Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:04 (2279008): wrapper (7.7.26015): starting
16:48:04 (2279008): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:48:04] Arguments: --nthreads 8
[2026-01-09 16:48:04] Threads: 8
[2026-01-09 16:48:04] Checking for CVMFS
[2026-01-09 16:48:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:48:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:48:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:48:06] 2.13.3.0 11754 93924 227100 154957 1 559 16884722 32935937 19660 16776704 0 488190426 99.518 638708545 17688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:48:06] CVMFS is ok
[2026-01-09 16:48:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:48:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:48:06] Further information can be found at the LHC@home message board.
[2026-01-09 16:48:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:48:06] Checking for apptainer binary...
[2026-01-09 16:48:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:48:06] Running /usr/bin/apptainer --version
[2026-01-09 16:48:06] apptainer version 1.4.5-2.el9
[2026-01-09 16:48:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:48:06] c7-2-38.aglt2.org
[2026-01-09 16:48:06] apptainer works
[2026-01-09 16:48:06] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:48:06] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:48:06] Starting ATLAS job with PandaID=6964539349
[2026-01-09 16:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:10:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:10:31] 2026-01-10 04:09:39,136 | INFO     | executing command: lscpu
[2026-01-09 23:10:31] 2026-01-10 04:09:39,253 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:10:31] 2026-01-10 04:09:39,424 | INFO     | monitor loop #1539: job 0:6964539349 is in state 'finished'
[2026-01-09 23:10:31] 2026-01-10 04:09:39,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:10:31] 2026-01-10 04:09:39,973 | INFO     | time since job start (22852s) is within the limit (349056.0s)
[2026-01-09 23:10:31] 2026-01-10 04:09:41,931 | INFO     | monitor loop #1540: job 0:6964539349 is in state 'finished'
[2026-01-09 23:10:31] 2026-01-10 04:09:41,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:10:31] 2026-01-10 04:09:41,983 | INFO     | time since job start (22854s) is within the limit (349056.0s)
[2026-01-09 23:10:31] 2026-01-10 04:09:43,990 | INFO     | time since job start (22856s) is within the limit (349056.0s)
[2026-01-09 23:10:31] 2026-01-10 04:09:44,436 | INFO     | monitor loop #1541: job 0:6964539349 is in state 'finished'
[2026-01-09 23:10:31] 2026-01-10 04:09:44,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:10:31] 2026-01-10 04:09:45,998 | INFO     | time since job start (22858s) is within the limit (349056.0s)
[2026-01-09 23:10:31] 2026-01-10 04:09:46,943 | INFO     | monitor loop #1542: job 0:6964539349 is in state 'finished'
[2026-01-09 23:10:31] 2026-01-10 04:09:46,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,004 | INFO     | time since job start (22861s) is within the limit (349056.0s)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,120 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:10:31] 2026-01-10 04:09:48,169 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3289.404208333333
[2026-01-09 23:10:31] 2026-01-10 04:09:48,204 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6964539349/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,204 | INFO     | extracted standard info from prmon json
[2026-01-09 23:10:31] 2026-01-10 04:09:48,204 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:10:31] 2026-01-10 04:09:48,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:10:31] 2026-01-10 04:09:48,209 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:10:31] 2026-01-10 04:09:48,209 | INFO     | sum of square deviations: 16091790325.57631
[2026-01-09 23:10:31] 2026-01-10 04:09:48,212 | INFO     | sum of deviations: 59054064461.713356
[2026-01-09 23:10:31] 2026-01-10 04:09:48,212 | INFO     | mean x: 1768006770.3565683
[2026-01-09 23:10:31] 2026-01-10 04:09:48,212 | INFO     | mean y: 2252613.9946380695
[2026-01-09 23:10:31] 2026-01-10 04:09:48,212 | INFO     | intersect: -6486023934.043417
[2026-01-09 23:10:31] 2026-01-10 04:09:48,213 | INFO     | chi2: 23.48957614418502
[2026-01-09 23:10:31] 2026-01-10 04:09:48,213 | INFO     | sum of square deviations: 15453344499.93206
[2026-01-09 23:10:31] 2026-01-10 04:09:48,215 | INFO     | sum of deviations: 151854002244.0866
[2026-01-09 23:10:31] 2026-01-10 04:09:48,215 | INFO     | mean x: 1768006617.861413
[2026-01-09 23:10:31] 2026-01-10 04:09:48,215 | INFO     | mean y: 2274774.217391304
[2026-01-09 23:10:31] 2026-01-10 04:09:48,215 | INFO     | intersect: -17371238183.930103
[2026-01-09 23:10:31] 2026-01-10 04:09:48,216 | INFO     | chi2: 20.66212910623844
[2026-01-09 23:10:31] 2026-01-10 04:09:48,216 | INFO     | current chi2=20.66212910623844 (change=12.037028767956425 %)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,216 | INFO     | right removable region: 367
[2026-01-09 23:10:31] 2026-01-10 04:09:48,216 | INFO     | sum of square deviations: 15453263369.93206
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | sum of deviations: -59505704285.67904
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | mean x: 1768006922.861413
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | mean y: 2280918.6141304346
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | intersect: 6810324929.015742
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | chi2: 18.38284453909548
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | current chi2=18.38284453909548 (change=21.740416147754715 %)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,219 | INFO     | left removable region: 10
[2026-01-09 23:10:31] 2026-01-10 04:09:48,220 | INFO     | sum of square deviations: 14108524407.450975
[2026-01-09 23:10:31] 2026-01-10 04:09:48,222 | INFO     | sum of deviations: -49709382589.37247
[2026-01-09 23:10:31] 2026-01-10 04:09:48,222 | INFO     | mean x: 1768006892.372549
[2026-01-09 23:10:31] 2026-01-10 04:09:48,222 | INFO     | mean y: 2335852.717086835
[2026-01-09 23:10:31] 2026-01-10 04:09:48,222 | INFO     | intersect: 6231657112.364906
[2026-01-09 23:10:31] 2026-01-10 04:09:48,222 | INFO     | chi2: 10.891937342965416
[2026-01-09 23:10:31] 2026-01-10 04:09:48,222 | INFO     | current memory leak: -3.52 B/s (using 357 data points, chi2=10.89)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | could have reported an average CPU frequency of 3325 MHz (16 samples)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | ..............................
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . Timing measurements:
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . get job = 0 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . initial setup = 4 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . payload setup = 24 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . stage-in = 0 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . payload execution = 22760 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . stage-out = 4 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | . log creation = 1 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,223 | INFO     | ..............................
[2026-01-09 23:10:31] 2026-01-10 04:09:48,328 | INFO     | 
[2026-01-09 23:10:31] 2026-01-10 04:09:48,329 | INFO     | job summary report
[2026-01-09 23:10:31] 2026-01-10 04:09:48,329 | INFO     | --------------------------------------------------
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | PanDA job id: 6964539349
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | task id: 47962010
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | errors: (none)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | pilot state: finished 
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | transexitcode: 0
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | exeerrorcode: 0
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | exeerrordiag: 
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | exitcode: 0
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | exitmsg: OK
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | cpuconsumptiontime: 12301 s
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | nevents: 50
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | neventsw: 0
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | pid: 2321645
[2026-01-09 23:10:31] 2026-01-10 04:09:48,330 | INFO     | pgrp: 2321645
[2026-01-09 23:10:31] 2026-01-10 04:09:48,331 | INFO     | corecount: 8
[2026-01-09 23:10:31] 2026-01-10 04:09:48,331 | INFO     | event service: False
[2026-01-09 23:10:31] 2026-01-10 04:09:48,331 | INFO     | sizes: {0: 2284398, 1: 2284597, 12: 2284597, 22: 2284625, 25: 2284915, 33: 2284943, 22788: 2320902, 22793: 2329952, 22803: 2330142}
[2026-01-09 23:10:31] 2026-01-10 04:09:48,331 | INFO     | --------------------------------------------------
[2026-01-09 23:10:31] 2026-01-10 04:09:48,331 | INFO     | 
[2026-01-09 23:10:31] 2026-01-10 04:09:48,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 23:10:31] 2026-01-10 04:09:48,369 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | job 6964539349 has completed (purged errors)
[2026-01-09 23:10:31] 2026-01-10 04:09:48,371 | INFO     | overall cleanup function is called
[2026-01-09 23:10:31] 2026-01-10 04:09:49,385 | INFO     | --- collectZombieJob: --- 10, [2321645]
[2026-01-09 23:10:31] 2026-01-10 04:09:49,385 | INFO     | zombie collector waiting for pid 2321645
[2026-01-09 23:10:31] 2026-01-10 04:09:49,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:10:31] 2026-01-10 04:09:49,386 | INFO     | collected zombie processes
[2026-01-09 23:10:31] 2026-01-10 04:09:49,386 | INFO     | will attempt to kill all subprocesses of pid=2321645
[2026-01-09 23:10:31] 2026-01-10 04:09:50,840 | INFO     | process IDs to be killed: [2321645] (in reverse order)
[2026-01-09 23:10:31] 2026-01-10 04:09:50,990 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:10:31] 2026-01-10 04:09:50,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:10:31] 2026-01-10 04:09:51,012 | INFO     | did not find any defunct processes belonging to 2321645
[2026-01-09 23:10:31] 2026-01-10 04:09:51,031 | INFO     | did not find any defunct processes belonging to 2321645
[2026-01-09 23:10:31] 2026-01-10 04:09:51,032 | INFO     | ready for new job
[2026-01-09 23:10:31] 2026-01-10 04:09:51,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:10:31] 2026-01-10 04:09:51,035 | INFO     | ***************************************
[2026-01-09 23:10:31] 2026-01-10 04:09:51,036 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:10:31] 2026-01-10 04:09:51,036 | INFO     | ***************************************
[2026-01-09 23:10:31] 2026-01-10 04:09:51,036 | INFO     | 
[2026-01-09 23:10:31] 2026-01-10 04:09:51,088 | INFO     | architecture information:
[2026-01-09 23:10:31] 2026-01-10 04:09:51,088 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:10:31] 2026-01-10 04:09:51,105 | INFO     | cat /etc/os-release:
[2026-01-09 23:10:31] NAME="CentOS Linux"
[2026-01-09 23:10:31] VERSION="7 (Core)"
[2026-01-09 23:10:31] ID="centos"
[2026-01-09 23:10:31] ID_LIKE="rhel fedora"
[2026-01-09 23:10:31] VERSION_ID="7"
[2026-01-09 23:10:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:10:31] ANSI_COLOR="0;31"
[2026-01-09 23:10:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:10:31] HOME_URL="https://www.centos.org/"
[2026-01-09 23:10:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:10:31] 
[2026-01-09 23:10:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:10:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:10:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:10:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:10:31] 
[2026-01-09 23:10:31] 2026-01-10 04:09:51,106 | INFO     | ***************************************
[2026-01-09 23:10:31] 2026-01-10 04:09:51,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 23:10:31] 2026-01-10 04:09:51,678 | INFO     | sufficient remaining disk space (72188166144 B)
[2026-01-09 23:10:31] 2026-01-10 04:09:51,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:10:31] 2026-01-10 04:09:51,679 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:10:31] 2026-01-10 04:09:51,679 | INFO     | update_server=False
[2026-01-09 23:10:31] 2026-01-10 04:09:51,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:10:31] 2026-01-10 04:09:51,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:10:31] 2026-01-10 04:09:51,740 | INFO     | all job control threads have been joined
[2026-01-09 23:10:31] 2026-01-10 04:09:51,970 | INFO     | all data control threads have been joined
[2026-01-09 23:10:31] 2026-01-10 04:09:52,029 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 23:10:31] 2026-01-10 04:09:52,029 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 23:10:31] 2026-01-10 04:09:52,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:10:31] 2026-01-10 04:09:52,030 | INFO     | will abort loop
[2026-01-09 23:10:31] 2026-01-10 04:09:52,162 | INFO     | all payload control threads have been joined
[2026-01-09 23:10:31] 2026-01-10 04:09:52,684 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:52,770 | INFO     | [job] control thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:52,976 | INFO     | [data] control thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,028 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,055 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,143 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,168 | INFO     | [payload] control thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:10:31] 2026-01-10 04:09:53,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:10:31] 2026-01-10 04:09:53,590 | INFO     | [job] validate thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,691 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,699 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,747 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,822 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:53,971 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:54,348 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:09:57,532 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:10:02,725 | INFO     | job.realtimelogging is not enabled
[2026-01-09 23:10:31] 2026-01-10 04:10:03,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:10:31] 2026-01-10 04:10:21,828 | INFO     | PID=2290943 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:10:31] 2026-01-10 04:10:21,828 | INFO     | .. there are 29 such processes running
[2026-01-09 23:10:31] 2026-01-10 04:10:21,829 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:10:31] 2026-01-10 04:10:21,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:10:31] 2026-01-10 04:10:21,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:10:31] 2026-01-10 04:10:25,558 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:10:31] 2026-01-10 04:10:25,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721342777152)>', '<ExcThread(monitor, started 139720696776448)>']
[2026-01-09 23:10:31] 2026-01-10 04:10:26,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:10:31] 2026-01-10 04:10:26,858 | INFO     | [monitor] control thread has ended
[2026-01-09 23:10:31] 2026-01-10 04:10:30,966 | INFO     | all workflow threads have been joined
[2026-01-09 23:10:31] 2026-01-10 04:10:30,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:10:31] 2026-01-10 04:10:30,967 | INFO     | traces error code: 0
[2026-01-09 23:10:31] 2026-01-10 04:10:30,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:10:31] 2026-01-10 04:10:31,168 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:10:31] 2026-01-10 04:10:31,170 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:10:31] 2026-01-10 04:10:31,172 [wrapper] pilotpid: 2290943
[2026-01-09 23:10:31] 2026-01-10 04:10:31,174 [wrapper] Pilot exit status: 0
[2026-01-09 23:10:31] 2026-01-10 04:10:31,184 [wrapper] pandaids: 6964539349
[2026-01-09 23:10:31] 2026-01-10 04:10:31,338 [wrapper] cleanup supervisor_pilot  297646 2290944
[2026-01-09 23:10:31] 2026-01-10 04:10:31,340 [wrapper] Test setup, not cleaning
[2026-01-09 23:10:31] 2026-01-10 04:10:31,343 [wrapper] apfmon messages muted
[2026-01-09 23:10:31] 2026-01-10 04:10:31,345 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:10:31] 2026-01-10 04:10:31,347 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:10:31]  *** Error codes and diagnostics ***
[2026-01-09 23:10:31]     "exeErrorCode": 0,
[2026-01-09 23:10:31]     "exeErrorDiag": "",
[2026-01-09 23:10:31]     "pilotErrorCode": 0,
[2026-01-09 23:10:31]     "pilotErrorDiag": "",
[2026-01-09 23:10:31]  *** Listing of results directory ***
[2026-01-09 23:10:31] total 442240
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 23:10:31] -rwx------. 1 boincer umatlas     36322 Jan  9 11:00 runpilot2-wrapper.sh
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 11:00 queuedata.json
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:10:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:48 run_atlas
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:48 job.xml
[2026-01-09 23:10:31] -rw-r--r--. 2 boincer umatlas 393092130 Jan  9 16:48 EVNT.47962006._000044.pool.root.1
[2026-01-09 23:10:31] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:48 start_atlas.sh
[2026-01-09 23:10:31] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:48 shared
[2026-01-09 23:10:31] -rw-r--r--. 2 boincer umatlas    592617 Jan  9 16:48 input.tar.gz
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:48 boinc_lockfile
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas      2890 Jan  9 16:48 pandaJob.out
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas        57 Jan  9 16:48 setup.sh.local
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas    989398 Jan  9 16:48 agis_schedconf.cvmfs.json
[2026-01-09 23:10:31] drwx------. 5 boincer umatlas      4096 Jan  9 16:48 pilot3
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:42 boinc_task_state.xml
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 23:00 init_data.xml
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas  46725002 Jan  9 23:09 HITS.47962010._001913.pool.root.1
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas      1044 Jan  9 23:09 memory_monitor_summary.json
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:09 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas   1431292 Jan  9 23:09 log.47962010._001913.job.log.tgz.1
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas      8548 Jan  9 23:09 heartbeat.json
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas        95 Jan  9 23:10 pilot_heartbeat.json
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas      5082 Jan  9 23:10 pilotlog.txt
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:10 wrapper_checkpoint.txt
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas   3130358 Jan  9 23:10 log.47962010._001913.job.log.1
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas       353 Jan  9 23:10 output.list
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:10 runtime_log
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas   4577280 Jan  9 23:10 result.tar.gz
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 23:10 runtime_log.err
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas       657 Jan  9 23:10 NJNODmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzfmKDmq2r9Yn.diag
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:10 boinc_mmap_file
[2026-01-09 23:10:31] -rw-r--r--. 1 boincer umatlas     21685 Jan  9 23:10 stderr.txt
[2026-01-09 23:10:31] HITS file was successfully produced:
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas 46725002 Jan  9 23:09 shared/HITS.pool.root.1
[2026-01-09 23:10:31]  *** Contents of shared directory: ***
[2026-01-09 23:10:31] total 434580
[2026-01-09 23:10:31] -rw-r--r--. 2 boincer umatlas 393092130 Jan  9 16:48 ATLAS.root_0
[2026-01-09 23:10:31] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:48 start_atlas.sh
[2026-01-09 23:10:31] -rw-r--r--. 2 boincer umatlas    592617 Jan  9 16:48 input.tar.gz
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas  46725002 Jan  9 23:09 HITS.pool.root.1
[2026-01-09 23:10:31] -rw-------. 1 boincer umatlas   4577280 Jan  9 23:10 result.tar.gz
23:10:33 (2279008): run_atlas exited; CPU time 12910.473603
23:10:33 (2279008): called boinc_finish(0)

</stderr_txt>
]]>

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