Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:40:55 (4024574): wrapper (7.7.26015): starting
13:40:55 (4024574): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:40:55] Arguments: --nthreads 8
[2026-01-09 13:40:55] Threads: 8
[2026-01-09 13:40:55] Checking for CVMFS
[2026-01-09 13:40:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:40:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:40:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:40:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:40:55] 2.11.3.0 700522 57239 219880 154957 0 261 29055751 45568001 10193 130560 0 268639829 99.771 179258459 18844 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 13:40:55] CVMFS is ok
[2026-01-09 13:40:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:40:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:40:55] Further information can be found at the LHC@home message board.
[2026-01-09 13:40:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:40:55] Checking for apptainer binary...
[2026-01-09 13:40:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:40:55] Running /usr/bin/apptainer --version
[2026-01-09 13:40:55] apptainer version 1.4.1-1.el9
[2026-01-09 13:40:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:40:56] wns0006.triumf.lcg
[2026-01-09 13:40:56] apptainer works
[2026-01-09 13:40:56] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:40:56] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:40:56] Starting ATLAS job with PandaID=6964539325
[2026-01-09 13:40:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:45:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:45:11] 2026-01-09 21:44:22,542 | WARNING  | wrong length of table data, x=[1767994887.0], y=[1579.0] (must be same and length>=4)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | ..............................
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . Timing measurements:
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . get job = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . initial setup = 2 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . payload setup = 4 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . stage-in = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . payload execution = 54 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | . stage-out = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | . log creation = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | ..............................
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964539325/pilotlog.txt
[2026-01-09 13:45:11] 2026-01-09 21:44:22,554 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 13:45:11] - Log from pilotlog.txt -
[2026-01-09 13:45:11] 2026-01-09 21:44:22,540 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6964539325/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | INFO     | extracted standard info from prmon json
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:45:11] 2026-01-09 21:44:22,542 | WARNING  | wrong length of table data, x=[1767994887.0], y=[1579.0] (must be same and length>=4)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | ..............................
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . Timing measurements:
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . get job = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . initial setup = 2 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . payload setup = 4 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . stage-in = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . payload execution = 54 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | . stage-out = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | . log creation = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | ..............................
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964539325/pilotlog.txt
[2026-01-09 13:45:11] 2026-01-09 21:44:22,554 | WARNING  | 
[2026-01-09 13:45:11] [begin log extracts]
[2026-01-09 13:45:11] - Log from pilotlog.txt -
[2026-01-09 13:45:11] 2026-01-09 21:44:22,540 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6964539325/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | INFO     | extracted standard info from prmon json
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:45:11] 2026-01-09 21:44:22,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:45:11] 2026-01-09 21:44:22,542 | WARNING  | wrong length of table data, x=[1767994887.0], y=[1579.0] (must be same and length>=4)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | ..............................
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . Timing measurements:
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . get job = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . initial setup = 2 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . payload setup = 4 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . stage-in = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,543 | INFO     | . payload execution = 54 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | . stage-out = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | . log creation = 0 s
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | ..............................
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 13:45:11] 2026-01-09 21:44:22,544 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964539325/pilotlog.txt
[2026-01-09 13:45:11] [end log extracts]
[2026-01-09 13:45:11] 2026-01-09 21:44:22,554 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 13:45:11] 2026-01-09 21:44:22,555 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 13:45:11] 2026-01-09 21:44:23,070 | INFO     | 
[2026-01-09 13:45:11] 2026-01-09 21:44:23,070 | INFO     | job summary report
[2026-01-09 13:45:11] 2026-01-09 21:44:23,070 | INFO     | --------------------------------------------------
[2026-01-09 13:45:11] 2026-01-09 21:44:23,070 | INFO     | PanDA job id: 6964539325
[2026-01-09 13:45:11] 2026-01-09 21:44:23,070 | INFO     | task id: 47962010
[2026-01-09 13:45:11] 2026-01-09 21:44:23,070 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 13:42:14,821 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | pilot state: failed 
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | transexitcode: 65
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | exeerrorcode: 65
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | exitcode: 65
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | cpuconsumptiontime: 48 s
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | nevents: 0
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | neventsw: 0
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | pid: 4035040
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | pgrp: 4035040
[2026-01-09 13:45:11] 2026-01-09 21:44:23,071 | INFO     | corecount: 8
[2026-01-09 13:45:11] 2026-01-09 21:44:23,072 | INFO     | event service: False
[2026-01-09 13:45:11] 2026-01-09 21:44:23,072 | INFO     | sizes: {0: 2283741, 1: 2284594, 4: 2284856, 12: 2284884, 62: 2310334, 63: 2314624, 64: 2314780, 183: 2315034}
[2026-01-09 13:45:11] 2026-01-09 21:44:23,072 | INFO     | --------------------------------------------------
[2026-01-09 13:45:11] 2026-01-09 21:44:23,072 | INFO     | 
[2026-01-09 13:45:11] 2026-01-09 21:44:23,072 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 13:45:11] 2026-01-09 21:44:23,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,085 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,085 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,085 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:45:11] 2026-01-09 21:44:23,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,087 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:45:11] 2026-01-09 21:44:23,087 | INFO     | job 6964539325 has completed (purged errors)
[2026-01-09 13:45:11] 2026-01-09 21:44:23,087 | INFO     | overall cleanup function is called
[2026-01-09 13:45:11] 2026-01-09 21:44:24,095 | INFO     | --- collectZombieJob: --- 10, [4035040]
[2026-01-09 13:45:11] 2026-01-09 21:44:24,095 | INFO     | zombie collector waiting for pid 4035040
[2026-01-09 13:45:11] 2026-01-09 21:44:24,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:45:11] 2026-01-09 21:44:24,095 | INFO     | collected zombie processes
[2026-01-09 13:45:11] 2026-01-09 21:44:24,096 | INFO     | will attempt to kill all subprocesses of pid=4035040
[2026-01-09 13:45:11] 2026-01-09 21:44:24,244 | INFO     | process IDs to be killed: [4035040] (in reverse order)
[2026-01-09 13:45:11] 2026-01-09 21:44:24,289 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:45:11] 2026-01-09 21:44:24,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:45:11] 2026-01-09 21:44:24,294 | INFO     | did not find any defunct processes belonging to 4035040
[2026-01-09 13:45:11] 2026-01-09 21:44:24,299 | INFO     | did not find any defunct processes belonging to 4035040
[2026-01-09 13:45:11] 2026-01-09 21:44:24,299 | INFO     | ready for new job
[2026-01-09 13:45:11] 2026-01-09 21:44:24,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:45:11] 2026-01-09 21:44:24,301 | INFO     | ***************************************
[2026-01-09 13:45:11] 2026-01-09 21:44:24,301 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:45:11] 2026-01-09 21:44:24,301 | INFO     | ***************************************
[2026-01-09 13:45:11] 2026-01-09 21:44:24,301 | INFO     | 
[2026-01-09 13:45:11] 2026-01-09 21:44:24,302 | INFO     | architecture information:
[2026-01-09 13:45:11] 2026-01-09 21:44:24,303 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:45:11] 2026-01-09 21:44:24,312 | INFO     | cat /etc/os-release:
[2026-01-09 13:45:11] NAME="CentOS Linux"
[2026-01-09 13:45:11] VERSION="7 (Core)"
[2026-01-09 13:45:11] ID="centos"
[2026-01-09 13:45:11] ID_LIKE="rhel fedora"
[2026-01-09 13:45:11] VERSION_ID="7"
[2026-01-09 13:45:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:45:11] ANSI_COLOR="0;31"
[2026-01-09 13:45:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:45:11] HOME_URL="https://www.centos.org/"
[2026-01-09 13:45:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:45:11] 
[2026-01-09 13:45:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:45:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:45:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:45:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:45:11] 
[2026-01-09 13:45:11] 2026-01-09 21:44:24,313 | INFO     | ***************************************
[2026-01-09 13:45:11] 2026-01-09 21:44:24,816 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 13:45:11] 2026-01-09 21:44:24,827 | INFO     | sufficient remaining disk space (1412223205376 B)
[2026-01-09 13:45:11] 2026-01-09 21:44:24,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:45:11] 2026-01-09 21:44:24,827 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:45:11] 2026-01-09 21:44:24,828 | INFO     | update_server=False
[2026-01-09 13:45:11] 2026-01-09 21:44:24,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:45:11] 2026-01-09 21:44:24,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:45:11] 2026-01-09 21:44:24,828 | INFO     | aborting loop
[2026-01-09 13:45:11] 2026-01-09 21:44:24,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:45:11] 2026-01-09 21:44:25,180 | INFO     | all data control threads have been joined
[2026-01-09 13:45:11] 2026-01-09 21:44:25,724 | INFO     | all job control threads have been joined
[2026-01-09 13:45:11] 2026-01-09 21:44:25,833 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:25,834 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:25,959 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:26,039 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:26,064 | INFO     | all payload control threads have been joined
[2026-01-09 13:45:11] 2026-01-09 21:44:26,182 | INFO     | [data] control thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:26,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:45:11] 2026-01-09 21:44:26,369 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:26,728 | INFO     | [job] control thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:26,990 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,048 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,070 | INFO     | [payload] control thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,118 | INFO     | [job] validate thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,204 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,318 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:27,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:45:11] 2026-01-09 21:44:28,637 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:30,285 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:45:11] 2026-01-09 21:44:54,404 | INFO     | PID=4028222 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 13:45:11] 2026-01-09 21:44:54,405 | INFO     | .. there are 13 such processes running
[2026-01-09 13:45:11] 2026-01-09 21:44:54,405 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:45:11] 2026-01-09 21:44:54,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:45:11] 2026-01-09 21:44:54,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:45:11] 2026-01-09 21:45:04,417 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:45:11] 2026-01-09 21:45:06,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080205129536)>', '<ExcThread(monitor, started 140079670482688)>']
[2026-01-09 13:45:11] 2026-01-09 21:45:06,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:45:11] 2026-01-09 21:45:06,463 | INFO     | [monitor] control thread has ended
[2026-01-09 13:45:11] 2026-01-09 21:45:11,129 | INFO     | all workflow threads have been joined
[2026-01-09 13:45:11] 2026-01-09 21:45:11,129 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:45:11] 2026-01-09 21:45:11,130 | INFO     | traces error code: 0
[2026-01-09 13:45:11] 2026-01-09 21:45:11,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:45:11] 2026-01-09 21:45:11,223 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:45:11] 2026-01-09 21:45:11,225 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:45:11] 2026-01-09 21:45:11,227 [wrapper] pilotpid: 4028222
[2026-01-09 13:45:11] 2026-01-09 21:45:11,229 [wrapper] Pilot exit status: 0
[2026-01-09 13:45:11] 2026-01-09 21:45:11,236 [wrapper] pandaids: 6964539325
[2026-01-09 13:45:11] 2026-01-09 21:45:11,264 [wrapper] cleanup supervisor_pilot 4028228 4028223
[2026-01-09 13:45:11] 2026-01-09 21:45:11,266 [wrapper] Test setup, not cleaning
[2026-01-09 13:45:11] 2026-01-09 21:45:11,268 [wrapper] apfmon messages muted
[2026-01-09 13:45:11] 2026-01-09 21:45:11,270 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:45:11] 2026-01-09 21:45:11,272 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:45:11]  *** Error codes and diagnostics ***
[2026-01-09 13:45:11]     "exeErrorCode": 65,
[2026-01-09 13:45:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 13:45:11]     "pilotErrorCode": 1305,
[2026-01-09 13:45:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 13:45:11]  *** Listing of results directory ***
[2026-01-09 13:45:11] total 387876
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc    579449 Jan  9 07:55 pilot3.tar.gz
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc      5112 Jan  9 07:59 queuedata.json
[2026-01-09 13:45:11] -rwx------. 1 boinc boinc     36322 Jan  9 08:00 runpilot2-wrapper.sh
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc       100 Jan  9 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:45:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 13:40 run_atlas
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc       105 Jan  9 13:40 job.xml
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc      6444 Jan  9 13:40 init_data.xml
[2026-01-09 13:45:11] -rw-r--r--. 2 boinc boinc 392998403 Jan  9 13:40 EVNT.47962006._000042.pool.root.1
[2026-01-09 13:45:11] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:40 start_atlas.sh
[2026-01-09 13:45:11] drwxrwx--x. 2 boinc boinc      4096 Jan  9 13:40 shared
[2026-01-09 13:45:11] -rw-r--r--. 2 boinc boinc    592617 Jan  9 13:40 input.tar.gz
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc         0 Jan  9 13:40 boinc_lockfile
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc      2890 Jan  9 13:40 pandaJob.out
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc    989398 Jan  9 13:41 agis_schedconf.cvmfs.json
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc   1516240 Jan  9 13:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:45:11] drwx------. 5 boinc boinc      4096 Jan  9 13:41 pilot3
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc       524 Jan  9 13:42 boinc_task_state.xml
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc       943 Jan  9 13:42 memory_monitor_summary.json
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc     48254 Jan  9 13:42 log.47962010._001889.job.log.tgz.1
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc        95 Jan  9 13:44 pilot_heartbeat.json
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc     10313 Jan  9 13:44 heartbeat.json
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:45 boinc_mmap_file
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc        23 Jan  9 13:45 wrapper_checkpoint.txt
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc      4823 Jan  9 13:45 pilotlog.txt
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc     89884 Jan  9 13:45 log.47962010._001889.job.log.1
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc       186 Jan  9 13:45 output.list
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:45 runtime_log
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc    163840 Jan  9 13:45 result.tar.gz
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc      8634 Jan  9 13:45 runtime_log.err
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc       645 Jan  9 13:45 MgiMDmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdfmKDm0mgZXo.diag
[2026-01-09 13:45:11] -rw-r--r--. 1 boinc boinc     22278 Jan  9 13:45 stderr.txt
[2026-01-09 13:45:11] No HITS result produced
[2026-01-09 13:45:11]  *** Contents of shared directory: ***
[2026-01-09 13:45:11] total 384544
[2026-01-09 13:45:11] -rw-r--r--. 2 boinc boinc 392998403 Jan  9 13:40 ATLAS.root_0
[2026-01-09 13:45:11] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:40 start_atlas.sh
[2026-01-09 13:45:11] -rw-r--r--. 2 boinc boinc    592617 Jan  9 13:40 input.tar.gz
[2026-01-09 13:45:11] -rw-------. 1 boinc boinc    163840 Jan  9 13:45 result.tar.gz
13:45:12 (4024574): run_atlas exited; CPU time 47.187200
13:45:12 (4024574): called boinc_finish(0)

</stderr_txt>
]]>

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