Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 19:39:28 (181564): vboxwrapper version 26210
2026-01-09 19:39:28 (181564): BOINC client version: 8.2.8
2026-01-09 19:39:30 (181564): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-01-09 19:39:31 (181564): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 19:39:32 (181564): Create VM. (boinc_2da3d96d6a31c1cd, slot#8)
2026-01-09 19:39:35 (181564): Setting Memory Size for VM. (4600MB)
2026-01-09 19:39:37 (181564): Setting CPU Count for VM. (6)
2026-01-09 19:39:38 (181564): Setting Chipset Options for VM.
2026-01-09 19:39:40 (181564): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 19:39:42 (181564): Setting Boot Options for VM.
2026-01-09 19:39:44 (181564): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 19:39:46 (181564): Enabling VM Network Access.
2026-01-09 19:39:47 (181564): Disabling USB Support for VM.
2026-01-09 19:39:48 (181564): Disabling COM Port Support for VM.
2026-01-09 19:39:49 (181564): Disabling LPT Port Support for VM.
2026-01-09 19:39:50 (181564): Disabling Audio Support for VM.
2026-01-09 19:39:51 (181564): Disabling Clipboard Support for VM.
2026-01-09 19:39:51 (181564): Disabling Drag and Drop Support for VM.
2026-01-09 19:39:52 (181564): Adding storage controller(s) to VM.
2026-01-09 19:39:53 (181564): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 19:40:00 (181564): Adding VirtualBox Guest Additions to VM.
2026-01-09 19:40:01 (181564): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 19:40:01 (181564): forwarding host port 55005 to guest port 80
2026-01-09 19:40:02 (181564): Enabling remote desktop for VM.
2026-01-09 19:40:03 (181564): Required extension pack not installed, remote desktop not enabled.
2026-01-09 19:40:03 (181564): Enabling shared directory for VM.
2026-01-09 19:40:05 (181564): Starting VM using VBoxManage interface. (boinc_2da3d96d6a31c1cd, slot#8)
2026-01-09 19:40:13 (181564): Successfully started VM. (PID = '179356')
2026-01-09 19:40:13 (181564): Reporting VM Process ID to BOINC.
2026-01-09 19:40:13 (181564): Guest Log: BIOS: VirtualBox 7.1.12
2026-01-09 19:40:13 (181564): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 19:40:13 (181564): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 19:40:13 (181564): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 19:40:13 (181564): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 19:40:13 (181564): Detected: Web Application Enabled (http://localhost:55005)
2026-01-09 19:40:13 (181564): Preference change detected
2026-01-09 19:40:13 (181564): Setting CPU throttle for VM. (50%)
2026-01-09 19:40:13 (181564): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 19:40:15 (181564): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 19:40:15 (181564): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 19:40:18 (181564): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 19:40:18 (181564): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 19:40:18 (181564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 19:40:27 (181564): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 19:40:27 (181564): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 19:40:53 (181564): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000124 main     Log opened 2026-01-09T19:40:51.489831000Z
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000202 main     OS Product: Linux
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000255 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000278 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000279 main     Process ID: 1348
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000280 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 19:40:53 (181564): Guest Log: 00:00:00.000989 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 19:40:54 (181564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 19:40:54 (181564): Guest Log: [INFO] Mounting shared directory
2026-01-09 19:40:54 (181564): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 19:41:01 (181564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 19:41:01 (181564): Guest Log: [INFO] Detected branch: prod
2026-01-09 19:41:02 (181564): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 19:41:02 (181564): Guest Log: Copying input files
2026-01-09 19:41:03 (181564): Guest Log: Copied input files into RunAtlas.
2026-01-09 19:41:03 (181564): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-09 19:41:03 (181564): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-09 19:41:03 (181564): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-09 19:41:03 (181564): Guest Log: Further information can be found at the LHC@home message board.
2026-01-09 19:41:03 (181564): Guest Log: 00:00:10.011804 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 548 407 000ns (GuestNow=1 768 005 663 042 941 000 ns GuestLast=1 767 987 651 494 534 000 ns fSetTimeLastLoop=true )
2026-01-09 19:41:13 (181564): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 19:41:13 (181564): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 19:41:13 (181564): Guest Log: 2.6.3.0 1631 0 30192 154962 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-09 19:41:16 (181564): Guest Log: copied the webapp to /var/www
2026-01-09 19:41:16 (181564): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-09 19:41:16 (181564): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-09 19:41:16 (181564): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 19:41:16 (181564): Guest Log:  *** Starting ATLAS job. (PandaID=6964539159 taskID=47898826) ***
2026-01-09 21:20:17 (181564): Status Report: Elapsed Time: '6000.000000'
2026-01-09 21:20:17 (181564): Status Report: CPU Time: '19387.078125'
2026-01-09 23:00:21 (181564): Status Report: Elapsed Time: '12000.000000'
2026-01-09 23:00:21 (181564): Status Report: CPU Time: '41092.500000'
2026-01-10 00:34:36 (181564): Guest Log:  *** Job finished ***
2026-01-10 00:34:36 (181564): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:23,833 | INFO     | all workflow threads have been joined
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:23,833 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:23,833 | INFO     | traces error code: 0
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:23,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,470 | INFO     | PID=6044 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,470 | INFO     | found 0 job(s) in 20 queues
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,471 | INFO     | [monitor] control thread has ended
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,586 [wrapper] ==== pilot stdout END ====
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,591 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,594 [wrapper] pilotpid: 6044
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,598 [wrapper] Pilot exit status: 0
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,660 [wrapper] pandaids: 6964539159
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,683 [wrapper] cleanup supervisor_pilot 15927 6045
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,692 [wrapper] Test setup, not cleaning
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,697 [wrapper] apfmon messages muted
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,701 [wrapper] ==== wrapper stdout END ====
2026-01-10 00:34:36 (181564): Guest Log: 2026-01-10 05:34:32,706 [wrapper] ==== wrapper stderr END ====
2026-01-10 00:34:36 (181564): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 00:34:36 (181564): Guest Log:     "exeErrorCode": 0,
2026-01-10 00:34:36 (181564): Guest Log:     "exeErrorDiag": "",
2026-01-10 00:34:36 (181564): Guest Log:     "pilotErrorCode": 0,
2026-01-10 00:34:36 (181564): Guest Log:     "pilotErrorDiag": "",
2026-01-10 00:34:36 (181564): Guest Log:  *** Listing of results directory ***
2026-01-10 00:34:36 (181564): Guest Log: total 221672
2026-01-10 00:34:36 (181564): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 15:55 pilot3.tar.gz
2026-01-10 00:34:36 (181564): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 15:59 runpilot2-wrapper.sh
2026-01-10 00:34:36 (181564): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 15:59 queuedata.json
2026-01-10 00:34:36 (181564): Guest Log: -rwxr-xr-x. 1 atlas atlas      8760 Jan 10 00:41 init_data.xml
2026-01-10 00:34:36 (181564): Guest Log: -rwxr-xr-x. 1 atlas atlas    592396 Jan 10 00:41 input.tar.gz
2026-01-10 00:34:36 (181564): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 00:41 start_atlas.sh
2026-01-10 00:34:36 (181564): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 00:41 EVNT.47898824._001182.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 00:34:36 (181564): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 10 00:41 pandaJob.out
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas    989374 Jan 10 00:41 agis_schedconf.cvmfs.json
2026-01-10 00:34:36 (181564): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 00:41 pilot3
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas 218150404 Jan 10 05:33 HITS.47898826._040043.pool.root.1
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas      1033 Jan 10 05:33 memory_monitor_summary.json
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 05:33 agis_ddmendpoints.agis.ALL.json
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas    463624 Jan 10 05:33 log.47898826._040043.job.log.tgz.1
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 05:34 pilot_heartbeat.json
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas      7794 Jan 10 05:34 heartbeat.json
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas       744 Jan 10 05:34 pilotlog.txt
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas   2036850 Jan 10 05:34 log.47898826._040043.job.log.1
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 05:34 output.list
2026-01-10 00:34:36 (181564): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 05:34 runtime_log
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas   2519040 Jan 10 05:34 result.tar.gz
2026-01-10 00:34:36 (181564): Guest Log: -rw-r--r--. 1 atlas atlas      8740 Jan 10 05:34 runtime_log.err
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas       659 Jan 10 05:34 DqLLDmK4Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxemKDmqEqfem.diag
2026-01-10 00:34:36 (181564): Guest Log: Looking for outputfile HITS.47898826._040043.pool.root.1
2026-01-10 00:34:36 (181564): Guest Log: HITS file was successfully produced
2026-01-10 00:34:36 (181564): Guest Log: -rw-------. 1 atlas atlas 218150404 Jan 10 05:33 /home/atlas/RunAtlas/HITS.47898826._040043.pool.root.1
2026-01-10 00:34:37 (181564): Guest Log: Successfully finished the ATLAS job!
2026-01-10 00:34:37 (181564): Guest Log: Copying the results back to the shared directory!
2026-01-10 00:34:37 (181564): Guest Log:  *** Contents of shared directory: ***
2026-01-10 00:34:37 (181564): Guest Log: total 433360
2026-01-10 00:34:37 (181564): Guest Log: -rwxrwxrwx. 1 root root 222464606 Jan 10 00:39 ATLAS.root_0
2026-01-10 00:34:37 (181564): Guest Log: -rwxrwxrwx. 1 root root 218150404 Jan 10 05:34 HITS.pool.root.1
2026-01-10 00:34:37 (181564): Guest Log: -rwxrwxrwx. 1 root root      8760 Jan 10 00:39 init_data.xml
2026-01-10 00:34:37 (181564): Guest Log: -rwxrwxrwx. 1 root root    592396 Jan  9 21:26 input.tar.gz
2026-01-10 00:34:37 (181564): Guest Log: -rwxrwxrwx. 1 root root   2519040 Jan 10 05:34 result.tar.gz
2026-01-10 00:34:37 (181564): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 21:26 start_atlas.sh
2026-01-10 00:34:37 (181564): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 00:34:37 (181564): VM Completion File Detected.
2026-01-10 00:34:37 (181564): Powering off VM.
2026-01-10 00:34:38 (181564): Successfully stopped VM.
2026-01-10 00:34:38 (181564): Deregistering VM. (boinc_2da3d96d6a31c1cd, slot#8)
2026-01-10 00:34:39 (181564): Removing network bandwidth throttle group from VM.
2026-01-10 00:34:40 (181564): Removing VM from VirtualBox.
2026-01-10 00:34:46 (181564): called boinc_finish(0)

</stderr_txt>
]]>

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