Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:33 (3534132): wrapper (7.7.26015): starting
16:36:33 (3534132): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:36:33] Arguments: --nthreads 8
[2026-01-09 16:36:33] Threads: 8
[2026-01-09 16:36:33] Checking for CVMFS
[2026-01-09 16:36:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:36:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:36:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:36:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:36:36] 2.13.3.0 7558 93958 364748 154957 3 306 28968212 32935937 15442 16776704 0 296591569 99.475 417573744 38644 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:36:36] CVMFS is ok
[2026-01-09 16:36:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:36:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:36:36] Further information can be found at the LHC@home message board.
[2026-01-09 16:36:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:36:36] Checking for apptainer binary...
[2026-01-09 16:36:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:36:36] Running /usr/bin/apptainer --version
[2026-01-09 16:36:36] apptainer version 1.4.5-2.el9
[2026-01-09 16:36:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:36:36] c6-6-39-2.aglt2.org
[2026-01-09 16:36:36] apptainer works
[2026-01-09 16:36:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:36:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:36:36] Starting ATLAS job with PandaID=6963195774
[2026-01-09 16:36:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:41:32]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:41:32] 2026-01-10 14:40:13,896 | INFO     | time since job start (61363s) is within the limit (349056.0s)
[2026-01-10 09:41:32] 2026-01-10 14:40:15,412 | INFO     | monitor loop #3549: job 0:6963195774 is in state 'finished'
[2026-01-10 09:41:32] 2026-01-10 14:40:15,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:41:32] 2026-01-10 14:40:15,903 | INFO     | time since job start (61365s) is within the limit (349056.0s)
[2026-01-10 09:41:32] 2026-01-10 14:40:17,910 | INFO     | time since job start (61367s) is within the limit (349056.0s)
[2026-01-10 09:41:32] 2026-01-10 14:40:17,938 | INFO     | monitor loop #3550: job 0:6963195774 is in state 'finished'
[2026-01-10 09:41:32] 2026-01-10 14:40:17,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:41:32] 2026-01-10 14:40:19,923 | INFO     | time since job start (61369s) is within the limit (349056.0s)
[2026-01-10 09:41:32] 2026-01-10 14:40:20,450 | INFO     | monitor loop #3551: job 0:6963195774 is in state 'finished'
[2026-01-10 09:41:32] 2026-01-10 14:40:20,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:41:32] 2026-01-10 14:40:21,930 | INFO     | time since job start (61371s) is within the limit (349056.0s)
[2026-01-10 09:41:32] 2026-01-10 14:40:22,955 | INFO     | monitor loop #3552: job 0:6963195774 is in state 'finished'
[2026-01-10 09:41:32] 2026-01-10 14:40:22,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:41:32] 2026-01-10 14:40:23,791 | INFO     | PID=3538449 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:41:32] 2026-01-10 14:40:23,791 | INFO     | .. there are 10 such processes running
[2026-01-10 09:41:32] 2026-01-10 14:40:24,793 | INFO     | time since job start (61374s) is within the limit (349056.0s)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,012 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:41:32] 2026-01-10 14:40:25,048 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2879.1263750000007
[2026-01-10 09:41:32] 2026-01-10 14:40:25,098 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963195774/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,099 | INFO     | extracted standard info from prmon json
[2026-01-10 09:41:32] 2026-01-10 14:40:25,109 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:41:32] 2026-01-10 14:40:25,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:41:32] 2026-01-10 14:40:25,174 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:41:32] 2026-01-10 14:40:25,199 | INFO     | sum of square deviations: 313805575291.15875
[2026-01-10 09:41:32] 2026-01-10 14:40:25,283 | INFO     | sum of deviations: 1724532382460.7021
[2026-01-10 09:41:32] 2026-01-10 14:40:25,283 | INFO     | mean x: 1768025366.4571712
[2026-01-10 09:41:32] 2026-01-10 14:40:25,283 | INFO     | mean y: 2768961.3187251
[2026-01-10 09:41:32] 2026-01-10 14:40:25,283 | INFO     | intersect: -9713492436.007843
[2026-01-10 09:41:32] 2026-01-10 14:40:25,284 | INFO     | chi2: 15.228559887669565
[2026-01-10 09:41:32] 2026-01-10 14:40:25,308 | INFO     | sum of square deviations: 309141136325.09906
[2026-01-10 09:41:32] 2026-01-10 14:40:25,400 | INFO     | sum of deviations: 2055148254062.3823
[2026-01-10 09:41:32] 2026-01-10 14:40:25,400 | INFO     | mean x: 1768025213.96997
[2026-01-10 09:41:32] 2026-01-10 14:40:25,400 | INFO     | mean y: 2779765.6126126125
[2026-01-10 09:41:32] 2026-01-10 14:40:25,401 | INFO     | intersect: -11750925919.830477
[2026-01-10 09:41:32] 2026-01-10 14:40:25,421 | INFO     | chi2: 11.855689713932696
[2026-01-10 09:41:32] 2026-01-10 14:40:25,421 | INFO     | current chi2=11.855689713932696 (change=22.148319989652162 %)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,421 | INFO     | right removable region: 998
[2026-01-10 09:41:32] 2026-01-10 14:40:25,422 | INFO     | sum of square deviations: 309139447347.2152
[2026-01-10 09:41:32] 2026-01-10 14:40:25,466 | INFO     | monitor loop #3553: job 0:6963195774 is in state 'finished'
[2026-01-10 09:41:32] 2026-01-10 14:40:25,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,545 | INFO     | sum of deviations: 1362899625469.9114
[2026-01-10 09:41:32] 2026-01-10 14:40:25,545 | INFO     | mean x: 1768025518.971972
[2026-01-10 09:41:32] 2026-01-10 14:40:25,545 | INFO     | mean y: 2780777.5325325327
[2026-01-10 09:41:32] 2026-01-10 14:40:25,545 | INFO     | intersect: -7791893562.173188
[2026-01-10 09:41:32] 2026-01-10 14:40:25,547 | INFO     | chi2: 11.61270128545831
[2026-01-10 09:41:32] 2026-01-10 14:40:25,547 | INFO     | current chi2=11.61270128545831 (change=23.743930016251795 %)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,547 | INFO     | left removable region: 10
[2026-01-10 09:41:32] 2026-01-10 14:40:25,579 | INFO     | sum of square deviations: 299039250990.99567
[2026-01-10 09:41:32] 2026-01-10 14:40:25,733 | INFO     | sum of deviations: 1478303471496.6274
[2026-01-10 09:41:32] 2026-01-10 14:40:25,733 | INFO     | mean x: 1768025488.5030365
[2026-01-10 09:41:32] 2026-01-10 14:40:25,733 | INFO     | mean y: 2802728.624493927
[2026-01-10 09:41:32] 2026-01-10 14:40:25,734 | INFO     | intersect: -8737448621.949078
[2026-01-10 09:41:32] 2026-01-10 14:40:25,756 | INFO     | chi2: 5.692344637014734
[2026-01-10 09:41:32] 2026-01-10 14:40:25,756 | INFO     | current memory leak: 4.94 B/s (using 988 data points, chi2=5.69)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,757 | INFO     | could have reported an average CPU frequency of 2939 MHz (37 samples)
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | ..............................
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . Timing measurements:
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . get job = 0 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . initial setup = 3 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . payload setup = 35 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . stage-in = 0 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . payload execution = 61223 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . stage-out = 7 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | . log creation = 1 s
[2026-01-10 09:41:32] 2026-01-10 14:40:25,758 | INFO     | ..............................
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | 
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | job summary report
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | --------------------------------------------------
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | PanDA job id: 6963195774
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | task id: 47962010
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | errors: (none)
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:41:32] 2026-01-10 14:40:26,431 | INFO     | pilot state: finished 
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | transexitcode: 0
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | exeerrorcode: 0
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | exeerrordiag: 
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | exitcode: 0
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | exitmsg: OK
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | cpuconsumptiontime: 134470 s
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | nevents: 450
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | neventsw: 0
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | pid: 3552784
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | pgrp: 3552784
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | corecount: 8
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | event service: False
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | sizes: {0: 2284449, 1: 2284648, 12: 2284648, 22: 2284676, 25: 2284966, 33: 2284994, 61263: 2337603, 61264: 2337602, 61272: 2346652, 61273: 2346708, 61314: 2346954}
[2026-01-10 09:41:32] 2026-01-10 14:40:26,432 | INFO     | --------------------------------------------------
[2026-01-10 09:41:32] 2026-01-10 14:40:26,433 | INFO     | 
[2026-01-10 09:41:32] 2026-01-10 14:40:26,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 09:41:32] 2026-01-10 14:40:26,689 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,689 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | job 6963195774 has completed (purged errors)
[2026-01-10 09:41:32] 2026-01-10 14:40:26,691 | INFO     | overall cleanup function is called
[2026-01-10 09:41:32] 2026-01-10 14:40:27,725 | INFO     | --- collectZombieJob: --- 10, [3552784]
[2026-01-10 09:41:32] 2026-01-10 14:40:27,725 | INFO     | zombie collector waiting for pid 3552784
[2026-01-10 09:41:32] 2026-01-10 14:40:27,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:41:32] 2026-01-10 14:40:27,725 | INFO     | collected zombie processes
[2026-01-10 09:41:32] 2026-01-10 14:40:27,725 | INFO     | will attempt to kill all subprocesses of pid=3552784
[2026-01-10 09:41:32] 2026-01-10 14:40:29,563 | INFO     | process IDs to be killed: [3552784] (in reverse order)
[2026-01-10 09:41:32] 2026-01-10 14:40:29,708 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:41:32] 2026-01-10 14:40:29,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:41:32] 2026-01-10 14:40:29,746 | INFO     | did not find any defunct processes belonging to 3552784
[2026-01-10 09:41:32] 2026-01-10 14:40:29,780 | INFO     | did not find any defunct processes belonging to 3552784
[2026-01-10 09:41:32] 2026-01-10 14:40:29,780 | INFO     | ready for new job
[2026-01-10 09:41:32] 2026-01-10 14:40:29,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:41:32] 2026-01-10 14:40:29,804 | INFO     | ***************************************
[2026-01-10 09:41:32] 2026-01-10 14:40:29,804 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:41:32] 2026-01-10 14:40:29,804 | INFO     | ***************************************
[2026-01-10 09:41:32] 2026-01-10 14:40:29,804 | INFO     | 
[2026-01-10 09:41:32] 2026-01-10 14:40:29,814 | INFO     | architecture information:
[2026-01-10 09:41:32] 2026-01-10 14:40:29,816 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:41:32] 2026-01-10 14:40:29,957 | INFO     | cat /etc/os-release:
[2026-01-10 09:41:32] NAME="CentOS Linux"
[2026-01-10 09:41:32] VERSION="7 (Core)"
[2026-01-10 09:41:32] ID="centos"
[2026-01-10 09:41:32] ID_LIKE="rhel fedora"
[2026-01-10 09:41:32] VERSION_ID="7"
[2026-01-10 09:41:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:41:32] ANSI_COLOR="0;31"
[2026-01-10 09:41:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:41:32] HOME_URL="https://www.centos.org/"
[2026-01-10 09:41:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:41:32] 
[2026-01-10 09:41:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:41:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:41:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:41:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:41:32] 
[2026-01-10 09:41:32] 2026-01-10 14:40:29,958 | INFO     | ***************************************
[2026-01-10 09:41:32] 2026-01-10 14:40:30,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 09:41:32] 2026-01-10 14:40:30,585 | INFO     | sufficient remaining disk space (74908172288 B)
[2026-01-10 09:41:32] 2026-01-10 14:40:30,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:41:32] 2026-01-10 14:40:30,586 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:41:32] 2026-01-10 14:40:30,586 | INFO     | update_server=False
[2026-01-10 09:41:32] 2026-01-10 14:40:30,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:41:32] 2026-01-10 14:40:30,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:41:32] 2026-01-10 14:40:30,748 | INFO     | all payload control threads have been joined
[2026-01-10 09:41:32] 2026-01-10 14:40:31,036 | INFO     | all data control threads have been joined
[2026-01-10 09:41:32] 2026-01-10 14:40:31,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:41:32] 2026-01-10 14:40:31,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:41:32] 2026-01-10 14:40:31,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:41:32] 2026-01-10 14:40:31,588 | INFO     | aborting loop
[2026-01-10 09:41:32] 2026-01-10 14:40:31,592 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:31,658 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:31,711 | INFO     | [job] validate thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:31,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:31,753 | INFO     | [payload] control thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:31,812 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,044 | INFO     | [data] control thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,178 | INFO     | all job control threads have been joined
[2026-01-10 09:41:32] 2026-01-10 14:40:32,439 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,590 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,596 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,601 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,794 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:32,813 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:33,186 | INFO     | [job] control thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:40:35,520 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:41:32] 2026-01-10 14:41:00,733 | INFO     | PID=3538449 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:41:32] 2026-01-10 14:41:00,734 | INFO     | .. there are 10 such processes running
[2026-01-10 09:41:32] 2026-01-10 14:41:00,735 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:41:32] 2026-01-10 14:41:00,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:41:32] 2026-01-10 14:41:00,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:41:32] 2026-01-10 14:41:22,034 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:41:32] 2026-01-10 14:41:23,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732762560320)>', '<ExcThread(monitor, started 139732480657152)>']
[2026-01-10 09:41:32] 2026-01-10 14:41:23,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:41:32] 2026-01-10 14:41:23,982 | INFO     | [monitor] control thread has ended
[2026-01-10 09:41:32] 2026-01-10 14:41:28,354 | INFO     | all workflow threads have been joined
[2026-01-10 09:41:32] 2026-01-10 14:41:28,354 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:41:32] 2026-01-10 14:41:28,358 | INFO     | traces error code: 0
[2026-01-10 09:41:32] 2026-01-10 14:41:28,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:41:32] 2026-01-10 14:41:29,768 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:41:32] 2026-01-10 14:41:29,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:41:32] 2026-01-10 14:41:29,930 [wrapper] pilotpid: 3538449
[2026-01-10 09:41:32] 2026-01-10 14:41:29,983 [wrapper] Pilot exit status: 0
[2026-01-10 09:41:32] 2026-01-10 14:41:30,198 [wrapper] pandaids: 6963195774
[2026-01-10 09:41:32] 2026-01-10 14:41:31,006 [wrapper] cleanup supervisor_pilot 2794489 3538450
[2026-01-10 09:41:32] 2026-01-10 14:41:31,064 [wrapper] Test setup, not cleaning
[2026-01-10 09:41:32] 2026-01-10 14:41:31,123 [wrapper] apfmon messages muted
[2026-01-10 09:41:32] 2026-01-10 14:41:31,173 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:41:32] 2026-01-10 14:41:31,213 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:41:32]  *** Error codes and diagnostics ***
[2026-01-10 09:41:32]     "exeErrorCode": 0,
[2026-01-10 09:41:32]     "exeErrorDiag": "",
[2026-01-10 09:41:32]     "pilotErrorCode": 0,
[2026-01-10 09:41:32]     "pilotErrorDiag": "",
[2026-01-10 09:41:32]  *** Listing of results directory ***
[2026-01-10 09:41:32] total 795940
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 09:41:32] -rwx------. 1 boincer umatlas     36322 Jan  9 02:13 runpilot2-wrapper.sh
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:41:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:36 run_atlas
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:36 job.xml
[2026-01-10 09:41:32] -rw-r--r--. 2 boincer umatlas 392494414 Jan  9 16:36 EVNT.47962006._000057.pool.root.1
[2026-01-10 09:41:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:36 start_atlas.sh
[2026-01-10 09:41:32] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:36 shared
[2026-01-10 09:41:32] -rw-r--r--. 2 boincer umatlas    592610 Jan  9 16:36 input.tar.gz
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:36 boinc_lockfile
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 16:36 pandaJob.out
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas        57 Jan  9 16:36 setup.sh.local
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas    989398 Jan  9 16:37 agis_schedconf.cvmfs.json
[2026-01-10 09:41:32] drwx------. 5 boincer umatlas      4096 Jan  9 16:37 pilot3
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas       533 Jan 10 09:10 boinc_task_state.xml
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas 399537840 Jan 10 09:38 HITS.47962010._000605.pool.root.1
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas      6843 Jan 10 09:39 init_data.xml
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas      1060 Jan 10 09:39 memory_monitor_summary.json
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas   1987891 Jan 10 09:39 log.47962010._000605.job.log.tgz.1
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas      8623 Jan 10 09:40 heartbeat.json
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas        95 Jan 10 09:41 pilot_heartbeat.json
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:41 boinc_mmap_file
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas        29 Jan 10 09:41 wrapper_checkpoint.txt
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas      4824 Jan 10 09:41 pilotlog.txt
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas   7558925 Jan 10 09:41 log.47962010._000605.job.log.1
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas       353 Jan 10 09:41 output.list
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:41 runtime_log
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas   9564160 Jan 10 09:41 result.tar.gz
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 09:41 runtime_log.err
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas       661 Jan 10 09:41 9ZuKDm4rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzQmKDmjMSiOm.diag
[2026-01-10 09:41:32] -rw-r--r--. 1 boincer umatlas     21793 Jan 10 09:41 stderr.txt
[2026-01-10 09:41:32] HITS file was successfully produced:
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas 399537840 Jan 10 09:38 shared/HITS.pool.root.1
[2026-01-10 09:41:32]  *** Contents of shared directory: ***
[2026-01-10 09:41:32] total 783412
[2026-01-10 09:41:32] -rw-r--r--. 2 boincer umatlas 392494414 Jan  9 16:36 ATLAS.root_0
[2026-01-10 09:41:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:36 start_atlas.sh
[2026-01-10 09:41:32] -rw-r--r--. 2 boincer umatlas    592610 Jan  9 16:36 input.tar.gz
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas 399537840 Jan 10 09:38 HITS.pool.root.1
[2026-01-10 09:41:32] -rw-------. 1 boincer umatlas   9564160 Jan 10 09:41 result.tar.gz
09:41:34 (3534132): run_atlas exited; CPU time 135457.812502
09:41:34 (3534132): called boinc_finish(0)

</stderr_txt>
]]>

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