Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:25 (3972021): wrapper (7.7.26015): starting
18:43:25 (3972021): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 18:43:25] Arguments: --nthreads 9
[2026-01-09 18:43:25] Threads: 9
[2026-01-09 18:43:25] Checking for CVMFS
[2026-01-09 18:43:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:43:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:43:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:43:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:43:26] 2.13.3.0 3884235 17613 165564 154961 3 108 40049340 40960001 14273 16776704 0 19825921 99.551 23863660 43950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:43:26] CVMFS is ok
[2026-01-09 18:43:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:43:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:43:26] Further information can be found at the LHC@home message board.
[2026-01-09 18:43:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:43:26] Checking for apptainer binary...
[2026-01-09 18:43:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:43:26] Running /usr/bin/apptainer --version
[2026-01-09 18:43:26] apptainer version 1.4.5-2.el9
[2026-01-09 18:43:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:43:47] c-206-35.aglt2.org
[2026-01-09 18:43:47] apptainer works
[2026-01-09 18:43:47] Set ATHENA_PROC_NUMBER=9
[2026-01-09 18:43:47] Set ATHENA_CORE_NUMBER=9
[2026-01-09 18:43:47] Starting ATLAS job with PandaID=6964539404
[2026-01-09 18:43:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:56:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:56:54] 2026-01-10 02:56:13,204 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:56:54] 2026-01-10 02:56:13,204 | INFO     | job 6964539404 has finished - writing final server update
[2026-01-09 21:56:54] 2026-01-10 02:56:13,204 | INFO     | total number of processed events: 50 (read)
[2026-01-09 21:56:54] 2026-01-10 02:56:13,206 | INFO     | executing command: lscpu
[2026-01-09 21:56:54] 2026-01-10 02:56:13,252 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:56:54] 2026-01-10 02:56:13,360 | INFO     | monitor loop #846: job 0:6964539404 is in state 'finished'
[2026-01-09 21:56:54] 2026-01-10 02:56:13,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:56:54] 2026-01-10 02:56:13,512 | INFO     | time since job start (11515s) is within the limit (349056.0s)
[2026-01-09 21:56:54] 2026-01-10 02:56:15,519 | INFO     | time since job start (11517s) is within the limit (349056.0s)
[2026-01-09 21:56:54] 2026-01-10 02:56:15,864 | INFO     | monitor loop #847: job 0:6964539404 is in state 'finished'
[2026-01-09 21:56:54] 2026-01-10 02:56:15,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:56:54] 2026-01-10 02:56:17,526 | INFO     | time since job start (11519s) is within the limit (349056.0s)
[2026-01-09 21:56:54] 2026-01-10 02:56:18,369 | INFO     | monitor loop #848: job 0:6964539404 is in state 'finished'
[2026-01-09 21:56:54] 2026-01-10 02:56:18,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:56:54] 2026-01-10 02:56:19,533 | INFO     | time since job start (11521s) is within the limit (349056.0s)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,831 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:56:54] 2026-01-10 02:56:20,838 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3263.1483593750004
[2026-01-09 21:56:54] 2026-01-10 02:56:20,850 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6964539404/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,851 | INFO     | extracted standard info from prmon json
[2026-01-09 21:56:54] 2026-01-10 02:56:20,851 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:56:54] 2026-01-10 02:56:20,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:56:54] 2026-01-10 02:56:20,854 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:56:54] 2026-01-10 02:56:20,854 | INFO     | sum of square deviations: 2060343056.7021267
[2026-01-09 21:56:54] 2026-01-10 02:56:20,855 | INFO     | sum of deviations: 129324708553.70229
[2026-01-09 21:56:54] 2026-01-10 02:56:20,855 | INFO     | mean x: 1768008028.7340426
[2026-01-09 21:56:54] 2026-01-10 02:56:20,855 | INFO     | mean y: 2293442.234042553
[2026-01-09 21:56:54] 2026-01-10 02:56:20,855 | INFO     | intersect: -110972974629.19972
[2026-01-09 21:56:54] 2026-01-10 02:56:20,856 | INFO     | chi2: 16.401022216228405
[2026-01-09 21:56:54] 2026-01-10 02:56:20,856 | INFO     | sum of square deviations: 1900297661.420763
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | sum of deviations: 177679597117.2241
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | mean x: 1768007876.2404373
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | mean y: 2339542.699453552
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | intersect: -165308039735.25693
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | chi2: 12.688039266217714
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | current chi2=12.688039266217714 (change=22.63872886128272 %)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,857 | INFO     | right removable region: 182
[2026-01-09 21:56:54] 2026-01-10 02:56:20,858 | INFO     | sum of square deviations: 1900270821.420763
[2026-01-09 21:56:54] 2026-01-10 02:56:20,858 | INFO     | sum of deviations: 78383738625.75406
[2026-01-09 21:56:54] 2026-01-10 02:56:20,858 | INFO     | mean x: 1768008181.2404373
[2026-01-09 21:56:54] 2026-01-10 02:56:20,858 | INFO     | mean y: 2341896.573770492
[2026-01-09 21:56:54] 2026-01-10 02:56:20,859 | INFO     | intersect: -72925732146.54169
[2026-01-09 21:56:54] 2026-01-10 02:56:20,859 | INFO     | chi2: 13.154269302535477
[2026-01-09 21:56:54] 2026-01-10 02:56:20,859 | INFO     | current chi2=13.154269302535477 (change=19.796039971705827 %)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,859 | INFO     | left removable region: 10
[2026-01-09 21:56:54] 2026-01-10 02:56:20,859 | INFO     | sum of square deviations: 1577778155.744191
[2026-01-09 21:56:54] 2026-01-10 02:56:20,860 | INFO     | sum of deviations: 87360805048.53487
[2026-01-09 21:56:54] 2026-01-10 02:56:20,860 | INFO     | mean x: 1768008150.7558138
[2026-01-09 21:56:54] 2026-01-10 02:56:20,860 | INFO     | mean y: 2452179.965116279
[2026-01-09 21:56:54] 2026-01-10 02:56:20,860 | INFO     | intersect: -97891294681.77138
[2026-01-09 21:56:54] 2026-01-10 02:56:20,860 | INFO     | chi2: 6.064636120441293
[2026-01-09 21:56:54] 2026-01-10 02:56:20,860 | INFO     | current memory leak: 55.37 B/s (using 172 data points, chi2=6.06)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | could have reported an average CPU frequency of 3254 MHz (10 samples)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | ..............................
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . Timing measurements:
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . get job = 0 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . initial setup = 2 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . payload setup = 18 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . stage-in = 0 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . payload execution = 11452 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,861 | INFO     | . stage-out = 2 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,862 | INFO     | . log creation = 0 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,862 | INFO     | ..............................
[2026-01-09 21:56:54] 2026-01-10 02:56:20,937 | INFO     | 
[2026-01-09 21:56:54] 2026-01-10 02:56:20,937 | INFO     | job summary report
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | --------------------------------------------------
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | PanDA job id: 6964539404
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | task id: 47962010
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | errors: (none)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | pilot state: finished 
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | transexitcode: 0
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | exeerrorcode: 0
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | exeerrordiag: 
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | exitcode: 0
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | exitmsg: OK
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | cpuconsumptiontime: 12053 s
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | nevents: 50
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | neventsw: 0
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | pid: 3984145
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | pgrp: 3984145
[2026-01-09 21:56:54] 2026-01-10 02:56:20,938 | INFO     | corecount: 9
[2026-01-09 21:56:54] 2026-01-10 02:56:20,939 | INFO     | event service: False
[2026-01-09 21:56:54] 2026-01-10 02:56:20,939 | INFO     | sizes: {0: 2284342, 1: 2284597, 12: 2284597, 16: 2284887, 22: 2284915, 11475: 2315112, 11478: 2324106, 11480: 2324162, 11487: 2324408}
[2026-01-09 21:56:54] 2026-01-10 02:56:20,939 | INFO     | --------------------------------------------------
[2026-01-09 21:56:54] 2026-01-10 02:56:20,939 | INFO     | 
[2026-01-09 21:56:54] 2026-01-10 02:56:20,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | job 6964539404 has completed (purged errors)
[2026-01-09 21:56:54] 2026-01-10 02:56:20,980 | INFO     | overall cleanup function is called
[2026-01-09 21:56:54] 2026-01-10 02:56:21,996 | INFO     | --- collectZombieJob: --- 10, [3984145]
[2026-01-09 21:56:54] 2026-01-10 02:56:21,996 | INFO     | zombie collector waiting for pid 3984145
[2026-01-09 21:56:54] 2026-01-10 02:56:21,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:56:54] 2026-01-10 02:56:21,997 | INFO     | collected zombie processes
[2026-01-09 21:56:54] 2026-01-10 02:56:21,997 | INFO     | will attempt to kill all subprocesses of pid=3984145
[2026-01-09 21:56:54] 2026-01-10 02:56:22,436 | INFO     | process IDs to be killed: [3984145] (in reverse order)
[2026-01-09 21:56:54] 2026-01-10 02:56:22,549 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:56:54] 2026-01-10 02:56:22,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:56:54] 2026-01-10 02:56:22,560 | INFO     | did not find any defunct processes belonging to 3984145
[2026-01-09 21:56:54] 2026-01-10 02:56:22,569 | INFO     | did not find any defunct processes belonging to 3984145
[2026-01-09 21:56:54] 2026-01-10 02:56:22,569 | INFO     | ready for new job
[2026-01-09 21:56:54] 2026-01-10 02:56:22,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:56:54] 2026-01-10 02:56:22,571 | INFO     | ***************************************
[2026-01-09 21:56:54] 2026-01-10 02:56:22,571 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:56:54] 2026-01-10 02:56:22,571 | INFO     | ***************************************
[2026-01-09 21:56:54] 2026-01-10 02:56:22,571 | INFO     | 
[2026-01-09 21:56:54] 2026-01-10 02:56:22,574 | INFO     | architecture information:
[2026-01-09 21:56:54] 2026-01-10 02:56:22,575 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:56:54] 2026-01-10 02:56:22,596 | INFO     | cat /etc/os-release:
[2026-01-09 21:56:54] NAME="CentOS Linux"
[2026-01-09 21:56:54] VERSION="7 (Core)"
[2026-01-09 21:56:54] ID="centos"
[2026-01-09 21:56:54] ID_LIKE="rhel fedora"
[2026-01-09 21:56:54] VERSION_ID="7"
[2026-01-09 21:56:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:56:54] ANSI_COLOR="0;31"
[2026-01-09 21:56:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:56:54] HOME_URL="https://www.centos.org/"
[2026-01-09 21:56:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:56:54] 
[2026-01-09 21:56:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:56:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:56:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:56:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:56:54] 
[2026-01-09 21:56:54] 2026-01-10 02:56:22,597 | INFO     | ***************************************
[2026-01-09 21:56:54] 2026-01-10 02:56:23,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 21:56:54] 2026-01-10 02:56:23,317 | INFO     | sufficient remaining disk space (84157661184 B)
[2026-01-09 21:56:54] 2026-01-10 02:56:23,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:56:54] 2026-01-10 02:56:23,318 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:56:54] 2026-01-10 02:56:23,318 | INFO     | update_server=False
[2026-01-09 21:56:54] 2026-01-10 02:56:23,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:56:54] 2026-01-10 02:56:23,395 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 21:56:54] 2026-01-10 02:56:23,395 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 21:56:54] 2026-01-10 02:56:23,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:56:54] 2026-01-10 02:56:23,396 | INFO     | will abort loop
[2026-01-09 21:56:54] 2026-01-10 02:56:23,515 | INFO     | all payload control threads have been joined
[2026-01-09 21:56:54] 2026-01-10 02:56:23,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:56:54] 2026-01-10 02:56:24,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:56:54] 2026-01-10 02:56:24,334 | INFO     | all data control threads have been joined
[2026-01-09 21:56:54] 2026-01-10 02:56:24,337 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:24,369 | INFO     | all job control threads have been joined
[2026-01-09 21:56:54] 2026-01-10 02:56:24,394 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:24,406 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:24,521 | INFO     | [payload] control thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:24,607 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:24,664 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,192 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,300 | INFO     | [job] validate thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,340 | INFO     | [data] control thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,375 | INFO     | [job] control thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,528 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,759 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:25,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:56:54] 2026-01-10 02:56:26,222 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:26,965 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:27,736 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:34,343 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:56:54] 2026-01-10 02:56:35,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:56:54] 2026-01-10 02:56:37,657 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:56:54] 2026-01-10 02:56:39,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071814825792)>', '<ExcThread(monitor, started 140071458023168)>']
[2026-01-09 21:56:54] 2026-01-10 02:56:44,327 | INFO     | all workflow threads have been joined
[2026-01-09 21:56:54] 2026-01-10 02:56:44,327 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:56:54] 2026-01-10 02:56:44,328 | INFO     | traces error code: 0
[2026-01-09 21:56:54] 2026-01-10 02:56:44,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:56:54] 2026-01-10 02:56:52,938 | INFO     | PID=3977226 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:56:54] 2026-01-10 02:56:52,938 | INFO     | .. there are 11 such processes running
[2026-01-09 21:56:54] 2026-01-10 02:56:52,939 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:56:54] 2026-01-10 02:56:52,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:56:54] 2026-01-10 02:56:52,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:56:54] 2026-01-10 02:56:52,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:56:54] 2026-01-10 02:56:52,939 | INFO     | [monitor] control thread has ended
[2026-01-09 21:56:54] 2026-01-10 02:56:53,030 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:56:54] 2026-01-10 02:56:53,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:56:54] 2026-01-10 02:56:53,041 [wrapper] pilotpid: 3977226
[2026-01-09 21:56:54] 2026-01-10 02:56:53,062 [wrapper] Pilot exit status: 0
[2026-01-09 21:56:54] 2026-01-10 02:56:53,085 [wrapper] pandaids: 6964539404
[2026-01-09 21:56:54] 2026-01-10 02:56:53,171 [wrapper] cleanup supervisor_pilot   98160 3977227
[2026-01-09 21:56:54] 2026-01-10 02:56:53,204 [wrapper] Test setup, not cleaning
[2026-01-09 21:56:54] 2026-01-10 02:56:53,216 [wrapper] apfmon messages muted
[2026-01-09 21:56:54] 2026-01-10 02:56:53,251 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:56:54] 2026-01-10 02:56:53,301 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:56:54]  *** Error codes and diagnostics ***
[2026-01-09 21:56:54]     "exeErrorCode": 0,
[2026-01-09 21:56:54]     "exeErrorDiag": "",
[2026-01-09 21:56:54]     "pilotErrorCode": 0,
[2026-01-09 21:56:54]     "pilotErrorDiag": "",
[2026-01-09 21:56:54]  *** Listing of results directory ***
[2026-01-09 21:56:54] total 434020
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 21:56:54] -rwx------. 1 boincer umatlas     36322 Jan  9 11:00 runpilot2-wrapper.sh
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 11:00 queuedata.json
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:56:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:43 run_atlas
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:43 job.xml
[2026-01-09 21:56:54] -rw-r--r--. 2 boincer umatlas 391230903 Jan  9 18:43 EVNT.47962006._000048.pool.root.1
[2026-01-09 21:56:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:43 start_atlas.sh
[2026-01-09 21:56:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:43 shared
[2026-01-09 21:56:54] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 18:43 input.tar.gz
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:43 boinc_lockfile
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas      2890 Jan  9 18:43 pandaJob.out
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas        57 Jan  9 18:43 setup.sh.local
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas    989374 Jan  9 18:44 agis_schedconf.cvmfs.json
[2026-01-09 21:56:54] drwx------. 5 boincer umatlas      4096 Jan  9 18:44 pilot3
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:38 boinc_task_state.xml
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas      6907 Jan  9 21:49 init_data.xml
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas  43159399 Jan  9 21:55 HITS.47962010._001968.pool.root.1
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas      1031 Jan  9 21:56 memory_monitor_summary.json
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas   1409645 Jan  9 21:56 log.47962010._001968.job.log.tgz.1
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas      8551 Jan  9 21:56 heartbeat.json
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:56 wrapper_checkpoint.txt
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:56 boinc_mmap_file
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas        95 Jan  9 21:56 pilot_heartbeat.json
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas       823 Jan  9 21:56 pilotlog.txt
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas   1653996 Jan  9 21:56 log.47962010._001968.job.log.1
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas       353 Jan  9 21:56 output.list
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:56 runtime_log
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas   3082240 Jan  9 21:56 result.tar.gz
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas       655 Jan  9 21:56 V05LDmS5Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwThKDmazQBln.diag
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 21:56 runtime_log.err
[2026-01-09 21:56:54] -rw-r--r--. 1 boincer umatlas     21629 Jan  9 21:56 stderr.txt
[2026-01-09 21:56:54] HITS file was successfully produced:
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas 43159399 Jan  9 21:55 shared/HITS.pool.root.1
[2026-01-09 21:56:54]  *** Contents of shared directory: ***
[2026-01-09 21:56:54] total 427828
[2026-01-09 21:56:54] -rw-r--r--. 2 boincer umatlas 391230903 Jan  9 18:43 ATLAS.root_0
[2026-01-09 21:56:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:43 start_atlas.sh
[2026-01-09 21:56:54] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 18:43 input.tar.gz
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas  43159399 Jan  9 21:55 HITS.pool.root.1
[2026-01-09 21:56:54] -rw-------. 1 boincer umatlas   3082240 Jan  9 21:56 result.tar.gz
21:56:56 (3972021): run_atlas exited; CPU time 12040.478118
21:56:56 (3972021): called boinc_finish(0)

</stderr_txt>
]]>

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