Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:10 (4104895): wrapper (7.7.26015): starting
18:12:10 (4104895): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:12:10] Arguments: --nthreads 8
[2026-01-09 18:12:10] Threads: 8
[2026-01-09 18:12:10] Checking for CVMFS
[2026-01-09 18:12:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:12:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:12:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:12:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:12:11] 2.13.3.0 11379 94054 330872 154960 1 65 32393972 32935937 15498 16776704 0 327512190 99.399 528218513 39707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:12:11] CVMFS is ok
[2026-01-09 18:12:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:12:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:12:11] Further information can be found at the LHC@home message board.
[2026-01-09 18:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:12:11] Checking for apptainer binary...
[2026-01-09 18:12:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:12:11] Running /usr/bin/apptainer --version
[2026-01-09 18:12:11] apptainer version 1.4.5-2.el9
[2026-01-09 18:12:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:12:11] c6-4-5-1.aglt2.org
[2026-01-09 18:12:11] apptainer works
[2026-01-09 18:12:11] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:12:11] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:12:11] Starting ATLAS job with PandaID=6964539161
[2026-01-09 18:12:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:29:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:29:19] 2026-01-10 02:28:39,727 | INFO     | PID=4109479 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:29:19] 2026-01-10 02:28:39,727 | INFO     | .. there are 17 such processes running
[2026-01-09 21:29:19] 2026-01-10 02:28:40,731 | INFO     | time since job start (11768s) is within the limit (349056.0s)
[2026-01-09 21:29:19] 2026-01-10 02:28:41,308 | INFO     | monitor loop #771: job 0:6964539161 is in state 'finished'
[2026-01-09 21:29:19] 2026-01-10 02:28:41,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:19] 2026-01-10 02:28:42,738 | INFO     | time since job start (11770s) is within the limit (349056.0s)
[2026-01-09 21:29:19] 2026-01-10 02:28:43,814 | INFO     | monitor loop #772: job 0:6964539161 is in state 'finished'
[2026-01-09 21:29:19] 2026-01-10 02:28:43,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:19] 2026-01-10 02:28:44,745 | INFO     | time since job start (11772s) is within the limit (349056.0s)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,587 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:29:19] 2026-01-10 02:28:45,592 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2955.6938593749996
[2026-01-09 21:29:19] 2026-01-10 02:28:45,640 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539161/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,640 | INFO     | extracted standard info from prmon json
[2026-01-09 21:29:19] 2026-01-10 02:28:45,641 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:29:19] 2026-01-10 02:28:45,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:29:19] 2026-01-10 02:28:45,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:29:19] 2026-01-10 02:28:45,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:29:19] 2026-01-10 02:28:45,657 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:29:19] 2026-01-10 02:28:45,657 | INFO     | sum of square deviations: 2194858785.9166737
[2026-01-09 21:29:19] 2026-01-10 02:28:45,658 | INFO     | sum of deviations: -52283267348.187485
[2026-01-09 21:29:19] 2026-01-10 02:28:45,658 | INFO     | mean x: 1768006222.3541667
[2026-01-09 21:29:19] 2026-01-10 02:28:45,658 | INFO     | mean y: 2611730.546875
[2026-01-09 21:29:19] 2026-01-10 02:28:45,659 | INFO     | intersect: 42117914359.45651
[2026-01-09 21:29:19] 2026-01-10 02:28:45,659 | INFO     | chi2: 1.8357579590579953
[2026-01-09 21:29:19] 2026-01-10 02:28:45,659 | INFO     | sum of square deviations: 2027838464.3850245
[2026-01-09 21:29:19] 2026-01-10 02:28:45,660 | INFO     | sum of deviations: -49715739571.048134
[2026-01-09 21:29:19] 2026-01-10 02:28:45,679 | INFO     | mean x: 1768006069.8609626
[2026-01-09 21:29:19] 2026-01-10 02:28:45,679 | INFO     | mean y: 2614075.2673796793
[2026-01-09 21:29:19] 2026-01-10 02:28:45,679 | INFO     | intersect: 43348142268.459236
[2026-01-09 21:29:19] 2026-01-10 02:28:45,679 | INFO     | chi2: 1.830675999638683
[2026-01-09 21:29:19] 2026-01-10 02:28:45,679 | INFO     | current chi2=1.830675999638683 (change=0.27683167022302324 %)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,680 | INFO     | right removable region: 186
[2026-01-09 21:29:19] 2026-01-10 02:28:45,680 | INFO     | sum of square deviations: 2027773072.171118
[2026-01-09 21:29:19] 2026-01-10 02:28:45,681 | INFO     | sum of deviations: -81063286911.42242
[2026-01-09 21:29:19] 2026-01-10 02:28:45,681 | INFO     | mean x: 1768006374.8770053
[2026-01-09 21:29:19] 2026-01-10 02:28:45,681 | INFO     | mean y: 2637661.4598930483
[2026-01-09 21:29:19] 2026-01-10 02:28:45,681 | INFO     | intersect: 70681359060.2142
[2026-01-09 21:29:19] 2026-01-10 02:28:45,681 | INFO     | chi2: 0.3398861678622457
[2026-01-09 21:29:19] 2026-01-10 02:28:45,681 | INFO     | current chi2=0.3398861678622457 (change=81.48524067755339 %)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,682 | INFO     | sum of square deviations: 1869396359.5164826
[2026-01-09 21:29:19] 2026-01-10 02:28:45,685 | INFO     | sum of deviations: -78459939762.87909
[2026-01-09 21:29:19] 2026-01-10 02:28:45,685 | INFO     | mean x: 1768006527.3956044
[2026-01-09 21:29:19] 2026-01-10 02:28:45,685 | INFO     | mean y: 2635104.901098901
[2026-01-09 21:29:19] 2026-01-10 02:28:45,685 | INFO     | intersect: 74207169062.4377
[2026-01-09 21:29:19] 2026-01-10 02:28:45,685 | INFO     | chi2: 0.31795782701368674
[2026-01-09 21:29:19] 2026-01-10 02:28:45,685 | INFO     | current chi2=0.31795782701368674 (change=6.451672036693883 %)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,686 | INFO     | left removable region: 20
[2026-01-09 21:29:19] 2026-01-10 02:28:45,686 | INFO     | sum of square deviations: 1418450008.6325338
[2026-01-09 21:29:19] 2026-01-10 02:28:45,687 | INFO     | sum of deviations: -61849485100.07229
[2026-01-09 21:29:19] 2026-01-10 02:28:45,688 | INFO     | mean x: 1768006649.4277108
[2026-01-09 21:29:19] 2026-01-10 02:28:45,689 | INFO     | mean y: 2624377.493975904
[2026-01-09 21:29:19] 2026-01-10 02:28:45,689 | INFO     | intersect: 77094027144.67912
[2026-01-09 21:29:19] 2026-01-10 02:28:45,689 | INFO     | chi2: 0.3042161367278143
[2026-01-09 21:29:19] 2026-01-10 02:28:45,689 | INFO     | current memory leak: -43.60 B/s (using 166 data points, chi2=0.30)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,690 | INFO     | could have reported an average CPU frequency of 2991 MHz (10 samples)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,690 | INFO     | ..............................
[2026-01-09 21:29:19] 2026-01-10 02:28:45,690 | INFO     | . Timing measurements:
[2026-01-09 21:29:19] 2026-01-10 02:28:45,690 | INFO     | . get job = 0 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,690 | INFO     | . initial setup = 2 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,690 | INFO     | . payload setup = 14 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,691 | INFO     | . stage-in = 0 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,691 | INFO     | . payload execution = 11718 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,691 | INFO     | . stage-out = 3 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,691 | INFO     | . log creation = 0 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,691 | INFO     | ..............................
[2026-01-09 21:29:19] 2026-01-10 02:28:45,812 | INFO     | 
[2026-01-09 21:29:19] 2026-01-10 02:28:45,812 | INFO     | job summary report
[2026-01-09 21:29:19] 2026-01-10 02:28:45,812 | INFO     | --------------------------------------------------
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | PanDA job id: 6964539161
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | task id: 47898826
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | errors: (none)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | pilot state: finished 
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | transexitcode: 0
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | exeerrorcode: 0
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | exeerrordiag: 
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | exitcode: 0
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | exitmsg: OK
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | cpuconsumptiontime: 54673 s
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | nevents: 400
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | neventsw: 0
[2026-01-09 21:29:19] 2026-01-10 02:28:45,813 | INFO     | pid: 4116826
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | pgrp: 4116826
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | corecount: 8
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | event service: False
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | sizes: {0: 2283092, 1: 2283948, 2: 2283948, 11: 2284238, 13: 2284266, 11736: 2314044, 11737: 2314171, 11741: 2323281, 11753: 2323419}
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | --------------------------------------------------
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | 
[2026-01-09 21:29:19] 2026-01-10 02:28:45,814 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | job 6964539161 has completed (purged errors)
[2026-01-09 21:29:19] 2026-01-10 02:28:45,918 | INFO     | overall cleanup function is called
[2026-01-09 21:29:19] 2026-01-10 02:28:46,943 | INFO     | --- collectZombieJob: --- 10, [4116826]
[2026-01-09 21:29:19] 2026-01-10 02:28:46,944 | INFO     | zombie collector waiting for pid 4116826
[2026-01-09 21:29:19] 2026-01-10 02:28:46,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:29:19] 2026-01-10 02:28:46,944 | INFO     | collected zombie processes
[2026-01-09 21:29:19] 2026-01-10 02:28:46,944 | INFO     | will attempt to kill all subprocesses of pid=4116826
[2026-01-09 21:29:19] 2026-01-10 02:28:47,265 | INFO     | process IDs to be killed: [4116826] (in reverse order)
[2026-01-09 21:29:19] 2026-01-10 02:28:47,378 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:29:19] 2026-01-10 02:28:47,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:29:19] 2026-01-10 02:28:47,391 | INFO     | did not find any defunct processes belonging to 4116826
[2026-01-09 21:29:19] 2026-01-10 02:28:47,402 | INFO     | did not find any defunct processes belonging to 4116826
[2026-01-09 21:29:19] 2026-01-10 02:28:47,403 | INFO     | ready for new job
[2026-01-09 21:29:19] 2026-01-10 02:28:47,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:29:19] 2026-01-10 02:28:47,404 | INFO     | ***************************************
[2026-01-09 21:29:19] 2026-01-10 02:28:47,406 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:29:19] 2026-01-10 02:28:47,406 | INFO     | ***************************************
[2026-01-09 21:29:19] 2026-01-10 02:28:47,406 | INFO     | 
[2026-01-09 21:29:19] 2026-01-10 02:28:47,409 | INFO     | architecture information:
[2026-01-09 21:29:19] 2026-01-10 02:28:47,410 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:29:19] 2026-01-10 02:28:47,428 | INFO     | cat /etc/os-release:
[2026-01-09 21:29:19] NAME="CentOS Linux"
[2026-01-09 21:29:19] VERSION="7 (Core)"
[2026-01-09 21:29:19] ID="centos"
[2026-01-09 21:29:19] ID_LIKE="rhel fedora"
[2026-01-09 21:29:19] VERSION_ID="7"
[2026-01-09 21:29:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:29:19] ANSI_COLOR="0;31"
[2026-01-09 21:29:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:29:19] HOME_URL="https://www.centos.org/"
[2026-01-09 21:29:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:29:19] 
[2026-01-09 21:29:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:29:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:29:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:29:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:29:19] 
[2026-01-09 21:29:19] 2026-01-10 02:28:47,428 | INFO     | ***************************************
[2026-01-09 21:29:19] 2026-01-10 02:28:47,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:29:19] 2026-01-10 02:28:47,986 | INFO     | sufficient remaining disk space (75073847296 B)
[2026-01-09 21:29:19] 2026-01-10 02:28:47,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:29:19] 2026-01-10 02:28:47,986 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:29:19] 2026-01-10 02:28:47,986 | INFO     | update_server=False
[2026-01-09 21:29:19] 2026-01-10 02:28:47,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:29:19] 2026-01-10 02:28:47,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:29:19] 2026-01-10 02:28:47,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:29:19] 2026-01-10 02:28:47,987 | INFO     | aborting loop
[2026-01-09 21:29:19] 2026-01-10 02:28:48,993 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:48,993 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:48,993 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:49,072 | INFO     | all data control threads have been joined
[2026-01-09 21:29:19] 2026-01-10 02:28:49,196 | INFO     | [job] validate thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:49,365 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:49,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:29:19] 2026-01-10 02:28:49,493 | INFO     | all job control threads have been joined
[2026-01-09 21:29:19] 2026-01-10 02:28:49,510 | INFO     | all payload control threads have been joined
[2026-01-09 21:29:19] 2026-01-10 02:28:49,668 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:49,806 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:49,993 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,078 | INFO     | [data] control thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,228 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,326 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,370 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,499 | INFO     | [job] control thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,516 | INFO     | [payload] control thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:50,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:29:19] 2026-01-10 02:28:51,831 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:52,521 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:29:19] 2026-01-10 02:28:53,478 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:29:19] 2026-01-10 02:28:53,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321252452160)>', '<ExcThread(monitor, started 140320524195584)>']
[2026-01-09 21:29:19] 2026-01-10 02:28:58,787 | INFO     | all workflow threads have been joined
[2026-01-09 21:29:19] 2026-01-10 02:28:58,788 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:29:19] 2026-01-10 02:28:58,788 | INFO     | traces error code: 0
[2026-01-09 21:29:19] 2026-01-10 02:28:58,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:29:19] 2026-01-10 02:29:18,283 | INFO     | PID=4109479 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:29:19] 2026-01-10 02:29:18,284 | INFO     | .. there are 17 such processes running
[2026-01-09 21:29:19] 2026-01-10 02:29:18,284 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:29:19] 2026-01-10 02:29:18,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:29:19] 2026-01-10 02:29:18,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:29:19] 2026-01-10 02:29:18,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:29:19] 2026-01-10 02:29:18,285 | INFO     | [monitor] control thread has ended
[2026-01-09 21:29:19] 2026-01-10 02:29:18,511 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:29:19] 2026-01-10 02:29:18,513 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:29:19] 2026-01-10 02:29:18,515 [wrapper] pilotpid: 4109479
[2026-01-09 21:29:19] 2026-01-10 02:29:18,518 [wrapper] Pilot exit status: 0
[2026-01-09 21:29:19] 2026-01-10 02:29:18,567 [wrapper] pandaids: 6964539161
[2026-01-09 21:29:19] 2026-01-10 02:29:18,654 [wrapper] cleanup supervisor_pilot  506970 4109480
[2026-01-09 21:29:19] 2026-01-10 02:29:18,657 [wrapper] Test setup, not cleaning
[2026-01-09 21:29:19] 2026-01-10 02:29:18,660 [wrapper] apfmon messages muted
[2026-01-09 21:29:19] 2026-01-10 02:29:18,662 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:29:19] 2026-01-10 02:29:18,664 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:29:19]  *** Error codes and diagnostics ***
[2026-01-09 21:29:19]     "exeErrorCode": 0,
[2026-01-09 21:29:19]     "exeErrorDiag": "",
[2026-01-09 21:29:19]     "pilotErrorCode": 0,
[2026-01-09 21:29:19]     "pilotErrorDiag": "",
[2026-01-09 21:29:19]  *** Listing of results directory ***
[2026-01-09 21:29:19] total 440748
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 21:29:19] -rwx------. 1 boincer umatlas     36322 Jan  9 10:59 runpilot2-wrapper.sh
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:59 queuedata.json
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:29:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:12 run_atlas
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:12 job.xml
[2026-01-09 21:29:19] -rw-r--r--. 2 boincer umatlas 222298398 Jan  9 18:12 EVNT.47898824._001184.pool.root.1
[2026-01-09 21:29:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:12 start_atlas.sh
[2026-01-09 21:29:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:12 shared
[2026-01-09 21:29:19] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 18:12 input.tar.gz
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:12 boinc_lockfile
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 18:12 pandaJob.out
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas        57 Jan  9 18:12 setup.sh.local
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas    989375 Jan  9 18:12 agis_schedconf.cvmfs.json
[2026-01-09 21:29:19] drwx------. 5 boincer umatlas      4096 Jan  9 18:12 pilot3
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas      6872 Jan  9 21:21 init_data.xml
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas       529 Jan  9 21:27 boinc_task_state.xml
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas 221080113 Jan  9 21:27 HITS.47898826._040045.pool.root.1
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas      1041 Jan  9 21:28 memory_monitor_summary.json
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:28 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas    439251 Jan  9 21:28 log.47898826._040045.job.log.tgz.1
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas      7827 Jan  9 21:28 heartbeat.json
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:29 wrapper_checkpoint.txt
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:29 boinc_mmap_file
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas        95 Jan  9 21:29 pilot_heartbeat.json
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas       823 Jan  9 21:29 pilotlog.txt
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas   1575551 Jan  9 21:29 log.47898826._040045.job.log.1
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas       357 Jan  9 21:29 output.list
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:29 runtime_log
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas   2037760 Jan  9 21:29 result.tar.gz
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas       655 Jan  9 21:29 uKNLDmK4Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyemKDmlxNT4m.diag
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 21:29 runtime_log.err
[2026-01-09 21:29:19] -rw-r--r--. 1 boincer umatlas     21491 Jan  9 21:29 stderr.txt
[2026-01-09 21:29:19] HITS file was successfully produced:
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas 221080113 Jan  9 21:27 shared/HITS.pool.root.1
[2026-01-09 21:29:19]  *** Contents of shared directory: ***
[2026-01-09 21:29:19] total 435584
[2026-01-09 21:29:19] -rw-r--r--. 2 boincer umatlas 222298398 Jan  9 18:12 ATLAS.root_0
[2026-01-09 21:29:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:12 start_atlas.sh
[2026-01-09 21:29:19] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 18:12 input.tar.gz
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas 221080113 Jan  9 21:27 HITS.pool.root.1
[2026-01-09 21:29:19] -rw-------. 1 boincer umatlas   2037760 Jan  9 21:29 result.tar.gz
21:29:21 (4104895): run_atlas exited; CPU time 55022.185632
21:29:21 (4104895): called boinc_finish(0)

</stderr_txt>
]]>

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