Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:25 (1224460): wrapper (7.7.26015): starting
16:30:25 (1224460): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:30:25] Arguments: --nthreads 8
[2026-01-09 16:30:25] Threads: 8
[2026-01-09 16:30:25] Checking for CVMFS
[2026-01-09 16:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:30:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:30:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:30:27] 2.13.3.0 11888 93905 410300 154957 2 347 22102300 32935937 21572 16776704 0 358773969 99.486 494344628 36049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:30:27] CVMFS is ok
[2026-01-09 16:30:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:30:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:30:27] Further information can be found at the LHC@home message board.
[2026-01-09 16:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:30:27] Checking for apptainer binary...
[2026-01-09 16:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:30:27] Running /usr/bin/apptainer --version
[2026-01-09 16:30:27] apptainer version 1.4.5-2.el9
[2026-01-09 16:30:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:30:28] c6-2-11-3.aglt2.org
[2026-01-09 16:30:28] apptainer works
[2026-01-09 16:30:28] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:30:28] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:30:28] Starting ATLAS job with PandaID=6964003049
[2026-01-09 16:30:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:09:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:09:08] 2026-01-10 02:08:17,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:09:08] 2026-01-10 02:08:18,372 | INFO     | PID=1228978 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:09:08] 2026-01-10 02:08:18,373 | INFO     | .. there are 17 such processes running
[2026-01-09 21:09:08] 2026-01-10 02:08:19,374 | INFO     | time since job start (16608s) is within the limit (349056.0s)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,355 | INFO     | monitor loop #1064: job 0:6964003049 is in state 'finished'
[2026-01-09 21:09:08] 2026-01-10 02:08:20,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,887 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:09:08] 2026-01-10 02:08:20,899 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2702.157552083332
[2026-01-09 21:09:08] 2026-01-10 02:08:20,916 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6964003049/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,916 | INFO     | extracted standard info from prmon json
[2026-01-09 21:09:08] 2026-01-10 02:08:20,916 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:09:08] 2026-01-10 02:08:20,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:09:08] 2026-01-10 02:08:20,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:09:08] 2026-01-10 02:08:20,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:09:08] 2026-01-10 02:08:20,921 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:09:08] 2026-01-10 02:08:20,922 | INFO     | sum of square deviations: 6103272089.218527
[2026-01-09 21:09:08] 2026-01-10 02:08:20,924 | INFO     | sum of deviations: 14022768238.037056
[2026-01-09 21:09:08] 2026-01-10 02:08:20,924 | INFO     | mean x: 1768002624.774074
[2026-01-09 21:09:08] 2026-01-10 02:08:20,924 | INFO     | mean y: 2494900.1481481483
[2026-01-09 21:09:08] 2026-01-10 02:08:20,924 | INFO     | intersect: -4059636148.415751
[2026-01-09 21:09:08] 2026-01-10 02:08:20,924 | INFO     | chi2: 4.023696819224102
[2026-01-09 21:09:08] 2026-01-10 02:08:20,925 | INFO     | sum of square deviations: 5770444284.890601
[2026-01-09 21:09:08] 2026-01-10 02:08:20,926 | INFO     | sum of deviations: 31088559890.90943
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | mean x: 1768002472.2754717
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | mean y: 2502602.124528302
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | intersect: -9522699970.324188
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | chi2: 3.338692788369636
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | current chi2=3.338692788369636 (change=17.024245653442573 %)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | right removable region: 264
[2026-01-09 21:09:08] 2026-01-10 02:08:20,927 | INFO     | sum of square deviations: 5770415371.33588
[2026-01-09 21:09:08] 2026-01-10 02:08:20,929 | INFO     | sum of deviations: -59535508545.739624
[2026-01-09 21:09:08] 2026-01-10 02:08:20,929 | INFO     | mean x: 1768002777.2792454
[2026-01-09 21:09:08] 2026-01-10 02:08:20,929 | INFO     | mean y: 2528525.9018867924
[2026-01-09 21:09:08] 2026-01-10 02:08:20,929 | INFO     | intersect: 18243666759.80894
[2026-01-09 21:09:08] 2026-01-10 02:08:20,930 | INFO     | chi2: 1.1467287651102873
[2026-01-09 21:09:08] 2026-01-10 02:08:20,930 | INFO     | current chi2=1.1467287651102873 (change=71.50061705366227 %)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,930 | INFO     | sum of square deviations: 5449933445.6115465
[2026-01-09 21:09:08] 2026-01-10 02:08:20,932 | INFO     | sum of deviations: -70877707960.6962
[2026-01-09 21:09:08] 2026-01-10 02:08:20,932 | INFO     | mean x: 1768002929.773077
[2026-01-09 21:09:08] 2026-01-10 02:08:20,932 | INFO     | mean y: 2533889.1576923076
[2026-01-09 21:09:08] 2026-01-10 02:08:20,932 | INFO     | intersect: 22995841345.236164
[2026-01-09 21:09:08] 2026-01-10 02:08:20,932 | INFO     | chi2: 1.0254157487405946
[2026-01-09 21:09:08] 2026-01-10 02:08:20,933 | INFO     | current chi2=1.0254157487405946 (change=10.57905060557414 %)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,933 | INFO     | left removable region: 20
[2026-01-09 21:09:08] 2026-01-10 02:08:20,933 | INFO     | sum of square deviations: 4504425818.04918
[2026-01-09 21:09:08] 2026-01-10 02:08:20,934 | INFO     | sum of deviations: -49605370464.18849
[2026-01-09 21:09:08] 2026-01-10 02:08:20,934 | INFO     | mean x: 1768003051.7786884
[2026-01-09 21:09:08] 2026-01-10 02:08:20,934 | INFO     | mean y: 2541089.848360656
[2026-01-09 21:09:08] 2026-01-10 02:08:20,935 | INFO     | intersect: 19472824297.504936
[2026-01-09 21:09:08] 2026-01-10 02:08:20,935 | INFO     | chi2: 0.28209660577668055
[2026-01-09 21:09:08] 2026-01-10 02:08:20,935 | INFO     | current memory leak: -11.01 B/s (using 244 data points, chi2=0.28)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,935 | INFO     | could have reported an average CPU frequency of 2691 MHz (13 samples)
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | ..............................
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . Timing measurements:
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . get job = 0 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . initial setup = 7 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . payload setup = 38 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . stage-in = 0 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . payload execution = 16465 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . stage-out = 4 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | . log creation = 0 s
[2026-01-09 21:09:08] 2026-01-10 02:08:20,936 | INFO     | ..............................
[2026-01-09 21:09:08] 2026-01-10 02:08:21,382 | INFO     | time since job start (16610s) is within the limit (349056.0s)
[2026-01-09 21:09:08] 2026-01-10 02:08:21,449 | INFO     | 
[2026-01-09 21:09:08] 2026-01-10 02:08:21,449 | INFO     | job summary report
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | --------------------------------------------------
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | PanDA job id: 6964003049
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | task id: 47898826
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | errors: (none)
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | pilot state: finished 
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | transexitcode: 0
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | exeerrorcode: 0
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | exeerrordiag: 
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | exitcode: 0
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | exitmsg: OK
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | cpuconsumptiontime: 58442 s
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | nevents: 400
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | neventsw: 0
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | pid: 1237571
[2026-01-09 21:09:08] 2026-01-10 02:08:21,450 | INFO     | pgrp: 1237571
[2026-01-09 21:09:08] 2026-01-10 02:08:21,451 | INFO     | corecount: 8
[2026-01-09 21:09:08] 2026-01-10 02:08:21,451 | INFO     | event service: False
[2026-01-09 21:09:08] 2026-01-10 02:08:21,451 | INFO     | sizes: {0: 2283692, 1: 2283776, 2: 2283975, 13: 2283975, 24: 2284031, 27: 2284321, 35: 2284477, 16508: 2316377, 16509: 2316376, 16514: 2325430, 16515: 2325486, 165
[2026-01-09 21:09:08] 2026-01-10 02:08:21,451 | INFO     | --------------------------------------------------
[2026-01-09 21:09:08] 2026-01-10 02:08:21,451 | INFO     | 
[2026-01-09 21:09:08] 2026-01-10 02:08:21,451 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:09:08] 2026-01-10 02:08:21,547 | INFO     | job 6964003049 has completed (purged errors)
[2026-01-09 21:09:08] 2026-01-10 02:08:21,548 | INFO     | overall cleanup function is called
[2026-01-09 21:09:08] 2026-01-10 02:08:22,582 | INFO     | --- collectZombieJob: --- 10, [1237571]
[2026-01-09 21:09:08] 2026-01-10 02:08:22,583 | INFO     | zombie collector waiting for pid 1237571
[2026-01-09 21:09:08] 2026-01-10 02:08:22,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:09:08] 2026-01-10 02:08:22,584 | INFO     | collected zombie processes
[2026-01-09 21:09:08] 2026-01-10 02:08:22,584 | INFO     | will attempt to kill all subprocesses of pid=1237571
[2026-01-09 21:09:08] 2026-01-10 02:08:24,229 | INFO     | process IDs to be killed: [1237571] (in reverse order)
[2026-01-09 21:09:08] 2026-01-10 02:08:24,378 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:09:08] 2026-01-10 02:08:24,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:09:08] 2026-01-10 02:08:24,400 | INFO     | did not find any defunct processes belonging to 1237571
[2026-01-09 21:09:08] 2026-01-10 02:08:24,430 | INFO     | did not find any defunct processes belonging to 1237571
[2026-01-09 21:09:08] 2026-01-10 02:08:24,431 | INFO     | ready for new job
[2026-01-09 21:09:08] 2026-01-10 02:08:24,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:09:08] 2026-01-10 02:08:24,437 | INFO     | ***************************************
[2026-01-09 21:09:08] 2026-01-10 02:08:24,437 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:09:08] 2026-01-10 02:08:24,437 | INFO     | ***************************************
[2026-01-09 21:09:08] 2026-01-10 02:08:24,437 | INFO     | 
[2026-01-09 21:09:08] 2026-01-10 02:08:24,446 | INFO     | architecture information:
[2026-01-09 21:09:08] 2026-01-10 02:08:24,446 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:09:08] 2026-01-10 02:08:24,503 | INFO     | cat /etc/os-release:
[2026-01-09 21:09:08] NAME="CentOS Linux"
[2026-01-09 21:09:08] VERSION="7 (Core)"
[2026-01-09 21:09:08] ID="centos"
[2026-01-09 21:09:08] ID_LIKE="rhel fedora"
[2026-01-09 21:09:08] VERSION_ID="7"
[2026-01-09 21:09:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:09:08] ANSI_COLOR="0;31"
[2026-01-09 21:09:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:09:08] HOME_URL="https://www.centos.org/"
[2026-01-09 21:09:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:09:08] 
[2026-01-09 21:09:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:09:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:09:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:09:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:09:08] 
[2026-01-09 21:09:08] 2026-01-10 02:08:24,504 | INFO     | ***************************************
[2026-01-09 21:09:08] 2026-01-10 02:08:25,006 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 21:09:08] 2026-01-10 02:08:25,052 | INFO     | sufficient remaining disk space (73482108928 B)
[2026-01-09 21:09:08] 2026-01-10 02:08:25,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:09:08] 2026-01-10 02:08:25,052 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:09:08] 2026-01-10 02:08:25,052 | INFO     | update_server=False
[2026-01-09 21:09:08] 2026-01-10 02:08:25,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:09:08] 2026-01-10 02:08:25,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:09:08] 2026-01-10 02:08:25,204 | INFO     | all job control threads have been joined
[2026-01-09 21:09:08] 2026-01-10 02:08:25,436 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 21:09:08] 2026-01-10 02:08:25,436 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 21:09:08] 2026-01-10 02:08:25,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:09:08] 2026-01-10 02:08:25,437 | INFO     | will abort loop
[2026-01-09 21:09:08] 2026-01-10 02:08:26,013 | INFO     | all data control threads have been joined
[2026-01-09 21:09:08] 2026-01-10 02:08:26,058 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,113 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,154 | INFO     | [job] validate thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:09:08] 2026-01-10 02:08:26,209 | INFO     | [job] control thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,310 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,317 | INFO     | all payload control threads have been joined
[2026-01-09 21:09:08] 2026-01-10 02:08:26,442 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,500 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,649 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:26,732 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,018 | INFO     | [data] control thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,068 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,113 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,163 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,322 | INFO     | [payload] control thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,394 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:27,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:09:08] 2026-01-10 02:08:31,512 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:09:08] 2026-01-10 02:08:55,686 | INFO     | PID=1228978 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:09:08] 2026-01-10 02:08:55,687 | INFO     | .. there are 17 such processes running
[2026-01-09 21:09:08] 2026-01-10 02:08:55,689 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:09:08] 2026-01-10 02:08:55,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:09:08] 2026-01-10 02:08:55,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:09:08] 2026-01-10 02:08:59,441 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:09:08] 2026-01-10 02:09:01,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291898185536)>', '<ExcThread(monitor, started 140291407341312)>']
[2026-01-09 21:09:08] 2026-01-10 02:09:01,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:09:08] 2026-01-10 02:09:01,731 | INFO     | [monitor] control thread has ended
[2026-01-09 21:09:08] 2026-01-10 02:09:06,462 | INFO     | all workflow threads have been joined
[2026-01-09 21:09:08] 2026-01-10 02:09:06,462 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:09:08] 2026-01-10 02:09:06,463 | INFO     | traces error code: 0
[2026-01-09 21:09:08] 2026-01-10 02:09:06,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:09:08] 2026-01-10 02:09:07,605 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:09:08] 2026-01-10 02:09:07,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:09:08] 2026-01-10 02:09:07,632 [wrapper] pilotpid: 1228978
[2026-01-09 21:09:08] 2026-01-10 02:09:07,650 [wrapper] Pilot exit status: 0
[2026-01-09 21:09:08] 2026-01-10 02:09:07,781 [wrapper] pandaids: 6964003049
[2026-01-09 21:09:08] 2026-01-10 02:09:08,006 [wrapper] cleanup supervisor_pilot 1862251 1228979
[2026-01-09 21:09:08] 2026-01-10 02:09:08,027 [wrapper] Test setup, not cleaning
[2026-01-09 21:09:08] 2026-01-10 02:09:08,042 [wrapper] apfmon messages muted
[2026-01-09 21:09:08] 2026-01-10 02:09:08,091 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:09:08] 2026-01-10 02:09:08,108 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:09:08]  *** Error codes and diagnostics ***
[2026-01-09 21:09:08]     "exeErrorCode": 0,
[2026-01-09 21:09:08]     "exeErrorDiag": "",
[2026-01-09 21:09:08]     "pilotErrorCode": 0,
[2026-01-09 21:09:08]     "pilotErrorDiag": "",
[2026-01-09 21:09:08]  *** Listing of results directory ***
[2026-01-09 21:09:08] total 442792
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-09 21:09:08] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:09:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:30 run_atlas
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:30 job.xml
[2026-01-09 21:09:08] -rw-r--r--. 2 boincer umatlas 223929952 Jan  9 16:30 EVNT.47898824._001035.pool.root.1
[2026-01-09 21:09:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:30 start_atlas.sh
[2026-01-09 21:09:08] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:30 shared
[2026-01-09 21:09:08] -rw-r--r--. 2 boincer umatlas    610542 Jan  9 16:30 input.tar.gz
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:30 boinc_lockfile
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 16:30 pandaJob.out
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas        57 Jan  9 16:30 setup.sh.local
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas    989398 Jan  9 16:31 agis_schedconf.cvmfs.json
[2026-01-09 21:09:08] drwx------. 7 boincer umatlas      4096 Jan  9 16:31 pilot3
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas      6876 Jan  9 21:03 init_data.xml
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas 220243660 Jan  9 21:06 HITS.47898826._039895.pool.root.1
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:06 boinc_task_state.xml
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas      1037 Jan  9 21:07 memory_monitor_summary.json
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas    493946 Jan  9 21:07 log.47898826._039895.job.log.tgz.1
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas      7825 Jan  9 21:08 heartbeat.json
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas        95 Jan  9 21:08 pilot_heartbeat.json
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:08 wrapper_checkpoint.txt
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:08 boinc_mmap_file
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas      5010 Jan  9 21:09 pilotlog.txt
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas   2150406 Jan  9 21:09 log.47898826._039895.job.log.1
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas       357 Jan  9 21:09 output.list
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:09 runtime_log
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas   2662400 Jan  9 21:09 result.tar.gz
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 21:09 runtime_log.err
[2026-01-09 21:09:08] -rw-------. 1 boincer umatlas       657 Jan  9 21:09 iYkMDm6sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYVmKDmbnDMvn.diag
[2026-01-09 21:09:08] -rw-r--r--. 1 boincer umatlas     21510 Jan  9 21:09 stderr.txt
[2026-01-09 21:09:09] HITS file was successfully produced:
[2026-01-09 21:09:09] -rw-------. 1 boincer umatlas 220243660 Jan  9 21:06 shared/HITS.pool.root.1
[2026-01-09 21:09:09]  *** Contents of shared directory: ***
[2026-01-09 21:09:09] total 436992
[2026-01-09 21:09:09] -rw-r--r--. 2 boincer umatlas 223929952 Jan  9 16:30 ATLAS.root_0
[2026-01-09 21:09:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:30 start_atlas.sh
[2026-01-09 21:09:09] -rw-r--r--. 2 boincer umatlas    610542 Jan  9 16:30 input.tar.gz
[2026-01-09 21:09:09] -rw-------. 1 boincer umatlas 220243660 Jan  9 21:06 HITS.pool.root.1
[2026-01-09 21:09:09] -rw-------. 1 boincer umatlas   2662400 Jan  9 21:09 result.tar.gz
21:09:10 (1224460): run_atlas exited; CPU time 59169.521341
21:09:10 (1224460): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN