Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:35:49 (1534825): wrapper (7.7.26015): starting
16:35:49 (1534825): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:35:49] Arguments: --nthreads 8
[2026-01-09 16:35:49] Threads: 8
[2026-01-09 16:35:49] Checking for CVMFS
[2026-01-09 16:35:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:35:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:35:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:35:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:35:50] 2.13.3.0 2033223 17450 201864 154957 0 512 36216260 40960001 23407 16776704 0 70351320 99.625 74255539 35870 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 16:35:50] CVMFS is ok
[2026-01-09 16:35:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:35:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:35:50] Further information can be found at the LHC@home message board.
[2026-01-09 16:35:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:35:50] Checking for apptainer binary...
[2026-01-09 16:35:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:35:50] Running /usr/bin/apptainer --version
[2026-01-09 16:35:50] apptainer version 1.4.5-2.el9
[2026-01-09 16:35:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:35:51] c-212-17.aglt2.org
[2026-01-09 16:35:51] apptainer works
[2026-01-09 16:35:51] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:35:51] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:35:51] Starting ATLAS job with PandaID=6963165902
[2026-01-09 16:35:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:38:29]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:38:29] 2026-01-09 23:37:38,732 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3251.588447916667
[2026-01-09 18:38:29] 2026-01-09 23:37:38,749 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963165902/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,749 | INFO     | extracted standard info from prmon json
[2026-01-09 18:38:29] 2026-01-09 23:37:38,749 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:38:29] 2026-01-09 23:37:38,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:38:29] 2026-01-09 23:37:38,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:38:29] 2026-01-09 23:37:38,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:38:29] 2026-01-09 23:37:38,752 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:38:29] 2026-01-09 23:37:38,752 | INFO     | sum of square deviations: 522508100.87395
[2026-01-09 18:38:29] 2026-01-09 23:37:38,752 | INFO     | sum of deviations: 7578566575.781515
[2026-01-09 18:38:29] 2026-01-09 23:37:38,752 | INFO     | mean x: 1767998207.2268908
[2026-01-09 18:38:29] 2026-01-09 23:37:38,753 | INFO     | mean y: 2513971.193277311
[2026-01-09 18:38:29] 2026-01-09 23:37:38,753 | INFO     | intersect: -25640901120.209698
[2026-01-09 18:38:29] 2026-01-09 23:37:38,753 | INFO     | chi2: 1.6552479956952804
[2026-01-09 18:38:29] 2026-01-09 23:37:38,753 | INFO     | sum of square deviations: 459372886.57017535
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | sum of deviations: 7401733203.324561
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | mean x: 1767998054.7280703
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | mean y: 2513559.4298245613
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | intersect: -28484692123.953262
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | chi2: 1.657749034980893
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | current chi2=1.657749034980893 (change=-0.15109755711029124 %)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | right removable region: 113
[2026-01-09 18:38:29] 2026-01-09 23:37:38,754 | INFO     | sum of square deviations: 459363798.1052632
[2026-01-09 18:38:29] 2026-01-09 23:37:38,755 | INFO     | sum of deviations: -11735332909.421057
[2026-01-09 18:38:29] 2026-01-09 23:37:38,755 | INFO     | mean x: 1767998359.7368422
[2026-01-09 18:38:29] 2026-01-09 23:37:38,755 | INFO     | mean y: 2559789.052631579
[2026-01-09 18:38:29] 2026-01-09 23:37:38,755 | INFO     | intersect: 45169482869.19444
[2026-01-09 18:38:29] 2026-01-09 23:37:38,755 | INFO     | chi2: 0.05983322573124993
[2026-01-09 18:38:29] 2026-01-09 23:37:38,755 | INFO     | current chi2=0.05983322573124993 (change=96.38524100999638 %)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,756 | INFO     | sum of square deviations: 401521920.3119272
[2026-01-09 18:38:29] 2026-01-09 23:37:38,756 | INFO     | sum of deviations: -11528458582.761461
[2026-01-09 18:38:29] 2026-01-09 23:37:38,756 | INFO     | mean x: 1767998512.2477064
[2026-01-09 18:38:29] 2026-01-09 23:37:38,756 | INFO     | mean y: 2559132.9541284405
[2026-01-09 18:38:29] 2026-01-09 23:37:38,756 | INFO     | intersect: 50765161600.578636
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | chi2: 0.04470749144507191
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | current chi2=0.04470749144507191 (change=25.279824213585883 %)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | sum of square deviations: 348769112.46153814
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | sum of deviations: -9616949279.269232
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | mean x: 1767998664.7307692
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | mean y: 2553595.9903846155
[2026-01-09 18:38:29] 2026-01-09 23:37:38,757 | INFO     | intersect: 48753296930.25448
[2026-01-09 18:38:29] 2026-01-09 23:37:38,758 | INFO     | chi2: 0.0441295137397676
[2026-01-09 18:38:29] 2026-01-09 23:37:38,758 | INFO     | current chi2=0.0441295137397676 (change=1.2927983356311206 %)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,758 | INFO     | left removable region: 30
[2026-01-09 18:38:29] 2026-01-09 23:37:38,758 | INFO     | sum of square deviations: 177299692.91566285
[2026-01-09 18:38:29] 2026-01-09 23:37:38,759 | INFO     | sum of deviations: -2939825502.578314
[2026-01-09 18:38:29] 2026-01-09 23:37:38,759 | INFO     | mean x: 1767998939.1927712
[2026-01-09 18:38:29] 2026-01-09 23:37:38,759 | INFO     | mean y: 2531047.0361445784
[2026-01-09 18:38:29] 2026-01-09 23:37:38,759 | INFO     | intersect: 29317913857.330635
[2026-01-09 18:38:29] 2026-01-09 23:37:38,759 | INFO     | chi2: 0.026750130566726295
[2026-01-09 18:38:29] 2026-01-09 23:37:38,759 | INFO     | current memory leak: -16.58 B/s (using 83 data points, chi2=0.03)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | could have reported an average CPU frequency of 3307 MHz (8 samples)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | ..............................
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . Timing measurements:
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . get job = 0 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . initial setup = 2 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . payload setup = 10 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . stage-in = 0 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . payload execution = 7241 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . stage-out = 1 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | . log creation = 0 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,760 | INFO     | ..............................
[2026-01-09 18:38:29] 2026-01-09 23:37:38,843 | INFO     | 
[2026-01-09 18:38:29] 2026-01-09 23:37:38,843 | INFO     | job summary report
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | --------------------------------------------------
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | PanDA job id: 6963165902
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | task id: 47898826
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | errors: (none)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | pilot state: finished 
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | transexitcode: 0
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | exeerrorcode: 0
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | exeerrordiag: 
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | exitcode: 0
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | exitmsg: OK
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | cpuconsumptiontime: 43651 s
[2026-01-09 18:38:29] 2026-01-09 23:37:38,844 | INFO     | nevents: 400
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | neventsw: 0
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | pid: 1546320
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | pgrp: 1546320
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | corecount: 8
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | event service: False
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | sizes: {0: 2283744, 1: 2283999, 10: 2284261, 12: 2284289, 7256: 2311829, 7257: 2311828, 7258: 2321010, 7262: 2321066, 7270: 2321260}
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | --------------------------------------------------
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | 
[2026-01-09 18:38:29] 2026-01-09 23:37:38,845 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 18:38:29] 2026-01-09 23:37:38,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:38:29] 2026-01-09 23:37:38,929 | INFO     | job 6963165902 has completed (purged errors)
[2026-01-09 18:38:29] 2026-01-09 23:37:38,930 | INFO     | overall cleanup function is called
[2026-01-09 18:38:29] 2026-01-09 23:37:39,938 | INFO     | --- collectZombieJob: --- 10, [1546320]
[2026-01-09 18:38:29] 2026-01-09 23:37:39,938 | INFO     | zombie collector waiting for pid 1546320
[2026-01-09 18:38:29] 2026-01-09 23:37:39,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:38:29] 2026-01-09 23:37:39,938 | INFO     | collected zombie processes
[2026-01-09 18:38:29] 2026-01-09 23:37:39,938 | INFO     | will attempt to kill all subprocesses of pid=1546320
[2026-01-09 18:38:29] 2026-01-09 23:37:40,663 | INFO     | process IDs to be killed: [1546320] (in reverse order)
[2026-01-09 18:38:29] 2026-01-09 23:37:40,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:38:29] 2026-01-09 23:37:40,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:38:29] 2026-01-09 23:37:40,837 | INFO     | did not find any defunct processes belonging to 1546320
[2026-01-09 18:38:29] 2026-01-09 23:37:40,856 | INFO     | did not find any defunct processes belonging to 1546320
[2026-01-09 18:38:29] 2026-01-09 23:37:40,856 | INFO     | ready for new job
[2026-01-09 18:38:29] 2026-01-09 23:37:40,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:38:29] 2026-01-09 23:37:40,858 | INFO     | ***************************************
[2026-01-09 18:38:29] 2026-01-09 23:37:40,858 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:38:29] 2026-01-09 23:37:40,858 | INFO     | ***************************************
[2026-01-09 18:38:29] 2026-01-09 23:37:40,858 | INFO     | 
[2026-01-09 18:38:29] 2026-01-09 23:37:40,863 | INFO     | architecture information:
[2026-01-09 18:38:29] 2026-01-09 23:37:40,864 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:38:29] 2026-01-09 23:37:40,880 | INFO     | cat /etc/os-release:
[2026-01-09 18:38:29] NAME="CentOS Linux"
[2026-01-09 18:38:29] VERSION="7 (Core)"
[2026-01-09 18:38:29] ID="centos"
[2026-01-09 18:38:29] ID_LIKE="rhel fedora"
[2026-01-09 18:38:29] VERSION_ID="7"
[2026-01-09 18:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:38:29] ANSI_COLOR="0;31"
[2026-01-09 18:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:38:29] HOME_URL="https://www.centos.org/"
[2026-01-09 18:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:38:29] 
[2026-01-09 18:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:38:29] 
[2026-01-09 18:38:29] 2026-01-09 23:37:40,880 | INFO     | ***************************************
[2026-01-09 18:38:29] 2026-01-09 23:37:41,385 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 18:38:29] 2026-01-09 23:37:41,422 | INFO     | sufficient remaining disk space (127156617216 B)
[2026-01-09 18:38:29] 2026-01-09 23:37:41,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:38:29] 2026-01-09 23:37:41,423 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:38:29] 2026-01-09 23:37:41,423 | INFO     | update_server=False
[2026-01-09 18:38:29] 2026-01-09 23:37:41,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:38:29] 2026-01-09 23:37:41,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:38:29] 2026-01-09 23:37:41,615 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:38:29] 2026-01-09 23:37:41,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:38:29] 2026-01-09 23:37:41,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:38:29] 2026-01-09 23:37:41,615 | INFO     | will abort loop
[2026-01-09 18:38:29] 2026-01-09 23:37:42,220 | INFO     | all data control threads have been joined
[2026-01-09 18:38:29] 2026-01-09 23:37:42,429 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:42,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:38:29] 2026-01-09 23:37:42,616 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:42,621 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:42,658 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:42,666 | INFO     | all job control threads have been joined
[2026-01-09 18:38:29] 2026-01-09 23:37:42,819 | INFO     | all payload control threads have been joined
[2026-01-09 18:38:29] 2026-01-09 23:37:43,003 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,085 | INFO     | [job] validate thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,227 | INFO     | [data] control thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,644 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,663 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,671 | INFO     | [job] control thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,825 | INFO     | [payload] control thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:43,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:38:29] 2026-01-09 23:37:43,868 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:44,589 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:44,868 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:45,432 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:37:51,953 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:38:29] 2026-01-09 23:37:52,959 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:38:29] 2026-01-09 23:38:11,260 | INFO     | PID=1539514 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:38:29] 2026-01-09 23:38:11,260 | INFO     | .. there are 26 such processes running
[2026-01-09 18:38:29] 2026-01-09 23:38:11,260 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:38:29] 2026-01-09 23:38:11,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:38:29] 2026-01-09 23:38:11,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:38:29] 2026-01-09 23:38:22,894 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:38:29] 2026-01-09 23:38:24,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790435288896)>', '<ExcThread(monitor, started 139790062163712)>']
[2026-01-09 18:38:29] 2026-01-09 23:38:24,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:38:29] 2026-01-09 23:38:24,356 | INFO     | [monitor] control thread has ended
[2026-01-09 18:38:29] 2026-01-09 23:38:29,071 | INFO     | all workflow threads have been joined
[2026-01-09 18:38:29] 2026-01-09 23:38:29,071 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:38:29] 2026-01-09 23:38:29,071 | INFO     | traces error code: 0
[2026-01-09 18:38:29] 2026-01-09 23:38:29,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:38:29] 2026-01-09 23:38:29,387 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:38:29] 2026-01-09 23:38:29,390 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:38:29] 2026-01-09 23:38:29,392 [wrapper] pilotpid: 1539514
[2026-01-09 18:38:29] 2026-01-09 23:38:29,397 [wrapper] Pilot exit status: 0
[2026-01-09 18:38:29] 2026-01-09 23:38:29,454 [wrapper] pandaids: 6963165902
[2026-01-09 18:38:29] 2026-01-09 23:38:29,575 [wrapper] cleanup supervisor_pilot 2129617 1539515
[2026-01-09 18:38:29] 2026-01-09 23:38:29,579 [wrapper] Test setup, not cleaning
[2026-01-09 18:38:29] 2026-01-09 23:38:29,583 [wrapper] apfmon messages muted
[2026-01-09 18:38:29] 2026-01-09 23:38:29,587 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:38:29] 2026-01-09 23:38:29,590 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:38:29]  *** Error codes and diagnostics ***
[2026-01-09 18:38:29]     "exeErrorCode": 0,
[2026-01-09 18:38:29]     "exeErrorDiag": "",
[2026-01-09 18:38:29]     "pilotErrorCode": 0,
[2026-01-09 18:38:29]     "pilotErrorDiag": "",
[2026-01-09 18:38:29]  *** Listing of results directory ***
[2026-01-09 18:38:29] total 445676
[2026-01-09 18:38:29] -rwx------. 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:38:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:35 run_atlas
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:35 job.xml
[2026-01-09 18:38:29] -rw-r--r--. 2 boincer umatlas 224698677 Jan  9 16:35 EVNT.47898824._001356.pool.root.1
[2026-01-09 18:38:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:35 start_atlas.sh
[2026-01-09 18:38:29] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:35 shared
[2026-01-09 18:38:29] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 16:35 input.tar.gz
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:35 boinc_lockfile
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 16:35 pandaJob.out
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas        57 Jan  9 16:35 setup.sh.local
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas    989398 Jan  9 16:36 agis_schedconf.cvmfs.json
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:38:29] drwx------. 5 boincer umatlas      4096 Jan  9 16:36 pilot3
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas 225012757 Jan  9 18:36 HITS.47898826._035015.pool.root.1
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas       529 Jan  9 18:36 boinc_task_state.xml
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas      1054 Jan  9 18:37 memory_monitor_summary.json
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas        95 Jan  9 18:37 pilot_heartbeat.json
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas    370466 Jan  9 18:37 log.47898826._035015.job.log.tgz.1
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas      7821 Jan  9 18:37 heartbeat.json
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas      6956 Jan  9 18:37 init_data.xml
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 18:38 boinc_mmap_file
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas        27 Jan  9 18:38 wrapper_checkpoint.txt
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas      5083 Jan  9 18:38 pilotlog.txt
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas    999186 Jan  9 18:38 log.47898826._035015.job.log.1
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas       357 Jan  9 18:38 output.list
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:38 runtime_log
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas   1392640 Jan  9 18:38 result.tar.gz
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas       658 Jan  9 18:38 SVRNDmEzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxWgKDm7Zcp8m.diag
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 18:38 runtime_log.err
[2026-01-09 18:38:29] -rw-r--r--. 1 boincer umatlas     21196 Jan  9 18:38 stderr.txt
[2026-01-09 18:38:29] HITS file was successfully produced:
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas 225012757 Jan  9 18:36 shared/HITS.pool.root.1
[2026-01-09 18:38:29]  *** Contents of shared directory: ***
[2026-01-09 18:38:29] total 441140
[2026-01-09 18:38:29] -rw-r--r--. 2 boincer umatlas 224698677 Jan  9 16:35 ATLAS.root_0
[2026-01-09 18:38:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:35 start_atlas.sh
[2026-01-09 18:38:29] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 16:35 input.tar.gz
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas 225012757 Jan  9 18:36 HITS.pool.root.1
[2026-01-09 18:38:29] -rw-------. 1 boincer umatlas   1392640 Jan  9 18:38 result.tar.gz
18:38:31 (1534825): run_atlas exited; CPU time 43837.544197
18:38:31 (1534825): called boinc_finish(0)

</stderr_txt>
]]>

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