starting ATLAS job with PandaID=6963375839
[2026-01-09 16:43:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:38:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:38:56] 2026-01-10 09:37:46,319 | INFO     | stage-out finished correctly
[2026-01-10 04:38:56] 2026-01-10 09:37:47,210 | INFO     | time since job start (42842s) is within the limit (349056.0s)
[2026-01-10 04:38:56] 2026-01-10 09:37:48,554 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 04:38:56] 2026-01-10 09:37:48,618 | INFO     | monitor loop #3155: job 0:6963375839 is in state 'finished'
[2026-01-10 04:38:56] 2026-01-10 09:37:48,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:38:56] 2026-01-10 09:37:49,145 | INFO     | job 6963375839 has state=finished
[2026-01-10 04:38:56] 2026-01-10 09:37:49,145 | INFO     | preparing for final server update for job 6963375839 in state='finished'
[2026-01-10 04:38:56] 2026-01-10 09:37:49,145 | INFO     | this job has now completed (state=finished)
[2026-01-10 04:38:56] 2026-01-10 09:37:49,145 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 04:38:56] 2026-01-10 09:37:49,146 | INFO     | log transfer has been attempted: DONE
[2026-01-10 04:38:56] 2026-01-10 09:37:49,146 | INFO     | job 6963375839 has finished - writing final server update
[2026-01-10 04:38:56] 2026-01-10 09:37:49,146 | INFO     | total number of processed events: 900 (read)
[2026-01-10 04:38:56] 2026-01-10 09:37:49,147 | INFO     | executing command: lscpu
[2026-01-10 04:38:56] 2026-01-10 09:37:49,199 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 04:38:56] 2026-01-10 09:37:49,215 | INFO     | time since job start (42844s) is within the limit (349056.0s)
[2026-01-10 04:38:56] 2026-01-10 09:37:51,141 | INFO     | monitor loop #3156: job 0:6963375839 is in state 'finished'
[2026-01-10 04:38:56] 2026-01-10 09:37:51,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:38:56] 2026-01-10 09:37:51,221 | INFO     | time since job start (42846s) is within the limit (349056.0s)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,208 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 04:38:56] 2026-01-10 09:37:52,215 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 3200.2673999999997
[2026-01-10 04:38:56] 2026-01-10 09:37:52,219 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963375839/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,220 | INFO     | extracted standard info from prmon json
[2026-01-10 04:38:56] 2026-01-10 09:37:52,220 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:38:56] 2026-01-10 09:37:52,220 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:38:56] 2026-01-10 09:37:52,229 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:38:56] 2026-01-10 09:37:52,230 | INFO     | sum of square deviations: 107272450761.46426
[2026-01-10 04:38:56] 2026-01-10 09:37:52,238 | INFO     | sum of deviations: 15330760024912.926
[2026-01-10 04:38:56] 2026-01-10 09:37:52,238 | INFO     | mean x: 1768016434.5071225
[2026-01-10 04:38:56] 2026-01-10 09:37:52,238 | INFO     | mean y: 5260225.713675214
[2026-01-10 04:38:56] 2026-01-10 09:37:52,238 | INFO     | intersect: -252669452481.3058
[2026-01-10 04:38:56] 2026-01-10 09:37:52,239 | INFO     | chi2: 17.346018303097853
[2026-01-10 04:38:56] 2026-01-10 09:37:52,239 | INFO     | sum of square deviations: 104996586358.96404
[2026-01-10 04:38:56] 2026-01-10 09:37:52,247 | INFO     | sum of deviations: 15721866733841.568
[2026-01-10 04:38:56] 2026-01-10 09:37:52,248 | INFO     | mean x: 1768016282.0071735
[2026-01-10 04:38:56] 2026-01-10 09:37:52,248 | INFO     | mean y: 5286409.68866571
[2026-01-10 04:38:56] 2026-01-10 09:37:52,248 | INFO     | intersect: -264732047754.18268
[2026-01-10 04:38:56] 2026-01-10 09:37:52,248 | INFO     | chi2: 13.478904402039797
[2026-01-10 04:38:56] 2026-01-10 09:37:52,248 | INFO     | current chi2=13.478904402039797 (change=22.293957226872188 %)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,248 | INFO     | right removable region: 696
[2026-01-10 04:38:56] 2026-01-10 09:37:52,249 | INFO     | sum of square deviations: 104996583308.96404
[2026-01-10 04:38:56] 2026-01-10 09:37:52,257 | INFO     | sum of deviations: 14860406559996.959
[2026-01-10 04:38:56] 2026-01-10 09:37:52,257 | INFO     | mean x: 1768016587.0071735
[2026-01-10 04:38:56] 2026-01-10 09:37:52,257 | INFO     | mean y: 5291727.408895265
[2026-01-10 04:38:56] 2026-01-10 09:37:52,257 | INFO     | intersect: -250226139236.70468
[2026-01-10 04:38:56] 2026-01-10 09:37:52,258 | INFO     | chi2: 15.278438305392624
[2026-01-10 04:38:56] 2026-01-10 09:37:52,258 | INFO     | current chi2=15.278438305392624 (change=11.919623060330661 %)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,258 | INFO     | left removable region: 10
[2026-01-10 04:38:56] 2026-01-10 09:37:52,259 | INFO     | sum of square deviations: 100103466753.46342
[2026-01-10 04:38:56] 2026-01-10 09:37:52,266 | INFO     | sum of deviations: 15001043250565.771
[2026-01-10 04:38:56] 2026-01-10 09:37:52,266 | INFO     | mean x: 1768016556.5072887
[2026-01-10 04:38:56] 2026-01-10 09:37:52,267 | INFO     | mean y: 5342259.543731779
[2026-01-10 04:38:56] 2026-01-10 09:37:52,267 | INFO     | intersect: -264941454210.5653
[2026-01-10 04:38:56] 2026-01-10 09:37:52,267 | INFO     | chi2: 10.825862216381235
[2026-01-10 04:38:56] 2026-01-10 09:37:52,267 | INFO     | current memory leak: 149.86 B/s (using 686 data points, chi2=10.83)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | could have reported an average CPU frequency of 3056 MHz (27 samples)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | ..............................
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | . Timing measurements:
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | . get job = 0 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | . initial setup = 2 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | . payload setup = 6 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | . stage-in = 0 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,268 | INFO     | . payload execution = 42811 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,269 | INFO     | . stage-out = 2 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,269 | INFO     | . log creation = 0 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,269 | INFO     | ..............................
[2026-01-10 04:38:56] 2026-01-10 09:37:52,332 | INFO     | 
[2026-01-10 04:38:56] 2026-01-10 09:37:52,332 | INFO     | job summary report
[2026-01-10 04:38:56] 2026-01-10 09:37:52,333 | INFO     | --------------------------------------------------
[2026-01-10 04:38:56] 2026-01-10 09:37:52,333 | INFO     | PanDA job id: 6963375839
[2026-01-10 04:38:56] 2026-01-10 09:37:52,333 | INFO     | task id: 47962010
[2026-01-10 04:38:56] 2026-01-10 09:37:52,333 | INFO     | errors: (none)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:38:56] 2026-01-10 09:37:52,333 | INFO     | pilot state: finished 
[2026-01-10 04:38:56] 2026-01-10 09:37:52,334 | INFO     | transexitcode: 0
[2026-01-10 04:38:56] 2026-01-10 09:37:52,334 | INFO     | exeerrorcode: 0
[2026-01-10 04:38:56] 2026-01-10 09:37:52,334 | INFO     | exeerrordiag: 
[2026-01-10 04:38:56] 2026-01-10 09:37:52,334 | INFO     | exitcode: 0
[2026-01-10 04:38:56] 2026-01-10 09:37:52,334 | INFO     | exitmsg: OK
[2026-01-10 04:38:56] 2026-01-10 09:37:52,334 | INFO     | cpuconsumptiontime: 333978 s
[2026-01-10 04:38:56] 2026-01-10 09:37:52,335 | INFO     | nevents: 900
[2026-01-10 04:38:56] 2026-01-10 09:37:52,335 | INFO     | neventsw: 0
[2026-01-10 04:38:56] 2026-01-10 09:37:52,335 | INFO     | pid: 839043
[2026-01-10 04:38:56] 2026-01-10 09:37:52,335 | INFO     | pgrp: 839043
[2026-01-10 04:38:56] 2026-01-10 09:37:52,335 | INFO     | corecount: 8
[2026-01-10 04:38:56] 2026-01-10 09:37:52,335 | INFO     | event service: False
[2026-01-10 04:38:56] 2026-01-10 09:37:52,336 | INFO     | sizes: {0: 2284622, 1: 2284622, 5: 2284912, 12: 2284968, 42821: 2330112, 42824: 2339106, 42826: 2339290, 42830: 2339536}
[2026-01-10 04:38:56] 2026-01-10 09:37:52,336 | INFO     | --------------------------------------------------
[2026-01-10 04:38:56] 2026-01-10 09:37:52,336 | INFO     | 
[2026-01-10 04:38:56] 2026-01-10 09:37:52,336 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 04:38:56] 2026-01-10 09:37:52,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:38:56] 2026-01-10 09:37:52,357 | INFO     | job 6963375839 has completed (purged errors)
[2026-01-10 04:38:56] 2026-01-10 09:37:52,357 | INFO     | overall cleanup function is called
[2026-01-10 04:38:56] 2026-01-10 09:37:53,376 | INFO     | --- collectZombieJob: --- 10, [839043]
[2026-01-10 04:38:56] 2026-01-10 09:37:53,376 | INFO     | zombie collector waiting for pid 839043
[2026-01-10 04:38:56] 2026-01-10 09:37:53,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:38:56] 2026-01-10 09:37:53,377 | INFO     | collected zombie processes
[2026-01-10 04:38:56] 2026-01-10 09:37:53,377 | INFO     | will attempt to kill all subprocesses of pid=839043
[2026-01-10 04:38:56] 2026-01-10 09:37:53,575 | INFO     | process IDs to be killed: [839043] (in reverse order)
[2026-01-10 04:38:56] 2026-01-10 09:37:53,637 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:38:56] 2026-01-10 09:37:53,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:38:56] 2026-01-10 09:37:53,647 | INFO     | did not find any defunct processes belonging to 839043
[2026-01-10 04:38:56] 2026-01-10 09:37:53,654 | INFO     | did not find any defunct processes belonging to 839043
[2026-01-10 04:38:56] 2026-01-10 09:37:53,654 | INFO     | ready for new job
[2026-01-10 04:38:56] 2026-01-10 09:37:53,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:38:56] 2026-01-10 09:37:53,657 | INFO     | ***************************************
[2026-01-10 04:38:56] 2026-01-10 09:37:53,657 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:38:56] 2026-01-10 09:37:53,657 | INFO     | ***************************************
[2026-01-10 04:38:56] 2026-01-10 09:37:53,657 | INFO     | 
[2026-01-10 04:38:56] 2026-01-10 09:37:53,670 | INFO     | architecture information:
[2026-01-10 04:38:56] 2026-01-10 09:37:53,670 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:38:56] 2026-01-10 09:37:53,681 | INFO     | cat /etc/os-release:
[2026-01-10 04:38:56] NAME="CentOS Linux"
[2026-01-10 04:38:56] VERSION="7 (Core)"
[2026-01-10 04:38:56] ID="centos"
[2026-01-10 04:38:56] ID_LIKE="rhel fedora"
[2026-01-10 04:38:56] VERSION_ID="7"
[2026-01-10 04:38:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:38:56] ANSI_COLOR="0;31"
[2026-01-10 04:38:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:38:56] HOME_URL="https://www.centos.org/"
[2026-01-10 04:38:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:38:56] 
[2026-01-10 04:38:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:38:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:38:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:38:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:38:56] 
[2026-01-10 04:38:56] 2026-01-10 09:37:53,681 | INFO     | ***************************************
[2026-01-10 04:38:56] 2026-01-10 09:37:54,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 04:38:56] 2026-01-10 09:37:54,195 | INFO     | sufficient remaining disk space (104150859776 B)
[2026-01-10 04:38:56] 2026-01-10 09:37:54,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:38:56] 2026-01-10 09:37:54,195 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:38:56] 2026-01-10 09:37:54,195 | INFO     | update_server=False
[2026-01-10 04:38:56] 2026-01-10 09:37:54,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:38:56] 2026-01-10 09:37:54,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:38:56] 2026-01-10 09:37:54,365 | INFO     | all job control threads have been joined
[2026-01-10 04:38:56] 2026-01-10 09:37:54,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:38:56] 2026-01-10 09:37:54,501 | INFO     | all data control threads have been joined
[2026-01-10 04:38:56] 2026-01-10 09:37:54,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:38:56] 2026-01-10 09:37:54,649 | INFO     | aborting loop
[2026-01-10 04:38:56] 2026-01-10 09:37:54,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:38:56] 2026-01-10 09:37:54,690 | INFO     | all payload control threads have been joined
[2026-01-10 04:38:56] 2026-01-10 09:37:55,201 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,201 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,370 | INFO     | [job] control thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,372 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,394 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,507 | INFO     | [data] control thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,654 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,695 | INFO     | [payload] control thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:55,973 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:56,096 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:56,313 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:56,397 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:56,457 | INFO     | [job] validate thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:56,702 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:56,731 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:37:58,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:38:56] 2026-01-10 09:38:24,533 | INFO     | PID=823918 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:38:56] 2026-01-10 09:38:24,533 | INFO     | .. there are 2 such processes running
[2026-01-10 04:38:56] 2026-01-10 09:38:24,533 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:38:56] 2026-01-10 09:38:24,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:38:56] 2026-01-10 09:38:24,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:38:56] 2026-01-10 09:38:49,151 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:38:56] 2026-01-10 09:38:50,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885099235136)>', '<ExcThread(monitor, started 139884517906176)>']
[2026-01-10 04:38:56] 2026-01-10 09:38:51,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:38:56] 2026-01-10 09:38:51,665 | INFO     | [monitor] control thread has ended
[2026-01-10 04:38:56] 2026-01-10 09:38:55,798 | INFO     | all workflow threads have been joined
[2026-01-10 04:38:56] 2026-01-10 09:38:55,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:38:56] 2026-01-10 09:38:55,798 | INFO     | traces error code: 0
[2026-01-10 04:38:56] 2026-01-10 09:38:55,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:38:56] 2026-01-10 09:38:55,869 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:38:56] 2026-01-10 09:38:55,871 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:38:56] 2026-01-10 09:38:55,873 [wrapper] pilotpid: 823918
[2026-01-10 04:38:56] 2026-01-10 09:38:55,875 [wrapper] Pilot exit status: 0
[2026-01-10 04:38:56] 2026-01-10 09:38:55,883 [wrapper] pandaids: 6963375839
[2026-01-10 04:38:56] 2026-01-10 09:38:55,928 [wrapper] cleanup supervisor_pilot 2151201 823919
[2026-01-10 04:38:56] 2026-01-10 09:38:55,930 [wrapper] Test setup, not cleaning
[2026-01-10 04:38:56] 2026-01-10 09:38:55,932 [wrapper] apfmon messages muted
[2026-01-10 04:38:56] 2026-01-10 09:38:55,934 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:38:56] 2026-01-10 09:38:55,936 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:38:56]  *** Error codes and diagnostics ***
[2026-01-10 04:38:56]     "exeErrorCode": 0,
[2026-01-10 04:38:56]     "exeErrorDiag": "",
[2026-01-10 04:38:56]     "pilotErrorCode": 0,
[2026-01-10 04:38:56]     "pilotErrorDiag": "",
[2026-01-10 04:38:56]  *** Listing of results directory ***
[2026-01-10 04:38:56] total 1176468
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 04:38:56] -rwx------ 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas       100 Jan  9 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:38:56] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 16:43 run_atlas
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas       105 Jan  9 16:43 job.xml
[2026-01-10 04:38:56] -rw-r--r-- 2 boincer umatlas 393191470 Jan  9 16:43 EVNT.47962006._000080.pool.root.1
[2026-01-10 04:38:56] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 16:43 start_atlas.sh
[2026-01-10 04:38:56] drwxrwx--x 2 boincer umatlas      4096 Jan  9 16:43 shared
[2026-01-10 04:38:56] -rw-r--r-- 2 boincer umatlas    592609 Jan  9 16:43 input.tar.gz
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas         0 Jan  9 16:43 boinc_lockfile
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas      2892 Jan  9 16:43 pandaJob.out
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas        57 Jan  9 16:43 setup.sh.local
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas    989398 Jan  9 16:43 agis_schedconf.cvmfs.json
[2026-01-10 04:38:56] drwx------ 5 boincer umatlas      4096 Jan  9 16:43 pilot3
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas      6014 Jan 10 04:27 init_data.xml
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas       533 Jan 10 04:29 boinc_task_state.xml
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas 791749002 Jan 10 04:37 HITS.47962010._001012.pool.root.1
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas      1063 Jan 10 04:37 memory_monitor_summary.json
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas   1516240 Jan 10 04:37 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas   1938065 Jan 10 04:37 log.47962010._001012.job.log.tgz.1
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas      8645 Jan 10 04:37 heartbeat.json
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas        95 Jan 10 04:38 pilot_heartbeat.json
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 04:38 boinc_mmap_file
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas        29 Jan 10 04:38 wrapper_checkpoint.txt
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas      4823 Jan 10 04:38 pilotlog.txt
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas   5982836 Jan 10 04:38 log.47962010._001012.job.log.1
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas       353 Jan 10 04:38 output.list
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas       620 Jan 10 04:38 runtime_log
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas   7936000 Jan 10 04:38 result.tar.gz
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas       664 Jan 10 04:38 u9gKDm6sLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWJhKDm170ldm.diag
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas      9338 Jan 10 04:38 runtime_log.err
[2026-01-10 04:38:56] -rw-r--r-- 1 boincer umatlas     21593 Jan 10 04:38 stderr.txt
[2026-01-10 04:38:56] HITS file was successfully produced:
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas 791749002 Jan 10 04:37 shared/HITS.pool.root.1
[2026-01-10 04:38:56]  *** Contents of shared directory: ***
[2026-01-10 04:38:56] total 1165528
[2026-01-10 04:38:56] -rw-r--r-- 2 boincer umatlas 393191470 Jan  9 16:43 ATLAS.root_0
[2026-01-10 04:38:56] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 16:43 start_atlas.sh
[2026-01-10 04:38:56] -rw-r--r-- 2 boincer umatlas    592609 Jan  9 16:43 input.tar.gz
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas 791749002 Jan 10 04:37 HITS.pool.root.1
[2026-01-10 04:38:56] -rw------- 1 boincer umatlas   7936000 Jan 10 04:38 result.tar.gz
04:38:58 (817384): run_atlas exited; CPU time 334216.552297
04:38:58 (817384): called boinc_finish(0)

</stderr_txt>
]]>

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